RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W HPM1P40481 377 aa5.11□□□□□ -1.59
CIT3YPR001W YDR366CP87287 132 aa5.11□□□□□ -1.59
CIT3YPR001W CNL1Q06333 122 aa5.11□□□□□ -1.59
CIT3YPR001W CBP6P07253 162 aaPredicted RBP5.1□□□□□ -1.59
CIT3YPR001W CCA1P21269 546 aa5.1□□□□□ -1.59
CIT3YPR001W NSG1P38837 291 aa5.1□□□□□ -1.59
CIT3YPR001W SER2P42941 309 aa5.1□□□□□ -1.59
CIT3YPR001W YFR054CP43622 192 aa5.1□□□□□ -1.59
CIT3YPR001W ALB1P47019 175 aaPredicted RBP5.1□□□□□ -1.59
CIT3YPR001W CAB4P53332 305 aa5.1□□□□□ -1.59
CIT3YPR001W HHO1P53551 258 aa5.1□□□□□ -1.59
CIT3YPR001W NKP2Q06162 153 aa5.1□□□□□ -1.59
CIT3YPR001W XRN1P22147 1528 aaKnown RBP5.1□□□□□ -1.59
CIT3YPR001W YOR304C-AO14468 76 aa5.09□□□□□ -1.59
CIT3YPR001W RPS20P38701 121 aaKnown RBP5.09□□□□□ -1.59
CIT3YPR001W RSM27P53305 110 aa5.09□□□□□ -1.59
CIT3YPR001W ATG39Q06159 398 aa5.09□□□□□ -1.59
CIT3YPR001W SNT2P53127 1403 aa5.09□□□□□ -1.59
CIT3YPR001W PRE7P23724 241 aaKnown RBP5.08□□□□□ -1.6
CIT3YPR001W UTP11P34247 250 aaPredicted RBP5.08□□□□□ -1.6
CIT3YPR001W SHE2P36068 246 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
CIT3YPR001W MRPL24P36525 258 aaPredicted RBP5.08□□□□□ -1.6
CIT3YPR001W VMA7P39111 118 aa5.08□□□□□ -1.6
CIT3YPR001W ERJ5P43613 295 aaPredicted RBP5.08□□□□□ -1.6
CIT3YPR001W YGR039WP53225 103 aa5.08□□□□□ -1.6
CIT3YPR001W ALG9P53868 555 aaKnown RBP5.08□□□□□ -1.6
CIT3YPR001W AKR2Q12013 749 aa5.08□□□□□ -1.6
CIT3YPR001W GEP5Q12393 293 aa5.08□□□□□ -1.6
CIT3YPR001W TOP2P06786 1428 aaKnown RBP5.08□□□□□ -1.6
CIT3YPR001W REP2P03872 296 aa5.07□□□□□ -1.6
CIT3YPR001W SGA1P08019 549 aa5.07□□□□□ -1.6
CIT3YPR001W TFC1P32367 649 aa5.07□□□□□ -1.6
CIT3YPR001W MRP49P32388 137 aa5.07□□□□□ -1.6
CIT3YPR001W ECM34P38728 170 aa5.07□□□□□ -1.6
CIT3YPR001W DIG2Q03373 323 aaKnown RBP5.07□□□□□ -1.6
CIT3YPR001W YOL014WQ08110 124 aa5.07□□□□□ -1.6
CIT3YPR001W PSF1Q12488 208 aa5.07□□□□□ -1.6
CIT3YPR001W YML100W-AQ8TGT0 57 aa5.07□□□□□ -1.6
CIT3YPR001W FLO11P08640 1367 aa5.07□□□□□ -1.6
CIT3YPR001W MON2P48563 1636 aaPredicted RBP5.07□□□□□ -1.6
CIT3YPR001W PEP1P32319 1579 aa5.07□□□□□ -1.6
CIT3YPR001W RPS1BP23248 255 aaKnown RBP5.07□□□□□ -1.6
CIT3YPR001W FIP1P45976 327 aa5.07□□□□□ -1.6
CIT3YPR001W APJ1P53940 528 aa5.07□□□□□ -1.6
CIT3YPR001W RUB1Q03919 77 aa5.07□□□□□ -1.6
CIT3YPR001W YLR412C-AQ3E742 68 aa5.07□□□□□ -1.6
CIT3YPR001W COX4P04037 155 aa5.06□□□□□ -1.6
CIT3YPR001W ATP15P21306 62 aa5.06□□□□□ -1.6
CIT3YPR001W COX10P21592 462 aa5.06□□□□□ -1.6
CIT3YPR001W TOM40P23644 387 aaKnown RBP5.06□□□□□ -1.6
CIT3YPR001W RSA4P25382 515 aaKnown RBP5.06□□□□□ -1.6
CIT3YPR001W UGX2P32772 223 aa5.06□□□□□ -1.6
CIT3YPR001W SWD3P38123 315 aa5.06□□□□□ -1.6
CIT3YPR001W SLM2P53955 656 aa5.06□□□□□ -1.6
CIT3YPR001W YIR021W-AQ3E739 70 aa5.06□□□□□ -1.6
CIT3YPR001W VMA11P32842 164 aa5.05□□□□□ -1.6
CIT3YPR001W PAN3P36102 679 aaPredicted RBP5.05□□□□□ -1.6
CIT3YPR001W MRPL27P36526 146 aaPredicted RBP5.05□□□□□ -1.6
CIT3YPR001W YOL085CQ99345 113 aa5.05□□□□□ -1.6
CIT3YPR001W ATP5P09457 212 aa5.04□□□□□ -1.6
CIT3YPR001W TIR1P10863 254 aa5.04□□□□□ -1.6
CIT3YPR001W PGD1P40356 397 aa5.04□□□□□ -1.6
CIT3YPR001W YFL019CP43576 117 aa5.04□□□□□ -1.6
CIT3YPR001W YGR219WP53307 113 aa5.04□□□□□ -1.6
CIT3YPR001W APS2Q00381 147 aa5.04□□□□□ -1.6
CIT3YPR001W CGI121Q03705 181 aaKnown RBP5.04□□□□□ -1.6
CIT3YPR001W RPL9AP05738 191 aaKnown RBP5.03□□□□□ -1.6
CIT3YPR001W FCY21P40039 528 aa5.03□□□□□ -1.6
CIT3YPR001W PRE5P40302 234 aaKnown RBP5.03□□□□□ -1.6
CIT3YPR001W RPL9BP51401 191 aaKnown RBP5.03□□□□□ -1.6
CIT3YPR001W RSM10Q03201 203 aa5.03□□□□□ -1.6
CIT3YPR001W VPS71Q03433 280 aa5.03□□□□□ -1.6
CIT3YPR001W SRB8P25648 1427 aa5.03□□□□□ -1.6
CIT3YPR001W MMS1Q06211 1407 aa5.03□□□□□ -1.6
CIT3YPR001W PHO85P17157 305 aa5.02□□□□□ -1.61
CIT3YPR001W KRE9P39005 276 aa5.02□□□□□ -1.61
CIT3YPR001W RGI1P40043 161 aaPredicted RBP5.02□□□□□ -1.61
CIT3YPR001W YER134CP40081 178 aa5.02□□□□□ -1.61
CIT3YPR001W YER181CP40097 107 aa5.02□□□□□ -1.61
CIT3YPR001W AYR1P40471 297 aa5.02□□□□□ -1.61
CIT3YPR001W GLR1P41921 483 aaKnown RBP5.02□□□□□ -1.61
CIT3YPR001W NAT3Q06504 195 aa5.02□□□□□ -1.61
CIT3YPR001W YOR289WQ12012 251 aaPredicted RBP5.02□□□□□ -1.61
CIT3YPR001W GSP1P32835 219 aaKnown RBP5.01□□□□□ -1.61
CIT3YPR001W GSP2P32836 220 aaKnown RBP5.01□□□□□ -1.61
CIT3YPR001W FMP46P36141 133 aaKnown RBP5.01□□□□□ -1.61
CIT3YPR001W LDB18Q07887 179 aa5.01□□□□□ -1.61
CIT3YPR001W FCY1Q12178 158 aa5.01□□□□□ -1.61
CIT3YPR001W BUD4P47136 1447 aa5.01□□□□□ -1.61
CIT3YPR001W FKS1P38631 1876 aaKnown RBP5.01□□□□□ -1.61
CIT3YPR001W MYO4P32492 1471 aa5.01□□□□□ -1.61
CIT3YPR001W PTC1P35182 281 aa5□□□□□ -1.61
CIT3YPR001W YHR125WP38831 101 aa5□□□□□ -1.61
CIT3YPR001W ARC15P40518 154 aaRIP-Chip data5□□□□□ -1.61not detected
CIT3YPR001W SPG3Q04398 127 aaPredicted RBP5□□□□□ -1.61
CIT3YPR001W TRM732Q03496 1420 aa5□□□□□ -1.61
CIT3YPR001W FMP49A0A023PZB3 126 aa5□□□□□ -1.61
CIT3YPR001W SRP21P32342 167 aa5□□□□□ -1.61
CIT3YPR001W YNL200CP40165 246 aaKnown RBP5□□□□□ -1.61
CIT3YPR001W GPI2P46961 280 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms