RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT1	YKL145W	RPL25	P04456	142 aa	Known RBP	4.63	□□□□□ -1.67
RPT1	YKL145W	ZRC1	P20107	442 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	RFA3	P26755	122 aa	Known RBP	4.63	□□□□□ -1.67
RPT1	YKL145W	UTP30	P36144	274 aa	Known RBP	4.63	□□□□□ -1.67
RPT1	YKL145W	YBR220C	P38318	560 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	YHL037C	P38733	133 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	GNA1	P43577	159 aa	Predicted RBP	4.63	□□□□□ -1.67
RPT1	YKL145W	HIT1	P46973	164 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	CRZ1	P53968	678 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	YML018C	Q03730	393 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	YDR248C	Q03786	193 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	YPR098C	Q06089	161 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	YOR186W	Q08560	144 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	YOR385W	Q08909	290 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	PET20	Q99373	253 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	SPS100	P13130	326 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	YCR022C	P25620	114 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	PEX4	P29340	183 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	NAT2	P37293	288 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	MRPL50	P53724	139 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	CAF40	P53829	373 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	YDC1	Q02896	317 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	YDR114C	Q04597	100 aa		4.63	□□□□□ -1.67
RPT1	YKL145W	YTH1	Q06102	208 aa	Predicted RBP	4.63	□□□□□ -1.67
RPT1	YKL145W	RPL42A	P0CX27	106 aa	Known RBP	4.62	□□□□□ -1.67
RPT1	YKL145W	RPL42B	P0CX28	106 aa	Known RBP	4.62	□□□□□ -1.67
RPT1	YKL145W	MRP17	P28778	131 aa		4.62	□□□□□ -1.67
RPT1	YKL145W	POP8	P38208	133 aa		4.62	□□□□□ -1.67
RPT1	YKL145W	COS8	P38723	381 aa		4.62	□□□□□ -1.67
RPT1	YKL145W	VMA22	P38784	181 aa		4.62	□□□□□ -1.67
RPT1	YKL145W	YER137C	P40083	148 aa	Known RBP	4.62	□□□□□ -1.67
RPT1	YKL145W	EGT2	P42835	1041 aa		4.62	□□□□□ -1.67
RPT1	YKL145W	LSM1	P47017	172 aa	Known RBP	4.62	□□□□□ -1.67
RPT1	YKL145W	ALG9	P53868	555 aa	Known RBP	4.62	□□□□□ -1.67
RPT1	YKL145W	YMR279C	Q03263	540 aa		4.62	□□□□□ -1.67
RPT1	YKL145W	PIN3	Q06449	215 aa		4.62	□□□□□ -1.67
RPT1	YKL145W	SYM1	Q06563	197 aa		4.62	□□□□□ -1.67
RPT1	YKL145W	FEX2	Q08991	375 aa		4.62	□□□□□ -1.67
RPT1	YKL145W	CRC1	Q12289	327 aa		4.62	□□□□□ -1.67
RPT1	YKL145W	MPD1	Q12404	318 aa	Known RBP	4.62	□□□□□ -1.67
RPT1	YKL145W	RPS23A	P0CX29	145 aa	Known RBP	4.61	□□□□□ -1.67
RPT1	YKL145W	RPS23B	P0CX30	145 aa		4.61	□□□□□ -1.67
RPT1	YKL145W	IFM1	P25038	676 aa		4.61	□□□□□ -1.67
RPT1	YKL145W	IMP1	P28627	190 aa		4.61	□□□□□ -1.67
RPT1	YKL145W	ZRT1	P32804	376 aa		4.61	□□□□□ -1.67
RPT1	YKL145W	YGP1	P38616	354 aa	Known RBP	4.61	□□□□□ -1.67
RPT1	YKL145W	YMR144W	P40214	342 aa	Known RBP	4.61	□□□□□ -1.67
RPT1	YKL145W	YIL024C	P40543	189 aa		4.61	□□□□□ -1.67
RPT1	YKL145W	SED1	Q01589	338 aa		4.61	□□□□□ -1.67
RPT1	YKL145W	PRM15	Q03262	622 aa		4.61	□□□□□ -1.67
RPT1	YKL145W	ORM2	Q06144	216 aa		4.61	□□□□□ -1.67
RPT1	YKL145W	FEX1	Q08913	375 aa		4.61	□□□□□ -1.67
RPT1	YKL145W	SEN2	P16658	377 aa		4.6	□□□□□ -1.67
RPT1	YKL145W	APA2	P22108	325 aa		4.6	□□□□□ -1.67
RPT1	YKL145W	CPR4	P25334	318 aa		4.6	□□□□□ -1.67
RPT1	YKL145W	OCH1	P31755	480 aa		4.6	□□□□□ -1.67
RPT1	YKL145W	PRS3	P38689	320 aa	Known RBP	4.6	□□□□□ -1.67
RPT1	YKL145W	RTC3	P38804	111 aa	Predicted RBP	4.6	□□□□□ -1.67
RPT1	YKL145W	YMR181C	Q03231	154 aa		4.6	□□□□□ -1.67
RPT1	YKL145W	PLP1	Q04004	230 aa		4.6	□□□□□ -1.67
RPT1	YKL145W	SCP1	Q08873	200 aa		4.6	□□□□□ -1.67
RPT1	YKL145W	FCY22	Q12119	530 aa		4.6	□□□□□ -1.67
RPT1	YKL145W	SAL1	D6W196	494 aa		4.59	□□□□□ -1.67
RPT1	YKL145W	TPI1	P00942	248 aa	Known RBP	4.59	□□□□□ -1.67
RPT1	YKL145W	RPL39	P04650	51 aa		4.59	□□□□□ -1.67
RPT1	YKL145W	RPL31A	P0C2H8	113 aa	Known RBP	4.59	□□□□□ -1.67
RPT1	YKL145W	RPL43A	P0CX25	92 aa	Known RBP	4.59	□□□□□ -1.67
RPT1	YKL145W	RPL43B	P0CX26	92 aa		4.59	□□□□□ -1.67
RPT1	YKL145W	YER190C-B	P0CX94	160 aa		4.59	□□□□□ -1.67
RPT1	YKL145W	YEL077W-A	P0CX95	160 aa		4.59	□□□□□ -1.67
RPT1	YKL145W	YGR296C-B	P0CX96	160 aa		4.59	□□□□□ -1.67
RPT1	YKL145W	YPL283W-B	P0CX97	160 aa		4.59	□□□□□ -1.67
RPT1	YKL145W	YPR204C-A	P0CX98	160 aa		4.59	□□□□□ -1.67
RPT1	YKL145W	CKS1	P20486	150 aa	Known RBP	4.59	□□□□□ -1.67
RPT1	YKL145W	SWD3	P38123	315 aa		4.59	□□□□□ -1.67
RPT1	YKL145W	PRS2	P38620	318 aa	Known RBP	4.59	□□□□□ -1.67
RPT1	YKL145W	ECM14	P38836	430 aa		4.59	□□□□□ -1.67
RPT1	YKL145W	FLO5	P38894	1075 aa		4.59	□□□□□ -1.67
RPT1	YKL145W	SLX9	P53251	210 aa	Predicted RBP	4.59	□□□□□ -1.67
RPT1	YKL145W	RPL15B	P54780	204 aa	Predicted RBP	4.59	□□□□□ -1.67
RPT1	YKL145W	TSA2	Q04120	196 aa		4.59	□□□□□ -1.67
RPT1	YKL145W	YMR254C	Q04838	102 aa		4.59	□□□□□ -1.67
RPT1	YKL145W	COA4	Q05809	96 aa		4.59	□□□□□ -1.67
RPT1	YKL145W	YOR192C-C	Q3E736	78 aa		4.59	□□□□□ -1.67
RPT1	YKL145W	ATG40	Q99325	256 aa		4.59	□□□□□ -1.67
RPT1	YKL145W	YCR101C	P25607	182 aa		4.58	□□□□□ -1.68
RPT1	YKL145W	TRR1	P29509	319 aa	Known RBP	4.58	□□□□□ -1.68
RPT1	YKL145W	IES6	P32617	166 aa		4.58	□□□□□ -1.68
RPT1	YKL145W	RPB7	P34087	171 aa		4.58	□□□□□ -1.68
RPT1	YKL145W	RMD6	P39975	231 aa		4.58	□□□□□ -1.68
RPT1	YKL145W	YER121W	P40076	114 aa		4.58	□□□□□ -1.68
RPT1	YKL145W	CCS1	P40202	249 aa	Known RBP	4.58	□□□□□ -1.68
RPT1	YKL145W	GON7	P46984	123 aa		4.58	□□□□□ -1.68
RPT1	YKL145W	YPL067C	Q02754	198 aa		4.58	□□□□□ -1.68
RPT1	YKL145W	YOL118C	Q08259	102 aa		4.58	□□□□□ -1.68
RPT1	YKL145W	ATX2	Q12067	313 aa		4.58	□□□□□ -1.68
RPT1	YKL145W	FRE8	Q12209	686 aa		4.58	□□□□□ -1.68
RPT1	YKL145W	PRM4	Q12498	284 aa		4.58	□□□□□ -1.68
RPT1	YKL145W	YGL194C-A	Q2V2P6	80 aa		4.58	□□□□□ -1.68
RPT1	YKL145W	PUT1	P09368	476 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms