RNA–Protein interactions for RNA: YPL135W

ISU1, Transcript of Conserved protein of the mitochondrial matrix, yeast

Gene ISU1, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ISU1	YPL135W	YLR422W	Q06409	1932 aa		2.1	□□□□□ -2.07
ISU1	YPL135W	HAP2	P06774	265 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	SEC4	P07560	215 aa	Known RBP	2.09	□□□□□ -2.07
ISU1	YPL135W	DSF1	P0CX08	502 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	YNR073C	P0CX09	502 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	PET54	P10834	293 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	ZWF1	P11412	505 aa	Known RBP	2.09	□□□□□ -2.07
ISU1	YPL135W	YCR025C	P25352	136 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	CAM1	P29547	415 aa	Known RBP	2.09	□□□□□ -2.07
ISU1	YPL135W	HYM1	P32464	399 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	SEC17	P32602	292 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	TIP20	P33891	701 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	YKR041W	P36134	250 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	HMT1	P38074	348 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	ECM33	P38248	429 aa	Known RBP	2.09	□□□□□ -2.07
ISU1	YPL135W	DER1	P38307	211 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	OM14	P38325	134 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	NVJ1	P38881	321 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	SEN34	P39707	275 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	PEX17	P40155	199 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	RRG9	P40156	214 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	YMR144W	P40214	342 aa	Known RBP	2.09	□□□□□ -2.07
ISU1	YPL135W	AVT7	P40501	490 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	BXI1	P48558	297 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	HAL1	Q01766	294 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	YDR249C	Q03787	373 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	YML096W	Q04489	525 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	NOC4	Q06512	552 aa	Predicted RBP	2.09	□□□□□ -2.07
ISU1	YPL135W	YPR147C	Q06522	304 aa	Known RBP	2.09	□□□□□ -2.07
ISU1	YPL135W	FEX1	Q08913	375 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	FEX2	Q08991	375 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	YLR050C	Q12155	161 aa	Known RBP	2.09	□□□□□ -2.07
ISU1	YPL135W	MDM32	Q12171	622 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	ATP14	Q12349	124 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	SUS1	Q6WNK7	96 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	PET20	Q99373	253 aa		2.09	□□□□□ -2.07
ISU1	YPL135W	YEL009C-A	A0A023PZF2	135 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	YMR316C-A	I2HB70	103 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	CDC28	P00546	298 aa	Known RBP	2.08	□□□□□ -2.08
ISU1	YPL135W	SPS2	P08459	502 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	DPM1	P14020	267 aa	Known RBP	2.08	□□□□□ -2.08
ISU1	YPL135W	RPS1B	P23248	255 aa	Known RBP	2.08	□□□□□ -2.08
ISU1	YPL135W	CNB1	P25296	175 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	CAT2	P32796	670 aa	Known RBP	2.08	□□□□□ -2.08
ISU1	YPL135W	SRP102	P36057	244 aa	Predicted RBP	2.08	□□□□□ -2.08
ISU1	YPL135W	YBR063C	P38083	404 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	ECM31	P38122	312 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	ICE2	P40499	491 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	YGR201C	P42936	225 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	IGD1	P43598	195 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	PGU1	P47180	361 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	YGL034C	P53186	121 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	ERV29	P53337	310 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	AAH1	P53909	347 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	ABF2	Q02486	183 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	YPL113C	Q02961	396 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	MET31	Q03081	177 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	YDR115W	Q04598	105 aa		2.08	□□□□□ -2.08
ISU1	YPL135W	SYC1	Q08553	188 aa	Predicted RBP	2.08	□□□□□ -2.08
ISU1	YPL135W	YOR283W	Q12040	230 aa	Known RBP	2.08	□□□□□ -2.08
ISU1	YPL135W	IPP1	P00817	287 aa	Known RBP	2.07	□□□□□ -2.08
ISU1	YPL135W	REP2	P03872	296 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	SIR2	P06700	562 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	MRS1	P07266	363 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	PET9	P18239	318 aa	Known RBP	2.07	□□□□□ -2.08
ISU1	YPL135W	CKS1	P20486	150 aa	Known RBP	2.07	□□□□□ -2.08
ISU1	YPL135W	PRE7	P23724	241 aa	Known RBP	2.07	□□□□□ -2.08
ISU1	YPL135W	RNP1	P32385	249 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	LHP1	P33399	275 aa	Known RBP	2.07	□□□□□ -2.08
ISU1	YPL135W	APS1	P35181	156 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	MRPL39	P36533	70 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	SOL2	P37262	315 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	POP8	P38208	133 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	ECM14	P38836	430 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	TVP23	P38962	199 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	HPA3	P39979	161 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	YER076C	P40049	302 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	PFS2	P42841	465 aa	Known RBP	2.07	□□□□□ -2.08
ISU1	YPL135W	MOG1	P47123	218 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	PET191	Q02772	108 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	YDR248C	Q03786	193 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	RNH202	Q05635	350 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	NNT1	Q05874	261 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	MSA1	Q08471	629 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	YPL278C	Q08990	100 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	PST1	Q12355	444 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	PEX11	Q12462	236 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	RAX2	Q12465	1220 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	PSF1	Q12488	208 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	RPL21B	Q12672	160 aa	Known RBP	2.07	□□□□□ -2.08
ISU1	YPL135W	YAL063C-A	Q3E791	96 aa		2.07	□□□□□ -2.08
ISU1	YPL135W	YHR139C-A	O13536	103 aa		2.06	□□□□□ -2.08
ISU1	YPL135W	BGL2	P15703	313 aa	Known RBP	2.06	□□□□□ -2.08
ISU1	YPL135W	AHC2	P25649	128 aa		2.06	□□□□□ -2.08
ISU1	YPL135W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.06	□□□□□ -2.08	not detected
ISU1	YPL135W	TCA17	P32613	152 aa		2.06	□□□□□ -2.08
ISU1	YPL135W	TMA19	P35691	167 aa	Known RBP	2.06	□□□□□ -2.08
ISU1	YPL135W	SWM2	P40342	146 aa		2.06	□□□□□ -2.08
ISU1	YPL135W	TIR3	P40552	269 aa		2.06	□□□□□ -2.08
ISU1	YPL135W	UFE1	P41834	346 aa		2.06	□□□□□ -2.08

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms