RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	MIH1	P23748	554 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	YCR006C	P25350	157 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	FEN2	P25621	512 aa	Known RBP	3.09	□□□□□ -1.91
SOD1	YJR104C	TRR1	P29509	319 aa	Known RBP	3.09	□□□□□ -1.91
SOD1	YJR104C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
SOD1	YJR104C	MCH2	P36032	473 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	DAD2	P36162	133 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	MRPL24	P36525	258 aa	Predicted RBP	3.09	□□□□□ -1.91
SOD1	YJR104C	MRPL27	P36526	146 aa	Predicted RBP	3.09	□□□□□ -1.91
SOD1	YJR104C	YBR071W	P38243	211 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	NTC20	P38302	140 aa	Predicted RBP	3.09	□□□□□ -1.91
SOD1	YJR104C	SLM6	P38343	150 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	DOG2	P38773	246 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	YHR127W	P38833	243 aa	Known RBP	3.09	□□□□□ -1.91
SOD1	YJR104C	RPB11	P38902	120 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	SHO1	P40073	367 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	PRM5	P40476	318 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	DUO1	P53168	247 aa	Known RBP	3.09	□□□□□ -1.91
SOD1	YJR104C	TEX1	P53851	422 aa	Known RBP	3.09	□□□□□ -1.91
SOD1	YJR104C	ATG4	P53867	494 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	MET31	Q03081	177 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	CAB5	Q03941	241 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	RPC11	Q04307	110 aa	Predicted RBP	3.09	□□□□□ -1.91
SOD1	YJR104C	TRI1	Q05024	226 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	GRX8	Q05926	109 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	SEI1	Q06058	285 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	DIC1	Q06143	298 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	DCI1	Q08558	271 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	YOR378W	Q08902	515 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	YOR015W	Q12169	119 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	GEP5	Q12393	293 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	YLR149C	Q99296	730 aa		3.09	□□□□□ -1.91
SOD1	YJR104C	ADH1	P00330	348 aa	Known RBP	3.08	□□□□□ -1.92
SOD1	YJR104C	COX5A	P00424	153 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	CPA1	P07258	411 aa	Known RBP	3.08	□□□□□ -1.92
SOD1	YJR104C	SAG1	P20840	650 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	MAK32	P23060	363 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	MEK1	P24719	497 aa	Predicted RBP	3.08	□□□□□ -1.92
SOD1	YJR104C	YMC1	P32331	307 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	ERG24	P32462	438 aa	Known RBP	3.08	□□□□□ -1.92
SOD1	YJR104C	UGX2	P32772	223 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	MDL1	P33310	695 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	SLC1	P33333	303 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	SOR1	P35497	357 aa	Known RBP	3.08	□□□□□ -1.92
SOD1	YJR104C	ECM33	P38248	429 aa	Known RBP	3.08	□□□□□ -1.92
SOD1	YJR104C	UMP1	P38293	148 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	YHR130C	P38834	111 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	YEA4	P40004	342 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	PRE5	P40302	234 aa	Known RBP	3.08	□□□□□ -1.92
SOD1	YJR104C	SEC24	P40482	926 aa	Known RBP	3.08	□□□□□ -1.92
SOD1	YJR104C	URM1	P40554	99 aa	Predicted RBP	3.08	□□□□□ -1.92
SOD1	YJR104C	CIN2	P46670	268 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	UBP8	P50102	471 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	YIP4	P53093	235 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	ERG26	P53199	349 aa	Known RBP	3.08	□□□□□ -1.92
SOD1	YJR104C	PGA1	P53896	198 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	PIR3	Q03180	325 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	YML079W	Q03629	201 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	ECM18	Q04623	453 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	POS5	Q06892	414 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	SOR2	Q07786	357 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	YPL162C	Q12042	273 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	MCP1	Q12106	302 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	NPC2	Q12408	173 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	YLR363W-A	Q3E747	85 aa		3.08	□□□□□ -1.92
SOD1	YJR104C	DET1	Q99288	334 aa	Known RBP	3.08	□□□□□ -1.92
SOD1	YJR104C	YPR096C	O13587	100 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	YPT1	P01123	206 aa	Known RBP	3.07	□□□□□ -1.92
SOD1	YJR104C	POR1	P04840	283 aa	Known RBP	3.07	□□□□□ -1.92
SOD1	YJR104C	RPS13	P05756	151 aa	Known RBP	3.07	□□□□□ -1.92
SOD1	YJR104C	PAU1	P0CE88	120 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	PAU14	P0CE89	120 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	PAU6	P0CE90	120 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	PAU18	P0CE91	120 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	PAU8	P0CE92	120 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	PAU11	P0CE93	120 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	INO4	P13902	151 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	CBS1	P14066	229 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	OLE1	P21147	510 aa	Known RBP	3.07	□□□□□ -1.92
SOD1	YJR104C	GAS1	P22146	559 aa	Known RBP	3.07	□□□□□ -1.92
SOD1	YJR104C	HYP2	P23301	157 aa	Known RBP	3.07	□□□□□ -1.92
SOD1	YJR104C	PHD1	P36093	366 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	CBP4	P37267	147 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	MOH1	P38191	138 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	PAU13	P38725	120 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	YHL041W	P38730	149 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	FYV4	P38783	130 aa	Predicted RBP	3.07	□□□□□ -1.92
SOD1	YJR104C	GPP2	P40106	250 aa	Known RBP	3.07	□□□□□ -1.92
SOD1	YJR104C	YNL198C	P40166	100 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	MSL1	P40567	111 aa	Predicted RBP	3.07	□□□□□ -1.92
SOD1	YJR104C	OTU1	P43558	301 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	TIS11	P47977	285 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	SBH2	P52871	88 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	PAU4	P53427	120 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	YNL140C	P53910	189 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	PAU10	Q03050	120 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	GIS1	Q03833	894 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	TSA2	Q04120	196 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	COQ11	Q05892	277 aa		3.07	□□□□□ -1.92
SOD1	YJR104C	YPR174C	Q06616	221 aa	Predicted RBP	3.07	□□□□□ -1.92

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