RNA–Protein interactions for RNA: YKR002W

PAP1, Transcript of Poly(A) polymerase, yeast

Gene PAP1, Length 1,707 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAP1	YKR002W	EMI1	Q04406	187 aa		4.62	□□□□□ -1.67
PAP1	YKR002W	YDR124W	Q04608	324 aa		4.62	□□□□□ -1.67
PAP1	YKR002W	YRF1-1	P0CX20	1796 aa		4.62	□□□□□ -1.67
PAP1	YKR002W	YRF1-5	P0CX21	1796 aa		4.62	□□□□□ -1.67
PAP1	YKR002W	YRF1-8	P0CX22	1796 aa		4.62	□□□□□ -1.67
PAP1	YKR002W	ARO7	P32178	256 aa		4.61	□□□□□ -1.67
PAP1	YKR002W	MRPL15	P36523	253 aa		4.61	□□□□□ -1.67
PAP1	YKR002W	ECM14	P38836	430 aa		4.61	□□□□□ -1.67
PAP1	YKR002W	EDC2	P40023	145 aa	Predicted RBP	4.61	□□□□□ -1.67
PAP1	YKR002W	YJR111C	P47148	283 aa	Known RBP	4.61	□□□□□ -1.67
PAP1	YKR002W	GTR2	P53290	341 aa		4.61	□□□□□ -1.67
PAP1	YKR002W	SWT21	P53873	357 aa	Predicted RBP	4.61	□□□□□ -1.67
PAP1	YKR002W	YBL112C	Q3E7Y4	105 aa		4.61	□□□□□ -1.67
PAP1	YKR002W	YAL067W-A	Q8TGK6	75 aa		4.61	□□□□□ -1.67
PAP1	YKR002W	UBR1	P19812	1950 aa		4.61	□□□□□ -1.67
PAP1	YKR002W	YLR462W	O13556	202 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	MRS1	P07266	363 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	YEL075C	P39972	122 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	RRT13	P40042	185 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	YER189W	P40104	122 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	SYS1	P41544	203 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	SER2	P42941	309 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	ERV29	P53337	310 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	RRG7	Q08774	242 aa	Predicted RBP	4.6	□□□□□ -1.67
PAP1	YKR002W	SCP1	Q08873	200 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	YLR053C	Q12026	108 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	NSL1	Q12143	216 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	Q0144	Q9ZZW2	109 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	QCR2	P07257	368 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	APS1	P35181	156 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	MRPL27	P36526	146 aa	Predicted RBP	4.6	□□□□□ -1.67
PAP1	YKR002W	SNN1	P48232	102 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	YDR278C	Q05612	105 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	SPC3	Q12133	184 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	YPS3	Q12303	508 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	YPR014C	Q6B0W2	109 aa		4.6	□□□□□ -1.67
PAP1	YKR002W	YLR422W	Q06409	1932 aa		4.59	□□□□□ -1.67
PAP1	YKR002W	PRE7	P23724	241 aa	Known RBP	4.59	□□□□□ -1.67
PAP1	YKR002W	YBR013C	P38215	129 aa		4.59	□□□□□ -1.67
PAP1	YKR002W	NSE4	P43124	402 aa		4.59	□□□□□ -1.67
PAP1	YKR002W	BUD13	P46947	266 aa	Predicted RBP	4.59	□□□□□ -1.67
PAP1	YKR002W	YGL204C	P53089	101 aa		4.59	□□□□□ -1.67
PAP1	YKR002W	YGL118C	P53132	145 aa		4.59	□□□□□ -1.67
PAP1	YKR002W	YMR315W	Q04869	349 aa	Known RBP	4.59	□□□□□ -1.67
PAP1	YKR002W	YPR127W	Q06494	345 aa		4.59	□□□□□ -1.67
PAP1	YKR002W	RPS1B	P23248	255 aa	Known RBP	4.58	□□□□□ -1.68
PAP1	YKR002W	RNP1	P32385	249 aa		4.58	□□□□□ -1.68
PAP1	YKR002W	RPS1A	P33442	255 aa	Known RBP	4.58	□□□□□ -1.68
PAP1	YKR002W	FIG1	P38224	298 aa		4.58	□□□□□ -1.68
PAP1	YKR002W	NSG1	P38837	291 aa		4.58	□□□□□ -1.68
PAP1	YKR002W	YJL028W	P47062	111 aa		4.58	□□□□□ -1.68
PAP1	YKR002W	YLR179C	Q06252	201 aa	Known RBP	4.58	□□□□□ -1.68
PAP1	YKR002W	YGL194C-A	Q2V2P6	80 aa		4.58	□□□□□ -1.68
PAP1	YKR002W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.58	□□□□□ -1.68
PAP1	YKR002W	TAH1	P25638	111 aa	Predicted RBP	4.58	□□□□□ -1.68
PAP1	YKR002W	AHC2	P25649	128 aa		4.58	□□□□□ -1.68
PAP1	YKR002W	SSS1	P35179	80 aa		4.58	□□□□□ -1.68
PAP1	YKR002W	CAT5	P41735	233 aa		4.58	□□□□□ -1.68
PAP1	YKR002W	YGL262W	P53054	175 aa		4.58	□□□□□ -1.68
PAP1	YKR002W	LDB18	Q07887	179 aa		4.58	□□□□□ -1.68
PAP1	YKR002W	EFG1	Q3E705	233 aa	Known RBP	4.58	□□□□□ -1.68
PAP1	YKR002W	PCC1	Q3E833	88 aa		4.58	□□□□□ -1.68
PAP1	YKR002W	RIB3	Q99258	208 aa		4.58	□□□□□ -1.68
PAP1	YKR002W	COX10	P21592	462 aa		4.57	□□□□□ -1.68
PAP1	YKR002W	PRE1	P22141	198 aa	Known RBP	4.57	□□□□□ -1.68
PAP1	YKR002W	SRB6	P32570	121 aa		4.57	□□□□□ -1.68
PAP1	YKR002W	FMP23	P38231	175 aa		4.57	□□□□□ -1.68
PAP1	YKR002W	ASP1	P38986	381 aa	Predicted RBP	4.57	□□□□□ -1.68
PAP1	YKR002W	YER076C	P40049	302 aa		4.57	□□□□□ -1.68
PAP1	YKR002W	YGR201C	P42936	225 aa		4.57	□□□□□ -1.68
PAP1	YKR002W	MOG1	P47123	218 aa		4.57	□□□□□ -1.68
PAP1	YKR002W	YGL260W	P53056	76 aa		4.57	□□□□□ -1.68
PAP1	YKR002W	MRPS16	Q02608	121 aa		4.57	□□□□□ -1.68
PAP1	YKR002W	EPT1	P22140	391 aa		4.56	□□□□□ -1.68
PAP1	YKR002W	YAE1	P47118	141 aa	Predicted RBP	4.56	□□□□□ -1.68
PAP1	YKR002W	AIM25	P47140	327 aa		4.56	□□□□□ -1.68
PAP1	YKR002W	TIM13	P53299	105 aa		4.56	□□□□□ -1.68
PAP1	YKR002W	YDC1	Q02896	317 aa		4.56	□□□□□ -1.68
PAP1	YKR002W	SEN15	Q04675	128 aa		4.56	□□□□□ -1.68
PAP1	YKR002W	TVP18	Q04767	167 aa		4.56	□□□□□ -1.68
PAP1	YKR002W	IDP1	P21954	428 aa	Known RBP	4.55	□□□□□ -1.68
PAP1	YKR002W	PEX4	P29340	183 aa		4.55	□□□□□ -1.68
PAP1	YKR002W	PRY2	P36110	329 aa		4.55	□□□□□ -1.68
PAP1	YKR002W	GPI18	P38211	433 aa		4.55	□□□□□ -1.68
PAP1	YKR002W	PGD1	P40356	397 aa		4.55	□□□□□ -1.68
PAP1	YKR002W	YGR017W	P53210	297 aa		4.55	□□□□□ -1.68
PAP1	YKR002W	SLM2	P53955	656 aa		4.55	□□□□□ -1.68
PAP1	YKR002W	SAE3	P89114	91 aa		4.55	□□□□□ -1.68
PAP1	YKR002W	YOL160W	Q08321	113 aa		4.55	□□□□□ -1.68
PAP1	YKR002W	YHR214C-E	Q8TGK0	99 aa		4.55	□□□□□ -1.68
PAP1	YKR002W	PRS3	P38689	320 aa	Known RBP	4.55	□□□□□ -1.68
PAP1	YKR002W	YHL044W	P38727	235 aa		4.55	□□□□□ -1.68
PAP1	YKR002W	DOG1	P38774	246 aa		4.55	□□□□□ -1.68
PAP1	YKR002W	IPT1	P38954	527 aa		4.55	□□□□□ -1.68
PAP1	YKR002W	YIL054W	P40524	105 aa		4.55	□□□□□ -1.68
PAP1	YKR002W	YPI1	P43587	155 aa		4.55	□□□□□ -1.68
PAP1	YKR002W	SOL1	P50278	321 aa		4.55	□□□□□ -1.68
PAP1	YKR002W	LSM7	P53905	115 aa	Known RBP	4.55	□□□□□ -1.68
PAP1	YKR002W	INM2	Q05533	292 aa		4.55	□□□□□ -1.68
PAP1	YKR002W	FRQ1	Q06389	190 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms