RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C ECM4P36156 370 aa1.5□□□□□ -2.17
CUP9YPL177C UBC12P52491 188 aa1.5□□□□□ -2.17
CUP9YPL177C MPC3P53311 146 aa1.5□□□□□ -2.17
CUP9YPL177C YIP3P53633 176 aa1.5□□□□□ -2.17
CUP9YPL177C CUE4Q04201 117 aaPredicted RBP1.5□□□□□ -2.17
CUP9YPL177C GRX8Q05926 109 aa1.5□□□□□ -2.17
CUP9YPL177C YOL024WQ08172 172 aa1.5□□□□□ -2.17
CUP9YPL177C CMC2Q3E7A4 109 aa1.5□□□□□ -2.17
CUP9YPL177C IGO2Q9P305 131 aa1.5□□□□□ -2.17
CUP9YPL177C UBR2Q07963 1872 aa1.5□□□□□ -2.17
CUP9YPL177C MBF1O14467 151 aaKnown RBP1.49□□□□□ -2.17
CUP9YPL177C SNF4P12904 322 aa1.49□□□□□ -2.17
CUP9YPL177C SEC11P15367 167 aa1.49□□□□□ -2.17
CUP9YPL177C TRR1P29509 319 aaKnown RBP1.49□□□□□ -2.17
CUP9YPL177C OPY1P38271 328 aa1.49□□□□□ -2.17
CUP9YPL177C MPA43P53583 542 aaPredicted RBP1.49□□□□□ -2.17
CUP9YPL177C FUS2Q05670 677 aa1.49□□□□□ -2.17
CUP9YPL177C YLR036CQ07986 203 aa1.49□□□□□ -2.17
CUP9YPL177C YDL180WQ12301 547 aa1.49□□□□□ -2.17
CUP9YPL177C MSB2P32334 1306 aa1.48□□□□□ -2.17
CUP9YPL177C POR1P04840 283 aaKnown RBP1.48□□□□□ -2.17
CUP9YPL177C GCY1P14065 312 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
CUP9YPL177C TRX3P25372 127 aa1.48□□□□□ -2.17
CUP9YPL177C OCH1P31755 480 aa1.48□□□□□ -2.17
CUP9YPL177C YKR041WP36134 250 aa1.48□□□□□ -2.17
CUP9YPL177C TVP38P36164 337 aa1.48□□□□□ -2.17
CUP9YPL177C TVP23P38962 199 aa1.48□□□□□ -2.17
CUP9YPL177C SRP14P38985 146 aa1.48□□□□□ -2.17
CUP9YPL177C ARP3P47117 449 aaKnown RBP1.48□□□□□ -2.17
CUP9YPL177C JAC1P53193 184 aa1.48□□□□□ -2.17
CUP9YPL177C YNL140CP53910 189 aa1.48□□□□□ -2.17
CUP9YPL177C SMD2Q06217 110 aaKnown RBP1.48□□□□□ -2.17
CUP9YPL177C SPO13P23624 291 aa1.47□□□□□ -2.17
CUP9YPL177C AHC2P25649 128 aa1.47□□□□□ -2.17
CUP9YPL177C YCR090CP25654 182 aaKnown RBP1.47□□□□□ -2.17
CUP9YPL177C MGT1P26188 188 aa1.47□□□□□ -2.17
CUP9YPL177C ARC19P33204 171 aaKnown RBP1.47□□□□□ -2.17
CUP9YPL177C CLG1P35190 452 aa1.47□□□□□ -2.17
CUP9YPL177C PAN3P36102 679 aaPredicted RBP1.47□□□□□ -2.17
CUP9YPL177C MAK5P38112 773 aaPredicted RBP1.47□□□□□ -2.17
CUP9YPL177C YER076CP40049 302 aa1.47□□□□□ -2.17
CUP9YPL177C FMP32P43557 207 aa1.47□□□□□ -2.17
CUP9YPL177C SKI6P46948 246 aaPredicted RBP1.47□□□□□ -2.17
CUP9YPL177C YNL247WP53852 767 aaKnown RBP1.47□□□□□ -2.17
CUP9YPL177C YLR460CP54007 376 aa1.47□□□□□ -2.17
CUP9YPL177C YMR315WQ04869 349 aaKnown RBP1.47□□□□□ -2.17
CUP9YPL177C YLR031WQ07978 186 aa1.47□□□□□ -2.17
CUP9YPL177C ODC2Q99297 307 aa1.47□□□□□ -2.17
CUP9YPL177C FMP23P38231 175 aa1.46□□□□□ -2.18
CUP9YPL177C AIM2P39721 246 aa1.46□□□□□ -2.18
CUP9YPL177C YEA4P40004 342 aa1.46□□□□□ -2.18
CUP9YPL177C YJR111CP47148 283 aaKnown RBP1.46□□□□□ -2.18
CUP9YPL177C TDA4P47153 279 aa1.46□□□□□ -2.18
CUP9YPL177C ARO8P53090 500 aaKnown RBP1.46□□□□□ -2.18
CUP9YPL177C UBC7Q02159 165 aa1.46□□□□□ -2.18
CUP9YPL177C DGA1Q08650 418 aa1.46□□□□□ -2.18
CUP9YPL177C YLR050CQ12155 161 aaKnown RBP1.46□□□□□ -2.18
CUP9YPL177C CYR1P08678 2026 aaKnown RBP1.45□□□□□ -2.18
CUP9YPL177C ARO7P32178 256 aa1.45□□□□□ -2.18
CUP9YPL177C FES1P38260 290 aa1.45□□□□□ -2.18
CUP9YPL177C YER121WP40076 114 aa1.45□□□□□ -2.18
CUP9YPL177C YPL073CP40323 161 aa1.45□□□□□ -2.18
CUP9YPL177C SER2P42941 309 aa1.45□□□□□ -2.18
CUP9YPL177C PGA1P53896 198 aa1.45□□□□□ -2.18
CUP9YPL177C YMR099CQ03161 297 aaKnown RBP1.45□□□□□ -2.18
CUP9YPL177C AIM34Q03673 198 aa1.45□□□□□ -2.18
CUP9YPL177C YNL146C-AQ3E7Z1 64 aa1.45□□□□□ -2.18
CUP9YPL177C RPS24AP0CX31 135 aaKnown RBP1.44□□□□□ -2.18
CUP9YPL177C RPS24BP0CX32 135 aaKnown RBP1.44□□□□□ -2.18
CUP9YPL177C NVJ1P38881 321 aa1.44□□□□□ -2.18
CUP9YPL177C HPT1Q04178 221 aaKnown RBP1.44□□□□□ -2.18
CUP9YPL177C DYN3Q04949 312 aa1.44□□□□□ -2.18
CUP9YPL177C YOL014WQ08110 124 aa1.44□□□□□ -2.18
CUP9YPL177C BRX1Q08235 291 aaKnown RBP1.44□□□□□ -2.18
CUP9YPL177C MPD1Q12404 318 aaKnown RBP1.44□□□□□ -2.18
CUP9YPL177C SEC14P24280 304 aaKnown RBP1.43□□□□□ -2.18
CUP9YPL177C YKL102CP34249 101 aa1.43□□□□□ -2.18
CUP9YPL177C YER134CP40081 178 aa1.43□□□□□ -2.18
CUP9YPL177C RIO2P40160 425 aaKnown RBP1.43□□□□□ -2.18
CUP9YPL177C TMA22P47089 198 aaPredicted RBP1.43□□□□□ -2.18
CUP9YPL177C GPI17Q04080 534 aa1.43□□□□□ -2.18
CUP9YPL177C SHH4Q06236 168 aa1.43□□□□□ -2.18
CUP9YPL177C YHR007C-AQ07074 71 aa1.43□□□□□ -2.18
CUP9YPL177C YPR014CQ6B0W2 109 aa1.43□□□□□ -2.18
CUP9YPL177C YAR023CD6VPM8 179 aa1.42□□□□□ -2.18
CUP9YPL177C QCR2P07257 368 aa1.42□□□□□ -2.18
CUP9YPL177C NAT3Q06504 195 aa1.42□□□□□ -2.18
CUP9YPL177C YPR174CQ06616 221 aaPredicted RBP1.42□□□□□ -2.18
CUP9YPL177C PEX11Q12462 236 aa1.42□□□□□ -2.18
CUP9YPL177C YML100W-AQ8TGT0 57 aa1.42□□□□□ -2.18
CUP9YPL177C EFM5P53200 248 aaKnown RBP1.41□□□□□ -2.18
CUP9YPL177C PLP1Q04004 230 aa1.41□□□□□ -2.18
CUP9YPL177C YOR342CQ12182 319 aa1.41□□□□□ -2.18
CUP9YPL177C YLR412C-AQ3E742 68 aa1.41□□□□□ -2.18
CUP9YPL177C CMD1P06787 147 aaKnown RBP1.4□□□□□ -2.19
CUP9YPL177C AME1P38313 324 aa1.4□□□□□ -2.19
CUP9YPL177C NSG1P38837 291 aa1.4□□□□□ -2.19
CUP9YPL177C MTW1P39731 289 aa1.4□□□□□ -2.19
CUP9YPL177C RFC2P40348 353 aa1.4□□□□□ -2.19
CUP9YPL177C FLX1P40464 311 aa1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 32.4 ms