RNA–Protein interactions for RNA: YOR332W

VMA4, Transcript of Subunit E of the V1 domain of the vacuolar H+-ATPase (V-ATPase), yeast

Gene VMA4, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA4	YOR332W	SPO13	P23624	291 aa		5.08	□□□□□ -1.6
VMA4	YOR332W	COQ3	P27680	312 aa		5.08	□□□□□ -1.6
VMA4	YOR332W	CPR5	P35176	225 aa		5.08	□□□□□ -1.6
VMA4	YOR332W	NSA2	P40078	261 aa	Known RBP	5.08	□□□□□ -1.6
VMA4	YOR332W	PIG2	P40187	538 aa		5.08	□□□□□ -1.6
VMA4	YOR332W	CCS1	P40202	249 aa	Known RBP	5.08	□□□□□ -1.6
VMA4	YOR332W	PRM5	P40476	318 aa		5.08	□□□□□ -1.6
VMA4	YOR332W	YGR149W	P48236	432 aa		5.08	□□□□□ -1.6
VMA4	YOR332W	YPL039W	Q03080	316 aa		5.08	□□□□□ -1.6
VMA4	YOR332W	ATC1	Q04005	294 aa		5.08	□□□□□ -1.6
VMA4	YOR332W	YOR186W	Q08560	144 aa		5.08	□□□□□ -1.6
VMA4	YOR332W	ERG27	Q12452	347 aa	Known RBP	5.08	□□□□□ -1.6
VMA4	YOR332W	YBR255C-A	Q3E776	120 aa		5.08	□□□□□ -1.6
VMA4	YOR332W	YIL046W-A	Q3E7Z4	54 aa		5.08	□□□□□ -1.6
VMA4	YOR332W	COX15	P40086	486 aa		5.07	□□□□□ -1.6
VMA4	YOR332W	GPP2	P40106	250 aa	Known RBP	5.07	□□□□□ -1.6
VMA4	YOR332W	CFD1	P40558	293 aa		5.07	□□□□□ -1.6
VMA4	YOR332W	TRM9	P49957	279 aa		5.07	□□□□□ -1.6
VMA4	YOR332W	RIB4	P50861	169 aa	Predicted RBP	5.07	□□□□□ -1.6
VMA4	YOR332W	HCH1	P53834	153 aa		5.07	□□□□□ -1.6
VMA4	YOR332W	PDR17	P53844	350 aa		5.07	□□□□□ -1.6
VMA4	YOR332W	TSA2	Q04120	196 aa		5.07	□□□□□ -1.6
VMA4	YOR332W	PIN3	Q06449	215 aa		5.07	□□□□□ -1.6
VMA4	YOR332W	FLO9	P39712	1322 aa		5.06	□□□□□ -1.6
VMA4	YOR332W	RPL25	P04456	142 aa	Known RBP	5.06	□□□□□ -1.6
VMA4	YOR332W	ILV5	P06168	395 aa	Known RBP	5.06	□□□□□ -1.6
VMA4	YOR332W	PDX1	P16451	410 aa		5.06	□□□□□ -1.6
VMA4	YOR332W	CWP1	P28319	239 aa		5.06	□□□□□ -1.6
VMA4	YOR332W	YUH1	P35127	236 aa		5.06	□□□□□ -1.6
VMA4	YOR332W	SHB17	P36136	271 aa	Known RBP	5.06	□□□□□ -1.6
VMA4	YOR332W	SWD3	P38123	315 aa		5.06	□□□□□ -1.6
VMA4	YOR332W	RTC3	P38804	111 aa	Predicted RBP	5.06	□□□□□ -1.6
VMA4	YOR332W	IRC22	P40006	225 aa		5.06	□□□□□ -1.6
VMA4	YOR332W	YGR269W	P40326	108 aa		5.06	□□□□□ -1.6
VMA4	YOR332W	RTS2	P40962	232 aa		5.06	□□□□□ -1.6
VMA4	YOR332W	PGU1	P47180	361 aa		5.06	□□□□□ -1.6
VMA4	YOR332W	LST7	P53237	242 aa		5.06	□□□□□ -1.6
VMA4	YOR332W	TRS23	Q03784	219 aa		5.06	□□□□□ -1.6
VMA4	YOR332W	YML053C	Q04978	212 aa		5.06	□□□□□ -1.6
VMA4	YOR332W	PAM18	Q07914	168 aa		5.06	□□□□□ -1.6
VMA4	YOR332W	RFU1	Q08003	200 aa		5.06	□□□□□ -1.6
VMA4	YOR332W	YOL118C	Q08259	102 aa		5.06	□□□□□ -1.6
VMA4	YOR332W	USB1	Q12208	290 aa	Known RBP	5.06	□□□□□ -1.6
VMA4	YOR332W	QCR9	P22289	66 aa		5.05	□□□□□ -1.6
VMA4	YOR332W	SHO1	P40073	367 aa		5.05	□□□□□ -1.6
VMA4	YOR332W	LOC1	P43586	204 aa	Predicted RBP	5.05	□□□□□ -1.6
VMA4	YOR332W	YOR292C	Q08743	309 aa		5.05	□□□□□ -1.6
VMA4	YOR332W	FYV7	Q12247	151 aa		5.05	□□□□□ -1.6
VMA4	YOR332W	ATP5	P09457	212 aa		5.04	□□□□□ -1.6
VMA4	YOR332W	RPS25B	P0C0T4	108 aa	Known RBP	5.04	□□□□□ -1.6
VMA4	YOR332W	SAG1	P20840	650 aa		5.04	□□□□□ -1.6
VMA4	YOR332W	SOF1	P33750	489 aa	Known RBP	5.04	□□□□□ -1.6
VMA4	YOR332W	YBL059W	P34224	193 aa		5.04	□□□□□ -1.6
VMA4	YOR332W	MIA40	P36046	403 aa		5.04	□□□□□ -1.6
VMA4	YOR332W	MRPL11	P36521	249 aa	Predicted RBP	5.04	□□□□□ -1.6
VMA4	YOR332W	YPS6	P40583	537 aa		5.04	□□□□□ -1.6
VMA4	YOR332W	TTI2	P47168	421 aa		5.04	□□□□□ -1.6
VMA4	YOR332W	YGR050C	P53231	118 aa		5.04	□□□□□ -1.6
VMA4	YOR332W	APS2	Q00381	147 aa		5.04	□□□□□ -1.6
VMA4	YOR332W	USV1	Q12132	391 aa		5.04	□□□□□ -1.6
VMA4	YOR332W	MPD1	Q12404	318 aa	Known RBP	5.04	□□□□□ -1.6
VMA4	YOR332W	YOR192C-C	Q3E736	78 aa		5.04	□□□□□ -1.6
VMA4	YOR332W	RPS25A	Q3E792	108 aa	Predicted RBP	5.04	□□□□□ -1.6
VMA4	YOR332W	YDL085C-A	Q3E7B7	68 aa	Known RBP	5.04	□□□□□ -1.6
VMA4	YOR332W	FMP49	A0A023PZB3	126 aa		5.03	□□□□□ -1.6
VMA4	YOR332W	YLR415C	O13578	112 aa		5.03	□□□□□ -1.6
VMA4	YOR332W	COX1	P00401	534 aa		5.03	□□□□□ -1.6
VMA4	YOR332W	POR1	P04840	283 aa	Known RBP	5.03	□□□□□ -1.6
VMA4	YOR332W	TRP4	P07285	380 aa	Predicted RBP	5.03	□□□□□ -1.6
VMA4	YOR332W	YHR214C-D	P0CX93	97 aa		5.03	□□□□□ -1.6
VMA4	YOR332W	URA5	P13298	226 aa	Known RBP	5.03	□□□□□ -1.6
VMA4	YOR332W	DEG1	P31115	442 aa	Known RBP	5.03	□□□□□ -1.6
VMA4	YOR332W	YMR262W	P38430	313 aa		5.03	□□□□□ -1.6
VMA4	YOR332W	LTP1	P40347	161 aa		5.03	□□□□□ -1.6
VMA4	YOR332W	REE1	P40893	198 aa		5.03	□□□□□ -1.6
VMA4	YOR332W	GPI2	P46961	280 aa		5.03	□□□□□ -1.6
VMA4	YOR332W	HIT1	P46973	164 aa		5.03	□□□□□ -1.6
VMA4	YOR332W	GEP7	P53171	287 aa		5.03	□□□□□ -1.6
VMA4	YOR332W	RCE1	Q03530	315 aa		5.03	□□□□□ -1.6
VMA4	YOR332W	COQ11	Q05892	277 aa		5.03	□□□□□ -1.6
VMA4	YOR332W	FAS1	P07149	2051 aa	Known RBP	5.02	□□□□□ -1.61
VMA4	YOR332W	RPS22A	P0C0W1	130 aa	Known RBP	5.02	□□□□□ -1.61
VMA4	YOR332W	RPS16A	P0CX51	143 aa	Known RBP	5.02	□□□□□ -1.61
VMA4	YOR332W	RPS16B	P0CX52	143 aa	Known RBP	5.02	□□□□□ -1.61
VMA4	YOR332W	ATG15	P25641	520 aa		5.02	□□□□□ -1.61
VMA4	YOR332W	QDR3	P38227	689 aa		5.02	□□□□□ -1.61
VMA4	YOR332W	NTC20	P38302	140 aa	Predicted RBP	5.02	□□□□□ -1.61
VMA4	YOR332W	YHR210C	P38893	341 aa		5.02	□□□□□ -1.61
VMA4	YOR332W	YER079W	P40052	210 aa	Known RBP	5.02	□□□□□ -1.61
VMA4	YOR332W	YIL169C	P40442	995 aa		5.02	□□□□□ -1.61
VMA4	YOR332W	CRH1	P53301	507 aa		5.02	□□□□□ -1.61
VMA4	YOR332W	DAD3	P69850	94 aa		5.02	□□□□□ -1.61
VMA4	YOR332W	STD1	Q02794	444 aa		5.02	□□□□□ -1.61
VMA4	YOR332W	ATG21	Q02887	496 aa		5.02	□□□□□ -1.61
VMA4	YOR332W	CGI121	Q03705	181 aa	Known RBP	5.02	□□□□□ -1.61
VMA4	YOR332W	DPB4	Q04603	196 aa	Known RBP	5.02	□□□□□ -1.61
VMA4	YOR332W	YMR254C	Q04838	102 aa		5.02	□□□□□ -1.61
VMA4	YOR332W	FRQ1	Q06389	190 aa		5.02	□□□□□ -1.61
VMA4	YOR332W	PAA1	Q12447	191 aa	Known RBP	5.02	□□□□□ -1.61
VMA4	YOR332W	BOL1	Q3E793	110 aa		5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 167.9 ms