RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeastyeast

Gene CAF20, Length 486 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF20YOR276W YMR099CQ03161 297 aaKnown RBP2.36□□□□□ -2.03
CAF20YOR276W HPT1Q04178 221 aaKnown RBP2.36□□□□□ -2.03
CAF20YOR276W YOR342CQ12182 319 aa2.36□□□□□ -2.03
CAF20YOR276W ODC2Q99297 307 aa2.36□□□□□ -2.03
CAF20YOR276W CMD1P06787 147 aaKnown RBP2.35□□□□□ -2.03
CAF20YOR276W RPS28BP0C0X0 67 aaKnown RBP2.35□□□□□ -2.03
CAF20YOR276W SCL1P21243 252 aaKnown RBP2.35□□□□□ -2.03
CAF20YOR276W TVP38P36164 337 aa2.35□□□□□ -2.03
CAF20YOR276W FIG1P38224 298 aa2.35□□□□□ -2.03
CAF20YOR276W PHO88P38264 188 aaPredicted RBP2.35□□□□□ -2.03
CAF20YOR276W YER134CP40081 178 aa2.35□□□□□ -2.03
CAF20YOR276W TIR3P40552 269 aa2.35□□□□□ -2.03
CAF20YOR276W TMA22P47089 198 aaPredicted RBP2.35□□□□□ -2.03
CAF20YOR276W BOL2P53082 120 aa2.35□□□□□ -2.03
CAF20YOR276W NUP49Q02199 472 aa2.35□□□□□ -2.03
CAF20YOR276W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
CAF20YOR276W RPS28AQ3E7X9 67 aaPredicted RBP2.35□□□□□ -2.03
CAF20YOR276W YAR023CD6VPM8 179 aa2.34□□□□□ -2.03
CAF20YOR276W POR1P04840 283 aaKnown RBP2.34□□□□□ -2.03
CAF20YOR276W KDX1P36005 433 aa2.34□□□□□ -2.03
CAF20YOR276W VTC1P40046 129 aaRIP-Chip data2.34□□□□□ -2.03not detected
CAF20YOR276W YFL019CP43576 117 aa2.34□□□□□ -2.03
CAF20YOR276W SOL1P50278 321 aa2.34□□□□□ -2.03
CAF20YOR276W HSK3P69852 69 aa2.34□□□□□ -2.03
CAF20YOR276W DYN3Q04949 312 aa2.34□□□□□ -2.03
CAF20YOR276W FSF1Q12029 327 aaKnown RBP2.34□□□□□ -2.03
CAF20YOR276W PDR18P53756 1333 aa2.34□□□□□ -2.04
CAF20YOR276W RAS2P01120 322 aaKnown RBP2.33□□□□□ -2.04
CAF20YOR276W DER1P38307 211 aa2.33□□□□□ -2.04
CAF20YOR276W NSG1P38837 291 aa2.33□□□□□ -2.04
CAF20YOR276W MTW1P39731 289 aa2.33□□□□□ -2.04
CAF20YOR276W RFC2P40348 353 aa2.33□□□□□ -2.04
CAF20YOR276W MPC3P53311 146 aa2.33□□□□□ -2.04
CAF20YOR276W RGM1Q00453 211 aa2.33□□□□□ -2.04
CAF20YOR276W PLP1Q04004 230 aa2.33□□□□□ -2.04
CAF20YOR276W NAT3Q06504 195 aa2.33□□□□□ -2.04
CAF20YOR276W YLR053CQ12026 108 aa2.33□□□□□ -2.04
CAF20YOR276W DGK1Q12382 290 aa2.33□□□□□ -2.04
CAF20YOR276W RDI1Q12434 202 aa2.33□□□□□ -2.04
CAF20YOR276W EDC3P39998 551 aaKnown RBP2.32□□□□□ -2.04
CAF20YOR276W YNL217WP40152 326 aa2.32□□□□□ -2.04
CAF20YOR276W DAN1P47178 298 aa2.32□□□□□ -2.04
CAF20YOR276W SBH2P52871 88 aa2.32□□□□□ -2.04
CAF20YOR276W CYT2Q00873 224 aa2.32□□□□□ -2.04
CAF20YOR276W PET20Q99373 253 aa2.32□□□□□ -2.04
CAF20YOR276W NSP1P14907 823 aaKnown RBP2.31□□□□□ -2.04
CAF20YOR276W YCR023CP25351 611 aa2.31□□□□□ -2.04
CAF20YOR276W YHR022CP38763 256 aa2.31□□□□□ -2.04
CAF20YOR276W TVP23P38962 199 aa2.31□□□□□ -2.04
CAF20YOR276W AGE2P40529 298 aa2.31□□□□□ -2.04
CAF20YOR276W ERJ5P43613 295 aaPredicted RBP2.31□□□□□ -2.04
CAF20YOR276W ERG25P53045 309 aa2.31□□□□□ -2.04
CAF20YOR276W DAD3P69850 94 aa2.31□□□□□ -2.04
CAF20YOR276W MAK3Q03503 176 aa2.31□□□□□ -2.04
CAF20YOR276W CGI121Q03705 181 aaKnown RBP2.31□□□□□ -2.04
CAF20YOR276W SPO13P23624 291 aa2.3□□□□□ -2.04
CAF20YOR276W CSH1P38287 376 aa2.3□□□□□ -2.04
CAF20YOR276W VPS71Q03433 280 aa2.3□□□□□ -2.04
CAF20YOR276W NSL1Q12143 216 aa2.3□□□□□ -2.04
CAF20YOR276W YLR412C-AQ3E742 68 aa2.3□□□□□ -2.04
CAF20YOR276W FZF1P32805 299 aa2.29□□□□□ -2.04
CAF20YOR276W SLM6P38343 150 aa2.29□□□□□ -2.04
CAF20YOR276W TMA20P89886 181 aaPredicted RBP2.29□□□□□ -2.04
CAF20YOR276W DIG2Q03373 323 aaKnown RBP2.29□□□□□ -2.04
CAF20YOR276W YMR295CQ03559 197 aa2.29□□□□□ -2.04
CAF20YOR276W YPR127WQ06494 345 aa2.29□□□□□ -2.04
CAF20YOR276W FYV12Q08559 129 aa2.29□□□□□ -2.04
CAF20YOR276W ATG40Q99325 256 aa2.29□□□□□ -2.04
CAF20YOR276W YLR236CA0A023PZG4 107 aa2.28□□□□□ -2.04
CAF20YOR276W DDI2P0CH63 225 aa2.28□□□□□ -2.04
CAF20YOR276W DDI3P0CH64 225 aa2.28□□□□□ -2.04
CAF20YOR276W TIR1P10863 254 aa2.28□□□□□ -2.04
CAF20YOR276W CPR5P35176 225 aa2.28□□□□□ -2.04
CAF20YOR276W SHE2P36068 246 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
CAF20YOR276W TTI2P47168 421 aa2.28□□□□□ -2.04
CAF20YOR276W SBH1P52870 82 aa2.28□□□□□ -2.04
CAF20YOR276W MPA43P53583 542 aaPredicted RBP2.28□□□□□ -2.04
CAF20YOR276W DAS2Q12084 232 aa2.28□□□□□ -2.04
CAF20YOR276W YDL180WQ12301 547 aa2.28□□□□□ -2.04
CAF20YOR276W MET5P47169 1442 aa2.27□□□□□ -2.05
CAF20YOR276W SVP26P38869 228 aa2.27□□□□□ -2.05
CAF20YOR276W GAA1P39012 614 aa2.27□□□□□ -2.05
CAF20YOR276W CUP9P41817 306 aa2.27□□□□□ -2.05
CAF20YOR276W THI74Q04083 370 aa2.27□□□□□ -2.05
CAF20YOR276W YPR202WQ08993 238 aa2.27□□□□□ -2.05
CAF20YOR276W YHR086W-AQ3E746 53 aa2.27□□□□□ -2.05
CAF20YOR276W BUB2P26448 306 aaPredicted RBP2.26□□□□□ -2.05
CAF20YOR276W PAM17P36147 197 aa2.26□□□□□ -2.05
CAF20YOR276W YBR209WP38311 105 aa2.26□□□□□ -2.05
CAF20YOR276W YFR054CP43622 192 aa2.26□□□□□ -2.05
CAF20YOR276W YGL101WP53144 215 aa2.26□□□□□ -2.05
CAF20YOR276W YDR476CQ03362 224 aa2.26□□□□□ -2.05
CAF20YOR276W SHH3Q04487 196 aa2.26□□□□□ -2.05
CAF20YOR276W YMR253CQ04835 414 aa2.26□□□□□ -2.05
CAF20YOR276W IRC23Q08416 157 aa2.26□□□□□ -2.05
CAF20YOR276W YLR422WQ06409 1932 aa2.25□□□□□ -2.05
CAF20YOR276W SPC25P40014 221 aa2.25□□□□□ -2.05
CAF20YOR276W GAL83Q04739 417 aa2.25□□□□□ -2.05
CAF20YOR276W SML1Q04964 104 aa2.25□□□□□ -2.05
CAF20YOR276W UBI4P0CG63 381 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms