RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C CAF40P53829 373 aa3.59□□□□□ -1.83
CCS1YMR038C CTF19Q02732 369 aa3.59□□□□□ -1.83
CCS1YMR038C GRH1Q04410 372 aaKnown RBP3.59□□□□□ -1.83
CCS1YMR038C NOC4Q06512 552 aaPredicted RBP3.59□□□□□ -1.83
CCS1YMR038C YOL029CQ08187 201 aa3.59□□□□□ -1.83
CCS1YMR038C RPS18AP0CX55 146 aaKnown RBP3.58□□□□□ -1.84
CCS1YMR038C RPS18BP0CX56 146 aaPredicted RBP3.58□□□□□ -1.84
CCS1YMR038C ARO7P32178 256 aa3.58□□□□□ -1.84
CCS1YMR038C AUA1P32450 94 aa3.58□□□□□ -1.84
CCS1YMR038C YPI1P43587 155 aa3.58□□□□□ -1.84
CCS1YMR038C YJL118WP47022 219 aa3.58□□□□□ -1.84
CCS1YMR038C RPL9BP51401 191 aaKnown RBP3.58□□□□□ -1.84
CCS1YMR038C RBD2Q12270 262 aa3.58□□□□□ -1.84
CCS1YMR038C MED11Q99278 115 aa3.58□□□□□ -1.84
CCS1YMR038C ODC2Q99297 307 aa3.58□□□□□ -1.84
CCS1YMR038C STF2P16965 84 aa3.57□□□□□ -1.84
CCS1YMR038C RFA3P26755 122 aaKnown RBP3.57□□□□□ -1.84
CCS1YMR038C ECM25P32525 599 aa3.57□□□□□ -1.84
CCS1YMR038C RPB7P34087 171 aa3.57□□□□□ -1.84
CCS1YMR038C SHE2P36068 246 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
CCS1YMR038C YKR045CP36138 183 aa3.57□□□□□ -1.84
CCS1YMR038C SAS2P40963 338 aa3.57□□□□□ -1.84
CCS1YMR038C MSS2P40990 351 aa3.57□□□□□ -1.84
CCS1YMR038C ECM27P47144 725 aa3.57□□□□□ -1.84
CCS1YMR038C NDE2Q07500 545 aa3.57□□□□□ -1.84
CCS1YMR038C YPD1Q07688 167 aa3.57□□□□□ -1.84
CCS1YMR038C HIS3P06633 220 aa3.56□□□□□ -1.84
CCS1YMR038C UTP30P36144 274 aaKnown RBP3.56□□□□□ -1.84
CCS1YMR038C MIX23P38162 196 aa3.56□□□□□ -1.84
CCS1YMR038C YBR137WP38276 179 aa3.56□□□□□ -1.84
CCS1YMR038C YHK8P38776 514 aa3.56□□□□□ -1.84
CCS1YMR038C MRPL49P40858 161 aaPredicted RBP3.56□□□□□ -1.84
CCS1YMR038C YAE1P47118 141 aaPredicted RBP3.56□□□□□ -1.84
CCS1YMR038C ILM1P47155 203 aa3.56□□□□□ -1.84
CCS1YMR038C SOL1P50278 321 aa3.56□□□□□ -1.84
CCS1YMR038C TOS8P53147 276 aa3.56□□□□□ -1.84
CCS1YMR038C SLX9P53251 210 aaPredicted RBP3.56□□□□□ -1.84
CCS1YMR038C YMR181CQ03231 154 aa3.56□□□□□ -1.84
CCS1YMR038C TSA2Q04120 196 aa3.56□□□□□ -1.84
CCS1YMR038C HNT1Q04344 158 aaKnown RBP3.56□□□□□ -1.84
CCS1YMR038C LPP1Q04396 274 aa3.56□□□□□ -1.84
CCS1YMR038C YPL199CQ08954 240 aa3.56□□□□□ -1.84
CCS1YMR038C LSB5P25369 354 aa3.55□□□□□ -1.84
CCS1YMR038C IKI1P38874 309 aa3.55□□□□□ -1.84
CCS1YMR038C MST28P39552 234 aa3.55□□□□□ -1.84
CCS1YMR038C PCL7P40186 285 aa3.55□□□□□ -1.84
CCS1YMR038C YJL218WP40892 196 aaKnown RBP3.55□□□□□ -1.84
CCS1YMR038C OTU1P43558 301 aa3.55□□□□□ -1.84
CCS1YMR038C YGR042WP53227 271 aa3.55□□□□□ -1.84
CCS1YMR038C VHT1P53241 593 aa3.55□□□□□ -1.84
CCS1YMR038C CRH1P53301 507 aa3.55□□□□□ -1.84
CCS1YMR038C YIF1P53845 314 aaKnown RBP3.55□□□□□ -1.84
CCS1YMR038C YHP1Q04116 353 aa3.55□□□□□ -1.84
CCS1YMR038C ERV2Q12284 196 aa3.55□□□□□ -1.84
CCS1YMR038C DGK1Q12382 290 aa3.55□□□□□ -1.84
CCS1YMR038C QCR7P00128 127 aa3.54□□□□□ -1.84
CCS1YMR038C URA6P15700 204 aa3.54□□□□□ -1.84
CCS1YMR038C FUS3P16892 353 aaKnown RBP3.54□□□□□ -1.84
CCS1YMR038C TIP1P27654 210 aaPredicted RBP3.54□□□□□ -1.84
CCS1YMR038C ERV1P27882 189 aa3.54□□□□□ -1.84
CCS1YMR038C SPS18P32572 300 aa3.54□□□□□ -1.84
CCS1YMR038C UTR5P32630 166 aa3.54□□□□□ -1.84
CCS1YMR038C ECM33P38248 429 aaKnown RBP3.54□□□□□ -1.84
CCS1YMR038C SYS1P41544 203 aa3.54□□□□□ -1.84
CCS1YMR038C YJR011CP47086 261 aaPredicted RBP3.54□□□□□ -1.84
CCS1YMR038C DIE2P50076 525 aa3.54□□□□□ -1.84
CCS1YMR038C PBP4Q07362 185 aaKnown RBP3.54□□□□□ -1.84
CCS1YMR038C IRC23Q08416 157 aa3.54□□□□□ -1.84
CCS1YMR038C YOR292CQ08743 309 aa3.54□□□□□ -1.84
CCS1YMR038C ATG41Q12048 136 aa3.54□□□□□ -1.84
CCS1YMR038C RPL9AP05738 191 aaKnown RBP3.53□□□□□ -1.84
CCS1YMR038C SEN2P16658 377 aa3.53□□□□□ -1.84
CCS1YMR038C IFM1P25038 676 aa3.53□□□□□ -1.84
CCS1YMR038C ROX3P25046 220 aa3.53□□□□□ -1.84
CCS1YMR038C CPR4P25334 318 aa3.53□□□□□ -1.84
CCS1YMR038C YPS1P32329 569 aa3.53□□□□□ -1.84
CCS1YMR038C YUH1P35127 236 aa3.53□□□□□ -1.84
CCS1YMR038C MRPL38P35996 138 aaPredicted RBP3.53□□□□□ -1.84
CCS1YMR038C SMB1P40018 196 aaKnown RBP3.53□□□□□ -1.84
CCS1YMR038C RTT105P40063 208 aa3.53□□□□□ -1.84
CCS1YMR038C COX15P40086 486 aa3.53□□□□□ -1.84
CCS1YMR038C PDS1P40316 373 aaPredicted RBP3.53□□□□□ -1.84
CCS1YMR038C ALG9P53868 555 aaKnown RBP3.53□□□□□ -1.84
CCS1YMR038C YDR286CQ05530 114 aa3.53□□□□□ -1.84
CCS1YMR038C GPN3Q06543 272 aa3.53□□□□□ -1.84
CCS1YMR038C MRPL35Q06678 367 aa3.53□□□□□ -1.84
CCS1YMR038C YLR365WQ7LIF2 110 aa3.53□□□□□ -1.84
CCS1YMR038C HTB1P02293 131 aaKnown RBP3.52□□□□□ -1.85
CCS1YMR038C RPL24BP24000 155 aaKnown RBP3.52□□□□□ -1.85
CCS1YMR038C RNP1P32385 249 aa3.52□□□□□ -1.85
CCS1YMR038C HYM1P32464 399 aa3.52□□□□□ -1.85
CCS1YMR038C FCY21P40039 528 aa3.52□□□□□ -1.85
CCS1YMR038C PRM5P40476 318 aa3.52□□□□□ -1.85
CCS1YMR038C YFL067WP43537 175 aa3.52□□□□□ -1.85
CCS1YMR038C HAM1P47119 197 aaKnown RBP3.52□□□□□ -1.85
CCS1YMR038C GRX3Q03835 250 aa3.52□□□□□ -1.85
CCS1YMR038C CAB5Q03941 241 aa3.52□□□□□ -1.85
CCS1YMR038C PBA1Q05778 276 aa3.52□□□□□ -1.85
CCS1YMR038C YFH1Q07540 174 aa3.52□□□□□ -1.85
CCS1YMR038C TIM18Q08749 192 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms