RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C YNR048WP53740 393 aa9.51□□□□□ -0.89
SPT8YLR055C YPR108W-AQ3E7B3 70 aa9.51□□□□□ -0.89
SPT8YLR055C YLR179CQ06252 201 aaKnown RBP9.5□□□□□ -0.89
SPT8YLR055C YOL029CQ08187 201 aa9.5□□□□□ -0.89
SPT8YLR055C FYV7Q12247 151 aa9.5□□□□□ -0.89
SPT8YLR055C YCL001W-BQ96VH2 84 aa9.5□□□□□ -0.89
SPT8YLR055C COQ3P27680 312 aa9.49□□□□□ -0.89
SPT8YLR055C YEL057CP39983 233 aa9.49□□□□□ -0.89
SPT8YLR055C SHO1P40073 367 aa9.49□□□□□ -0.89
SPT8YLR055C PDR17P53844 350 aa9.49□□□□□ -0.89
SPT8YLR055C HHT1P61830 136 aa9.49□□□□□ -0.89
SPT8YLR055C SDC1Q03323 175 aa9.49□□□□□ -0.89
SPT8YLR055C HED1Q03937 162 aa9.49□□□□□ -0.89
SPT8YLR055C YOR186WQ08560 144 aa9.49□□□□□ -0.89
SPT8YLR055C SEC16P48415 2195 aaKnown RBP9.49□□□□□ -0.89
SPT8YLR055C TRP4P07285 380 aaPredicted RBP9.49□□□□□ -0.89
SPT8YLR055C ATG15P25641 520 aa9.49□□□□□ -0.89
SPT8YLR055C PAM18Q07914 168 aa9.49□□□□□ -0.89
SPT8YLR055C YPL264CQ08980 353 aa9.49□□□□□ -0.89
SPT8YLR055C YPL039WQ03080 316 aa9.48□□□□□ -0.89
SPT8YLR055C RPL25P04456 142 aaKnown RBP9.47□□□□□ -0.89
SPT8YLR055C RPS25BP0C0T4 108 aaKnown RBP9.47□□□□□ -0.89
SPT8YLR055C YIL169CP40442 995 aa9.47□□□□□ -0.89
SPT8YLR055C ATC1Q04005 294 aa9.47□□□□□ -0.89
SPT8YLR055C ALG6Q12001 544 aaKnown RBP9.47□□□□□ -0.89
SPT8YLR055C FRE8Q12209 686 aa9.47□□□□□ -0.89
SPT8YLR055C RPS25AQ3E792 108 aaPredicted RBP9.47□□□□□ -0.89
SPT8YLR055C PRP8P33334 2413 aaKnown RBP9.47□□□□□ -0.89
SPT8YLR055C RIB4P50861 169 aaPredicted RBP9.47□□□□□ -0.89
SPT8YLR055C LST7P53237 242 aa9.47□□□□□ -0.89
SPT8YLR055C APS2Q00381 147 aa9.47□□□□□ -0.89
SPT8YLR055C PDX1P16451 410 aa9.46□□□□□ -0.9
SPT8YLR055C DAD3P69850 94 aa9.46□□□□□ -0.9
SPT8YLR055C DAL4Q04895 635 aa9.46□□□□□ -0.9
SPT8YLR055C YPR014CQ6B0W2 109 aa9.46□□□□□ -0.9
SPT8YLR055C NUM1Q00402 2748 aa9.46□□□□□ -0.9
SPT8YLR055C HNT2P49775 206 aa9.45□□□□□ -0.9
SPT8YLR055C FRQ1Q06389 190 aa9.45□□□□□ -0.9
SPT8YLR055C STP4Q07351 490 aa9.45□□□□□ -0.9
SPT8YLR055C YDL218WQ07629 317 aa9.45□□□□□ -0.9
SPT8YLR055C USB1Q12208 290 aaKnown RBP9.45□□□□□ -0.9
SPT8YLR055C Q0144Q9ZZW2 109 aa9.45□□□□□ -0.9
SPT8YLR055C SWD3P38123 315 aa9.45□□□□□ -0.9
SPT8YLR055C HIT1P46973 164 aa9.45□□□□□ -0.9
SPT8YLR055C MSY1P48527 492 aa9.45□□□□□ -0.9
SPT8YLR055C YBR255C-AQ3E776 120 aa9.45□□□□□ -0.9
SPT8YLR055C TRA1P38811 3744 aa9.44□□□□□ -0.9
SPT8YLR055C ILV5P06168 395 aaKnown RBP9.44□□□□□ -0.9
SPT8YLR055C ATP5P09457 212 aa9.44□□□□□ -0.9
SPT8YLR055C URA5P13298 226 aaKnown RBP9.44□□□□□ -0.9
SPT8YLR055C YKL075CP36083 450 aa9.44□□□□□ -0.9
SPT8YLR055C PRY1P47032 299 aa9.44□□□□□ -0.9
SPT8YLR055C TTI2P47168 421 aa9.44□□□□□ -0.9
SPT8YLR055C RCE1Q03530 315 aa9.44□□□□□ -0.9
SPT8YLR055C PIN3Q06449 215 aa9.44□□□□□ -0.9
SPT8YLR055C YDL085C-AQ3E7B7 68 aaKnown RBP9.44□□□□□ -0.9
SPT8YLR055C FLO9P39712 1322 aa9.43□□□□□ -0.9
SPT8YLR055C QCR9P22289 66 aa9.43□□□□□ -0.9
SPT8YLR055C VMA16P23968 213 aa9.43□□□□□ -0.9
SPT8YLR055C DAL3P32459 195 aa9.43□□□□□ -0.9
SPT8YLR055C SHB17P36136 271 aaKnown RBP9.43□□□□□ -0.9
SPT8YLR055C GAT2P40209 560 aa9.43□□□□□ -0.9
SPT8YLR055C POM33Q12164 279 aa9.43□□□□□ -0.9
SPT8YLR055C FMP49A0A023PZB3 126 aa9.42□□□□□ -0.9
SPT8YLR055C YUH1P35127 236 aa9.42□□□□□ -0.9
SPT8YLR055C LOC1P43586 204 aaPredicted RBP9.42□□□□□ -0.9
SPT8YLR055C YNR040WP53736 256 aa9.42□□□□□ -0.9
SPT8YLR055C YGL010WP25338 174 aa9.42□□□□□ -0.9
SPT8YLR055C CCS1P40202 249 aaKnown RBP9.42□□□□□ -0.9
SPT8YLR055C YGR269WP40326 108 aa9.42□□□□□ -0.9
SPT8YLR055C SAE3P89114 91 aa9.42□□□□□ -0.9
SPT8YLR055C STD1Q02794 444 aa9.42□□□□□ -0.9
SPT8YLR055C YOL118CQ08259 102 aa9.42□□□□□ -0.9
SPT8YLR055C YOR192C-CQ3E736 78 aa9.42□□□□□ -0.9
SPT8YLR055C POR1P04840 283 aaKnown RBP9.41□□□□□ -0.9
SPT8YLR055C SOF1P33750 489 aaKnown RBP9.41□□□□□ -0.9
SPT8YLR055C QDR3P38227 689 aa9.41□□□□□ -0.9
SPT8YLR055C GLC8P41818 229 aa9.41□□□□□ -0.9
SPT8YLR055C GEP7P53171 287 aa9.41□□□□□ -0.9
SPT8YLR055C RPN14P53196 417 aa9.41□□□□□ -0.9
SPT8YLR055C ELA1P53861 379 aaPredicted RBP9.41□□□□□ -0.9
SPT8YLR055C YFH1Q07540 174 aa9.41□□□□□ -0.9
SPT8YLR055C PAA1Q12447 191 aaKnown RBP9.41□□□□□ -0.9
SPT8YLR055C RPS16AP0CX51 143 aaKnown RBP9.4□□□□□ -0.9
SPT8YLR055C RPS16BP0CX52 143 aaKnown RBP9.4□□□□□ -0.9
SPT8YLR055C DAD2P36162 133 aa9.4□□□□□ -0.9
SPT8YLR055C YNL165WP53891 406 aa9.4□□□□□ -0.9
SPT8YLR055C DPB4Q04603 196 aaKnown RBP9.4□□□□□ -0.9
SPT8YLR055C NAT3Q06504 195 aa9.4□□□□□ -0.9
SPT8YLR055C NDE2Q07500 545 aa9.4□□□□□ -0.9
SPT8YLR055C RFU1Q08003 200 aa9.4□□□□□ -0.9
SPT8YLR055C GRE1Q08969 168 aa9.4□□□□□ -0.9
SPT8YLR055C SWT1Q12104 458 aa9.4□□□□□ -0.9
SPT8YLR055C USV1Q12132 391 aa9.4□□□□□ -0.9
SPT8YLR055C YPR071WQ12346 211 aa9.4□□□□□ -0.9
SPT8YLR055C PIC2P40035 300 aa9.4□□□□□ -0.91
SPT8YLR055C THI72Q08579 599 aa9.4□□□□□ -0.91
SPT8YLR055C FCY2P17064 533 aa9.39□□□□□ -0.91
SPT8YLR055C YKL107WP34251 309 aa9.39□□□□□ -0.91
SPT8YLR055C PCP1P53259 346 aa9.39□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms