RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A SPG4Q04438 115 aa2.35□□□□□ -2.03
YSF3YNL138W-A PRM4Q12498 284 aa2.35□□□□□ -2.03
YSF3YNL138W-A YMR105W-AQ8TGS8 64 aa2.35□□□□□ -2.03
YSF3YNL138W-A SIR2P06700 562 aa2.34□□□□□ -2.03
YSF3YNL138W-A ARG80P07249 177 aa2.34□□□□□ -2.03
YSF3YNL138W-A STE18P18852 110 aa2.34□□□□□ -2.03
YSF3YNL138W-A ATP7P30902 174 aa2.34□□□□□ -2.03
YSF3YNL138W-A TIM12P32830 109 aa2.34□□□□□ -2.03
YSF3YNL138W-A SDH4P37298 181 aa2.34□□□□□ -2.03
YSF3YNL138W-A YBR063CP38083 404 aa2.34□□□□□ -2.03
YSF3YNL138W-A TAD2P47058 250 aa2.34□□□□□ -2.03
YSF3YNL138W-A CAX4P53223 239 aa2.34□□□□□ -2.03
YSF3YNL138W-A GIM5Q04493 163 aa2.34□□□□□ -2.03
YSF3YNL138W-A MSH5Q12175 901 aa2.34□□□□□ -2.03
YSF3YNL138W-A JLP1Q12358 412 aa2.34□□□□□ -2.03
YSF3YNL138W-A YKL018C-AQ3E7A7 99 aa2.34□□□□□ -2.03
YSF3YNL138W-A CUP2P15315 225 aa2.33□□□□□ -2.04
YSF3YNL138W-A TOM40P23644 387 aaKnown RBP2.33□□□□□ -2.04
YSF3YNL138W-A RNA15P25299 296 aaPredicted RBP2.33□□□□□ -2.04
YSF3YNL138W-A LHP1P33399 275 aaKnown RBP2.33□□□□□ -2.04
YSF3YNL138W-A PTC1P35182 281 aa2.33□□□□□ -2.04
YSF3YNL138W-A MCH2P36032 473 aa2.33□□□□□ -2.04
YSF3YNL138W-A BIG1P38813 335 aa2.33□□□□□ -2.04
YSF3YNL138W-A SOP4P39543 234 aaPredicted RBP2.33□□□□□ -2.04
YSF3YNL138W-A COX15P40086 486 aa2.33□□□□□ -2.04
YSF3YNL138W-A YGL118CP53132 145 aa2.33□□□□□ -2.04
YSF3YNL138W-A SYF2P53277 215 aaPredicted RBP2.33□□□□□ -2.04
YSF3YNL138W-A YNR066CP53752 436 aa2.33□□□□□ -2.04
YSF3YNL138W-A YDC1Q02896 317 aa2.33□□□□□ -2.04
YSF3YNL138W-A YOL131WQ08270 108 aa2.33□□□□□ -2.04
YSF3YNL138W-A HRT1Q08273 121 aa2.33□□□□□ -2.04
YSF3YNL138W-A THP2O13539 261 aaKnown RBP2.32□□□□□ -2.04
YSF3YNL138W-A SGA1P08019 549 aa2.32□□□□□ -2.04
YSF3YNL138W-A YBR121C-AP0C5L4 52 aa2.32□□□□□ -2.04
YSF3YNL138W-A DSF1P0CX08 502 aa2.32□□□□□ -2.04
YSF3YNL138W-A YNR073CP0CX09 502 aa2.32□□□□□ -2.04
YSF3YNL138W-A MATALPHA1P0CY06 175 aa2.32□□□□□ -2.04
YSF3YNL138W-A HMLALPHA1P0CY07 175 aa2.32□□□□□ -2.04
YSF3YNL138W-A IFM1P25038 676 aa2.32□□□□□ -2.04
YSF3YNL138W-A VPH2P32341 215 aa2.32□□□□□ -2.04
YSF3YNL138W-A YBR096WP38256 230 aa2.32□□□□□ -2.04
YSF3YNL138W-A PRS2P38620 318 aaKnown RBP2.32□□□□□ -2.04
YSF3YNL138W-A NOP19P53317 196 aaPredicted RBP2.32□□□□□ -2.04
YSF3YNL138W-A ATG17Q06410 417 aa2.32□□□□□ -2.04
YSF3YNL138W-A PEX3P28795 441 aa2.31□□□□□ -2.04
YSF3YNL138W-A SPT4P32914 102 aaPredicted RBP2.31□□□□□ -2.04
YSF3YNL138W-A YPC1P38298 316 aa2.31□□□□□ -2.04
YSF3YNL138W-A SEC72P39742 193 aaKnown RBP2.31□□□□□ -2.04
YSF3YNL138W-A RMD6P39975 231 aa2.31□□□□□ -2.04
YSF3YNL138W-A CCC1P47818 322 aa2.31□□□□□ -2.04
YSF3YNL138W-A YNR062CP53748 327 aa2.31□□□□□ -2.04
YSF3YNL138W-A TRM10Q12400 293 aa2.31□□□□□ -2.04
YSF3YNL138W-A COX5BP00425 151 aa2.3□□□□□ -2.04
YSF3YNL138W-A JEN1P36035 616 aa2.3□□□□□ -2.04
YSF3YNL138W-A RIB1P38066 345 aa2.3□□□□□ -2.04
YSF3YNL138W-A NRG2P38082 220 aa2.3□□□□□ -2.04
YSF3YNL138W-A GON7P46984 123 aa2.3□□□□□ -2.04
YSF3YNL138W-A PIR5P46999 287 aa2.3□□□□□ -2.04
YSF3YNL138W-A RMR1P53060 241 aa2.3□□□□□ -2.04
YSF3YNL138W-A DIA1P54005 336 aa2.3□□□□□ -2.04
YSF3YNL138W-A VBA1Q04301 562 aa2.3□□□□□ -2.04
YSF3YNL138W-A ARR2Q06597 130 aa2.3□□□□□ -2.04
YSF3YNL138W-A CTR3Q06686 241 aa2.3□□□□□ -2.04
YSF3YNL138W-A YOR292CQ08743 309 aa2.3□□□□□ -2.04
YSF3YNL138W-A YLR053CQ12026 108 aa2.3□□□□□ -2.04
YSF3YNL138W-A VIK1Q12045 647 aa2.3□□□□□ -2.04
YSF3YNL138W-A FCY1Q12178 158 aa2.3□□□□□ -2.04
YSF3YNL138W-A SME1Q12330 94 aaPredicted RBP2.3□□□□□ -2.04
YSF3YNL138W-A YJL197C-AP0C5P0 93 aa2.29□□□□□ -2.04
YSF3YNL138W-A YMR31P19955 123 aa2.29□□□□□ -2.04
YSF3YNL138W-A RPS1BP23248 255 aaKnown RBP2.29□□□□□ -2.04
YSF3YNL138W-A TCA17P32613 152 aa2.29□□□□□ -2.04
YSF3YNL138W-A UTR5P32630 166 aa2.29□□□□□ -2.04
YSF3YNL138W-A MRPL6P32904 214 aa2.29□□□□□ -2.04
YSF3YNL138W-A SRL3P36167 246 aa2.29□□□□□ -2.04
YSF3YNL138W-A TRM5P38793 499 aa2.29□□□□□ -2.04
YSF3YNL138W-A ASP1P38986 381 aaPredicted RBP2.29□□□□□ -2.04
YSF3YNL138W-A TMA22P47089 198 aaPredicted RBP2.29□□□□□ -2.04
YSF3YNL138W-A VPS55P47111 140 aa2.29□□□□□ -2.04
YSF3YNL138W-A MIC26P50087 233 aa2.29□□□□□ -2.04
YSF3YNL138W-A SSU72P53538 206 aaPredicted RBP2.29□□□□□ -2.04
YSF3YNL138W-A RCF2P53721 224 aa2.29□□□□□ -2.04
YSF3YNL138W-A OST6Q03723 332 aa2.29□□□□□ -2.04
YSF3YNL138W-A RRP17Q04031 235 aaPredicted RBP2.29□□□□□ -2.04
YSF3YNL138W-A DPP1Q05521 289 aa2.29□□□□□ -2.04
YSF3YNL138W-A HOR7Q05827 59 aa2.29□□□□□ -2.04
YSF3YNL138W-A SFH1Q06168 426 aa2.29□□□□□ -2.04
YSF3YNL138W-A PEX30Q06169 523 aa2.29□□□□□ -2.04
YSF3YNL138W-A YPR127WQ06494 345 aa2.29□□□□□ -2.04
YSF3YNL138W-A SNF6P18888 332 aa2.28□□□□□ -2.04
YSF3YNL138W-A FZO1P38297 855 aa2.28□□□□□ -2.04
YSF3YNL138W-A RTC3P38804 111 aaPredicted RBP2.28□□□□□ -2.04
YSF3YNL138W-A IKI1P38874 309 aa2.28□□□□□ -2.04
YSF3YNL138W-A ERG28P40030 148 aa2.28□□□□□ -2.04
YSF3YNL138W-A YJR012CP47087 207 aa2.28□□□□□ -2.04
YSF3YNL138W-A SOL1P50278 321 aa2.28□□□□□ -2.04
YSF3YNL138W-A YGL235WP53071 178 aa2.28□□□□□ -2.04
YSF3YNL138W-A CTF19Q02732 369 aa2.28□□□□□ -2.04
YSF3YNL138W-A PEX12Q04370 399 aa2.28□□□□□ -2.04
YSF3YNL138W-A ARC18Q05933 178 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms