RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	HTB1	P02293	131 aa	Known RBP	12.55	□□□□□ -0.4
CCC1	YLR220W	TOM40	P23644	387 aa	Known RBP	12.55	□□□□□ -0.4
CCC1	YLR220W	ASP1	P38986	381 aa	Predicted RBP	12.55	□□□□□ -0.4
CCC1	YLR220W	DFG10	P40526	253 aa		12.55	□□□□□ -0.4
CCC1	YLR220W	YGL117W	P53133	265 aa		12.55	□□□□□ -0.4
CCC1	YLR220W	JAC1	P53193	184 aa		12.54	□□□□□ -0.4
CCC1	YLR220W	HCH1	P53834	153 aa		12.54	□□□□□ -0.4
CCC1	YLR220W	BER1	Q06688	274 aa	Known RBP	12.54	□□□□□ -0.4
CCC1	YLR220W	YHR213W-A	Q8TGT4	77 aa		12.54	□□□□□ -0.4
CCC1	YLR220W	RPD3	P32561	433 aa		12.53	□□□□□ -0.4
CCC1	YLR220W	GCV3	P39726	170 aa	Predicted RBP	12.53	□□□□□ -0.4
CCC1	YLR220W	YEA4	P40004	342 aa		12.53	□□□□□ -0.4
CCC1	YLR220W	YJL213W	P40896	331 aa		12.53	□□□□□ -0.4
CCC1	YLR220W	JID1	Q12350	301 aa		12.53	□□□□□ -0.4
CCC1	YLR220W	RAD23	P32628	398 aa	Known RBP	12.52	□□□□□ -0.41
CCC1	YLR220W	SSU72	P53538	206 aa	Predicted RBP	12.52	□□□□□ -0.41
CCC1	YLR220W	PDR17	P53844	350 aa		12.52	□□□□□ -0.41
CCC1	YLR220W	COA4	Q05809	96 aa		12.52	□□□□□ -0.41
CCC1	YLR220W	MCH1	Q07376	486 aa		12.52	□□□□□ -0.41
CCC1	YLR220W	SRL1	Q08673	210 aa		12.52	□□□□□ -0.41
CCC1	YLR220W	YBR298C-A	Q8TGK4	73 aa		12.52	□□□□□ -0.41
CCC1	YLR220W	TRP4	P07285	380 aa	Predicted RBP	12.51	□□□□□ -0.41
CCC1	YLR220W	URA5	P13298	226 aa	Known RBP	12.51	□□□□□ -0.41
CCC1	YLR220W	YBR184W	P38299	523 aa		12.51	□□□□□ -0.41
CCC1	YLR220W	YJL163C	P46996	555 aa		12.51	□□□□□ -0.41
CCC1	YLR220W	SRB7	P47822	140 aa		12.51	□□□□□ -0.41
CCC1	YLR220W	YDR157W	A0A023PZE8	133 aa		12.5	□□□□□ -0.41
CCC1	YLR220W	YCR025C	P25352	136 aa		12.5	□□□□□ -0.41
CCC1	YLR220W	RTC3	P38804	111 aa	Predicted RBP	12.5	□□□□□ -0.41
CCC1	YLR220W	COX15	P40086	486 aa		12.5	□□□□□ -0.41
CCC1	YLR220W	DCS1	Q06151	350 aa		12.5	□□□□□ -0.41
CCC1	YLR220W	SIP1	P32578	815 aa		12.48	□□□□□ -0.41
CCC1	YLR220W	SNX4	P47057	423 aa		12.48	□□□□□ -0.41
CCC1	YLR220W	BUL1	P48524	976 aa		12.48	□□□□□ -0.41
CCC1	YLR220W	DYN2	Q02647	92 aa		12.48	□□□□□ -0.41
CCC1	YLR220W	RAD28	Q12021	506 aa		12.48	□□□□□ -0.41
CCC1	YLR220W	FCF2	Q12035	217 aa	Predicted RBP	12.48	□□□□□ -0.41
CCC1	YLR220W	RKI1	Q12189	258 aa		12.48	□□□□□ -0.41
CCC1	YLR220W	PRR2	Q12310	699 aa		12.48	□□□□□ -0.41
CCC1	YLR220W	UTP20	P35194	2493 aa	Known RBP	12.48	□□□□□ -0.41
CCC1	YLR220W	NSA2	P40078	261 aa	Known RBP	12.47	□□□□□ -0.41
CCC1	YLR220W	LST8	P41318	303 aa		12.47	□□□□□ -0.41
CCC1	YLR220W	ERG25	P53045	309 aa		12.47	□□□□□ -0.41
CCC1	YLR220W	FRQ1	Q06389	190 aa		12.47	□□□□□ -0.41
CCC1	YLR220W	AGC1	Q12482	902 aa		12.47	□□□□□ -0.41
CCC1	YLR220W	SOD1	P00445	154 aa	Known RBP	12.46	□□□□□ -0.41
CCC1	YLR220W	UBI4	P0CG63	381 aa	Known RBP	12.46	□□□□□ -0.41
CCC1	YLR220W	FEN2	P25621	512 aa	Known RBP	12.45	□□□□□ -0.42
CCC1	YLR220W	DAL3	P32459	195 aa		12.45	□□□□□ -0.42
CCC1	YLR220W	WWM1	P43582	211 aa	Known RBP	12.45	□□□□□ -0.42
CCC1	YLR220W	FMP16	Q12497	93 aa		12.45	□□□□□ -0.42
CCC1	YLR220W	FCY2	P17064	533 aa		12.44	□□□□□ -0.42
CCC1	YLR220W	UPS2	P35200	230 aa		12.44	□□□□□ -0.42
CCC1	YLR220W	WSS1	P38838	269 aa		12.44	□□□□□ -0.42
CCC1	YLR220W	GPP2	P40106	250 aa	Known RBP	12.44	□□□□□ -0.42
CCC1	YLR220W	HXT14	P42833	540 aa		12.44	□□□□□ -0.42
CCC1	YLR220W	ORM1	P53224	222 aa		12.44	□□□□□ -0.42
CCC1	YLR220W	USV1	Q12132	391 aa		12.44	□□□□□ -0.42
CCC1	YLR220W	MOT3	P54785	490 aa	Known RBP	12.43	□□□□□ -0.42
CCC1	YLR220W	YLR179C	Q06252	201 aa	Known RBP	12.43	□□□□□ -0.42
CCC1	YLR220W	POC4	Q12245	148 aa	Predicted RBP	12.43	□□□□□ -0.42
CCC1	YLR220W	ILV5	P06168	395 aa	Known RBP	12.42	□□□□□ -0.42
CCC1	YLR220W	MRS3	P10566	314 aa		12.42	□□□□□ -0.42
CCC1	YLR220W	INO2	P26798	304 aa		12.42	□□□□□ -0.42
CCC1	YLR220W	FPR2	P32472	135 aa		12.42	□□□□□ -0.42
CCC1	YLR220W	YGR269W	P40326	108 aa		12.42	□□□□□ -0.42
CCC1	YLR220W	DUG3	P53871	357 aa		12.42	□□□□□ -0.42
CCC1	YLR220W	PRS4	P38063	326 aa	Predicted RBP	12.41	□□□□□ -0.42
CCC1	YLR220W	YPT31	P38555	223 aa	Known RBP	12.41	□□□□□ -0.42
CCC1	YLR220W	TIF11	P38912	153 aa	Known RBP	12.41	□□□□□ -0.42
CCC1	YLR220W	NDE2	Q07500	545 aa		12.41	□□□□□ -0.42
CCC1	YLR220W	YBR085C-A	O43137	85 aa		12.4	□□□□□ -0.42
CCC1	YLR220W	RPS25B	P0C0T4	108 aa	Known RBP	12.4	□□□□□ -0.42
CCC1	YLR220W	YNR066C	P53752	436 aa		12.4	□□□□□ -0.42
CCC1	YLR220W	YML122C	Q03207	126 aa		12.4	□□□□□ -0.42
CCC1	YLR220W	MRPS17	Q03246	237 aa	Predicted RBP	12.4	□□□□□ -0.42
CCC1	YLR220W	SPG4	Q04438	115 aa		12.4	□□□□□ -0.42
CCC1	YLR220W	TDA6	Q06466	467 aa		12.4	□□□□□ -0.42
CCC1	YLR220W	MSA1	Q08471	629 aa		12.4	□□□□□ -0.42
CCC1	YLR220W	RPS25A	Q3E792	108 aa	Predicted RBP	12.4	□□□□□ -0.42
CCC1	YLR220W	VMA7	P39111	118 aa		12.39	□□□□□ -0.43
CCC1	YLR220W	PHO23	P50947	330 aa		12.39	□□□□□ -0.43
CCC1	YLR220W	UBC12	P52491	188 aa		12.39	□□□□□ -0.43
CCC1	YLR220W	QDR3	P38227	689 aa		12.38	□□□□□ -0.43
CCC1	YLR220W	PEX7	P39108	375 aa		12.38	□□□□□ -0.43
CCC1	YLR220W	YDL242W	Q07746	117 aa		12.38	□□□□□ -0.43
CCC1	YLR220W	YCR041W	P37265	110 aa		12.37	□□□□□ -0.43
CCC1	YLR220W	YCL001W-A	P87012	153 aa		12.37	□□□□□ -0.43
CCC1	YLR220W	SYG1	P40528	902 aa		12.36	□□□□□ -0.43
CCC1	YLR220W	EMC5	P40540	141 aa		12.36	□□□□□ -0.43
CCC1	YLR220W	TAX4	P47030	604 aa		12.36	□□□□□ -0.43
CCC1	YLR220W	PBP4	Q07362	185 aa	Known RBP	12.36	□□□□□ -0.43
CCC1	YLR220W	RPP1A	P05318	106 aa	Predicted RBP	12.35	□□□□□ -0.43
CCC1	YLR220W	AHT1	P29589	182 aa		12.35	□□□□□ -0.43
CCC1	YLR220W	MRPL38	P35996	138 aa	Predicted RBP	12.35	□□□□□ -0.43
CCC1	YLR220W	YBL071C	P38185	102 aa		12.35	□□□□□ -0.43
CCC1	YLR220W	CSH1	P38287	376 aa		12.35	□□□□□ -0.43
CCC1	YLR220W	YAP1802	P53309	568 aa		12.35	□□□□□ -0.43
CCC1	YLR220W	BOR1	P53838	576 aa		12.35	□□□□□ -0.43
CCC1	YLR220W	POM34	Q12445	299 aa		12.35	□□□□□ -0.43

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