RNA–Protein interactions for RNA: YLR197W

NOP56, Transcript of Essential evolutionarily-conserved nucleolar protein, yeastyeast

Gene NOP56, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP56YLR197W DGA1Q08650 418 aa1.91□□□□□ -2.1
NOP56YLR197W RDI1Q12434 202 aa1.91□□□□□ -2.1
NOP56YLR197W SKI3P17883 1432 aaKnown RBP1.9□□□□□ -2.11
NOP56YLR197W RPS28BP0C0X0 67 aaKnown RBP1.9□□□□□ -2.11
NOP56YLR197W OCH1P31755 480 aa1.9□□□□□ -2.11
NOP56YLR197W SNC2P33328 115 aa1.9□□□□□ -2.11
NOP56YLR197W YKL102CP34249 101 aa1.9□□□□□ -2.11
NOP56YLR197W YJL027CP47063 138 aaPredicted RBP1.9□□□□□ -2.11
NOP56YLR197W TDA4P47153 279 aa1.9□□□□□ -2.11
NOP56YLR197W SBH2P52871 88 aa1.9□□□□□ -2.11
NOP56YLR197W DYN3Q04949 312 aa1.9□□□□□ -2.11
NOP56YLR197W RPS28AQ3E7X9 67 aaPredicted RBP1.9□□□□□ -2.11
NOP56YLR197W SEN2P16658 377 aa1.89□□□□□ -2.11
NOP56YLR197W YET1P35723 206 aa1.89□□□□□ -2.11
NOP56YLR197W SRP102P36057 244 aaPredicted RBP1.89□□□□□ -2.11
NOP56YLR197W NRG2P38082 220 aa1.89□□□□□ -2.11
NOP56YLR197W YHR022CP38763 256 aa1.89□□□□□ -2.11
NOP56YLR197W AVT2P39981 480 aa1.89□□□□□ -2.11
NOP56YLR197W TIR3P40552 269 aa1.89□□□□□ -2.11
NOP56YLR197W YJR111CP47148 283 aaKnown RBP1.89□□□□□ -2.11
NOP56YLR197W DOC1P53068 250 aa1.89□□□□□ -2.11
NOP56YLR197W TMA20P89886 181 aaPredicted RBP1.89□□□□□ -2.11
NOP56YLR197W PET20Q99373 253 aa1.89□□□□□ -2.11
NOP56YLR197W ATP15P21306 62 aa1.88□□□□□ -2.11
NOP56YLR197W SVP26P38869 228 aa1.88□□□□□ -2.11
NOP56YLR197W YER134CP40081 178 aa1.88□□□□□ -2.11
NOP56YLR197W SER2P42941 309 aa1.88□□□□□ -2.11
NOP56YLR197W LSM1P47017 172 aaKnown RBP1.88□□□□□ -2.11
NOP56YLR197W CYT2Q00873 224 aa1.88□□□□□ -2.11
NOP56YLR197W YDR476CQ03362 224 aa1.88□□□□□ -2.11
NOP56YLR197W YOR342CQ12182 319 aa1.88□□□□□ -2.11
NOP56YLR197W RAS2P01120 322 aaKnown RBP1.87□□□□□ -2.11
NOP56YLR197W NUF2P33895 451 aa1.87□□□□□ -2.11
NOP56YLR197W FCY21P40039 528 aa1.87□□□□□ -2.11
NOP56YLR197W EFG1Q3E705 233 aaKnown RBP1.87□□□□□ -2.11
NOP56YLR197W YHR086W-AQ3E746 53 aa1.87□□□□□ -2.11
NOP56YLR197W BOL1Q3E793 110 aa1.87□□□□□ -2.11
NOP56YLR197W ODC2Q99297 307 aa1.87□□□□□ -2.11
NOP56YLR197W YIL177CP40434 1758 aa1.87□□□□□ -2.11
NOP56YLR197W YJL225CP40889 1758 aa1.87□□□□□ -2.11
NOP56YLR197W CPA1P07258 411 aaKnown RBP1.86□□□□□ -2.11
NOP56YLR197W SPO13P23624 291 aa1.86□□□□□ -2.11
NOP56YLR197W PAN3P36102 679 aaPredicted RBP1.86□□□□□ -2.11
NOP56YLR197W YBR285WP38354 144 aa1.86□□□□□ -2.11
NOP56YLR197W NSG1P38837 291 aa1.86□□□□□ -2.11
NOP56YLR197W YEA4P40004 342 aa1.86□□□□□ -2.11
NOP56YLR197W YNL217WP40152 326 aa1.86□□□□□ -2.11
NOP56YLR197W RFC2P40348 353 aa1.86□□□□□ -2.11
NOP56YLR197W GPI14P47088 403 aaKnown RBP1.86□□□□□ -2.11
NOP56YLR197W EAF6P47128 113 aa1.86□□□□□ -2.11
NOP56YLR197W XPT1P47165 209 aa1.86□□□□□ -2.11
NOP56YLR197W MPA43P53583 542 aaPredicted RBP1.86□□□□□ -2.11
NOP56YLR197W HSK3P69852 69 aa1.86□□□□□ -2.11
NOP56YLR197W YDR274CP87283 123 aa1.86□□□□□ -2.11
NOP56YLR197W YPR127WQ06494 345 aa1.86□□□□□ -2.11
NOP56YLR197W FSF1Q12029 327 aaKnown RBP1.86□□□□□ -2.11
NOP56YLR197W YLR412C-AQ3E742 68 aa1.86□□□□□ -2.11
NOP56YLR197W DDI2P0CH63 225 aa1.86□□□□□ -2.11
NOP56YLR197W DDI3P0CH64 225 aa1.86□□□□□ -2.11
NOP56YLR197W BUB2P26448 306 aaPredicted RBP1.86□□□□□ -2.11
NOP56YLR197W DSE2P38844 325 aa1.86□□□□□ -2.11
NOP56YLR197W VTC1P40046 129 aaRIP-Chip data1.86□□□□□ -2.11not detected
NOP56YLR197W AGE2P40529 298 aa1.86□□□□□ -2.11
NOP56YLR197W MOG1P47123 218 aa1.86□□□□□ -2.11
NOP56YLR197W BOL2P53082 120 aa1.86□□□□□ -2.11
NOP56YLR197W NQM1P53228 333 aaPredicted RBP1.86□□□□□ -2.11
NOP56YLR197W YOL014WQ08110 124 aa1.86□□□□□ -2.11
NOP56YLR197W YML100W-AQ8TGT0 57 aa1.86□□□□□ -2.11
NOP56YLR197W PDR18P53756 1333 aa1.85□□□□□ -2.11
NOP56YLR197W YCR023CP25351 611 aa1.85□□□□□ -2.11
NOP56YLR197W YDC1Q02896 317 aa1.85□□□□□ -2.11
NOP56YLR197W ECM5Q03214 1411 aa1.85□□□□□ -2.11
NOP56YLR197W YDL180WQ12301 547 aa1.85□□□□□ -2.11
NOP56YLR197W DGK1Q12382 290 aa1.85□□□□□ -2.11
NOP56YLR197W SSN2P38931 1420 aa1.84□□□□□ -2.11
NOP56YLR197W YAR023CD6VPM8 179 aa1.84□□□□□ -2.11
NOP56YLR197W PBI2P0CT04 75 aaKnown RBP1.84□□□□□ -2.11
NOP56YLR197W MDH2P22133 377 aa1.84□□□□□ -2.11
NOP56YLR197W SHE2P36068 246 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
NOP56YLR197W SOK1P40317 901 aa1.84□□□□□ -2.11
NOP56YLR197W PEP8P40335 379 aa1.84□□□□□ -2.11
NOP56YLR197W AYR1P40471 297 aa1.84□□□□□ -2.11
NOP56YLR197W YFL019CP43576 117 aa1.84□□□□□ -2.11
NOP56YLR197W TTI2P47168 421 aa1.84□□□□□ -2.11
NOP56YLR197W YGL101WP53144 215 aa1.84□□□□□ -2.11
NOP56YLR197W YNR077CP53758 84 aa1.84□□□□□ -2.11
NOP56YLR197W VPS71Q03433 280 aa1.84□□□□□ -2.11
NOP56YLR197W PET54P10834 293 aa1.83□□□□□ -2.12
NOP56YLR197W FZF1P32805 299 aa1.83□□□□□ -2.12
NOP56YLR197W SLM6P38343 150 aa1.83□□□□□ -2.12
NOP56YLR197W YAP3P38749 330 aa1.83□□□□□ -2.12
NOP56YLR197W APS3P47064 194 aa1.83□□□□□ -2.12
NOP56YLR197W SPC2Q04969 178 aa1.83□□□□□ -2.12
NOP56YLR197W NAT3Q06504 195 aa1.83□□□□□ -2.12
NOP56YLR197W ATG40Q99325 256 aa1.83□□□□□ -2.12
NOP56YLR197W POR1P04840 283 aaKnown RBP1.82□□□□□ -2.12
NOP56YLR197W POP7P38291 140 aa1.82□□□□□ -2.12
NOP56YLR197W YBR209WP38311 105 aa1.82□□□□□ -2.12
NOP56YLR197W PHB1P40961 287 aa1.82□□□□□ -2.12
NOP56YLR197W SOL1P50278 321 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms