RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C ARO7P32178 256 aa3.26□□□□□ -1.89
YIR043CYIR043C FMP23P38231 175 aa3.26□□□□□ -1.89
YIR043CYIR043C AGE2P40529 298 aa3.26□□□□□ -1.89
YIR043CYIR043C TMA22P47089 198 aaPredicted RBP3.26□□□□□ -1.89
YIR043CYIR043C TDA4P47153 279 aa3.26□□□□□ -1.89
YIR043CYIR043C PGA1P53896 198 aa3.26□□□□□ -1.89
YIR043CYIR043C NUP49Q02199 472 aa3.26□□□□□ -1.89
YIR043CYIR043C PDR18P53756 1333 aa3.25□□□□□ -1.89
YIR043CYIR043C POR1P04840 283 aaKnown RBP3.25□□□□□ -1.89
YIR043CYIR043C YKL102CP34249 101 aa3.25□□□□□ -1.89
YIR043CYIR043C KDX1P36005 433 aa3.25□□□□□ -1.89
YIR043CYIR043C YER134CP40081 178 aa3.25□□□□□ -1.89
YIR043CYIR043C YMR099CQ03161 297 aaKnown RBP3.25□□□□□ -1.89
YIR043CYIR043C GPI17Q04080 534 aa3.25□□□□□ -1.89
YIR043CYIR043C DYN3Q04949 312 aa3.25□□□□□ -1.89
YIR043CYIR043C MPD1Q12404 318 aaKnown RBP3.25□□□□□ -1.89
YIR043CYIR043C QCR2P07257 368 aa3.24□□□□□ -1.89
YIR043CYIR043C FCY21P40039 528 aa3.24□□□□□ -1.89
YIR043CYIR043C YOR342CQ12182 319 aa3.24□□□□□ -1.89
YIR043CYIR043C YHR086W-AQ3E746 53 aa3.24□□□□□ -1.89
YIR043CYIR043C YAR023CD6VPM8 179 aa3.23□□□□□ -1.89
YIR043CYIR043C FES1P38260 290 aa3.23□□□□□ -1.89
YIR043CYIR043C SVP26P38869 228 aa3.23□□□□□ -1.89
YIR043CYIR043C HPT1Q04178 221 aaKnown RBP3.23□□□□□ -1.89
YIR043CYIR043C DDI2P0CH63 225 aa3.22□□□□□ -1.89
YIR043CYIR043C DDI3P0CH64 225 aa3.22□□□□□ -1.89
YIR043CYIR043C FZF1P32805 299 aa3.22□□□□□ -1.89
YIR043CYIR043C NRG2P38082 220 aa3.22□□□□□ -1.89
YIR043CYIR043C GPI14P47088 403 aaKnown RBP3.22□□□□□ -1.89
YIR043CYIR043C ATG40Q99325 256 aa3.22□□□□□ -1.89
YIR043CYIR043C AME1P38313 324 aa3.21□□□□□ -1.9
YIR043CYIR043C MTW1P39731 289 aa3.21□□□□□ -1.9
YIR043CYIR043C MPC3P53311 146 aa3.21□□□□□ -1.9
YIR043CYIR043C CMD1P06787 147 aaKnown RBP3.2□□□□□ -1.9
YIR043CYIR043C SHE2P36068 246 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
YIR043CYIR043C TVP23P38962 199 aa3.2□□□□□ -1.9
YIR043CYIR043C VTC1P40046 129 aaRIP-Chip data3.2□□□□□ -1.9not detected
YIR043CYIR043C YFL019CP43576 117 aa3.2□□□□□ -1.9
YIR043CYIR043C PLP1Q04004 230 aa3.2□□□□□ -1.9
YIR043CYIR043C NAT3Q06504 195 aa3.2□□□□□ -1.9
YIR043CYIR043C MET5P47169 1442 aa3.19□□□□□ -1.9
YIR043CYIR043C TVP38P36164 337 aa3.19□□□□□ -1.9
YIR043CYIR043C YBR209WP38311 105 aa3.19□□□□□ -1.9
YIR043CYIR043C NSG1P38837 291 aa3.19□□□□□ -1.9
YIR043CYIR043C DSE2P38844 325 aa3.19□□□□□ -1.9
YIR043CYIR043C VPS71Q03433 280 aa3.19□□□□□ -1.9
YIR043CYIR043C YLR236CA0A023PZG4 107 aa3.18□□□□□ -1.9
YIR043CYIR043C NSP1P14907 823 aaKnown RBP3.18□□□□□ -1.9
YIR043CYIR043C RFC2P40348 353 aa3.18□□□□□ -1.9
YIR043CYIR043C YGL235WP53071 178 aa3.18□□□□□ -1.9
YIR043CYIR043C EFM5P53200 248 aaKnown RBP3.18□□□□□ -1.9
YIR043CYIR043C YMR295CQ03559 197 aa3.18□□□□□ -1.9
YIR043CYIR043C SPO13P23624 291 aa3.17□□□□□ -1.9
YIR043CYIR043C GAA1P39012 614 aa3.17□□□□□ -1.9
YIR043CYIR043C SML1Q04964 104 aa3.17□□□□□ -1.9
YIR043CYIR043C DGK1Q12382 290 aa3.17□□□□□ -1.9
YIR043CYIR043C MDH2P22133 377 aa3.16□□□□□ -1.9
YIR043CYIR043C ERJ5P43613 295 aaPredicted RBP3.16□□□□□ -1.9
YIR043CYIR043C SAY1P53324 424 aa3.16□□□□□ -1.9
YIR043CYIR043C YLR412C-AQ3E742 68 aa3.16□□□□□ -1.9
YIR043CYIR043C BOL1Q3E793 110 aa3.16□□□□□ -1.9
YIR043CYIR043C RPS28BP0C0X0 67 aaKnown RBP3.15□□□□□ -1.91
YIR043CYIR043C YFH7P43591 353 aa3.15□□□□□ -1.91
YIR043CYIR043C SOL1P50278 321 aa3.15□□□□□ -1.91
YIR043CYIR043C CUE4Q04201 117 aaPredicted RBP3.15□□□□□ -1.91
YIR043CYIR043C YLR053CQ12026 108 aa3.15□□□□□ -1.91
YIR043CYIR043C RPS28AQ3E7X9 67 aaPredicted RBP3.15□□□□□ -1.91
YIR043CYIR043C PEP8P40335 379 aa3.14□□□□□ -1.91
YIR043CYIR043C AYR1P40471 297 aa3.14□□□□□ -1.91
YIR043CYIR043C HSK3P69852 69 aa3.14□□□□□ -1.91
YIR043CYIR043C SHH3Q04487 196 aa3.14□□□□□ -1.91
YIR043CYIR043C FYV12Q08559 129 aa3.14□□□□□ -1.91
YIR043CYIR043C RDI1Q12434 202 aa3.14□□□□□ -1.91
YIR043CYIR043C TIR1P10863 254 aa3.13□□□□□ -1.91
YIR043CYIR043C UBC6P33296 250 aaPredicted RBP3.13□□□□□ -1.91
YIR043CYIR043C CUP9P41817 306 aa3.13□□□□□ -1.91
YIR043CYIR043C YFR054CP43622 192 aa3.13□□□□□ -1.91
YIR043CYIR043C KNH1P50112 268 aa3.13□□□□□ -1.91
YIR043CYIR043C SBH1P52870 82 aa3.13□□□□□ -1.91
YIR043CYIR043C DIG2Q03373 323 aaKnown RBP3.13□□□□□ -1.91
YIR043CYIR043C RAD28Q12021 506 aa3.13□□□□□ -1.91
YIR043CYIR043C TFC1P32367 649 aa3.12□□□□□ -1.91
YIR043CYIR043C SPC25P40014 221 aa3.12□□□□□ -1.91
YIR043CYIR043C BUD25P85052 153 aa3.12□□□□□ -1.91
YIR043CYIR043C MAK3Q03503 176 aa3.12□□□□□ -1.91
YIR043CYIR043C YMR253CQ04835 414 aa3.12□□□□□ -1.91
YIR043CYIR043C IRC23Q08416 157 aa3.12□□□□□ -1.91
YIR043CYIR043C YDL180WQ12301 547 aa3.12□□□□□ -1.91
YIR043CYIR043C PAM17P36147 197 aa3.11□□□□□ -1.91
YIR043CYIR043C FIG1P38224 298 aa3.11□□□□□ -1.91
YIR043CYIR043C DER1P38307 211 aa3.11□□□□□ -1.91
YIR043CYIR043C VMA22P38784 181 aa3.11□□□□□ -1.91
YIR043CYIR043C EDC3P39998 551 aaKnown RBP3.11□□□□□ -1.91
YIR043CYIR043C TTI2P47168 421 aa3.11□□□□□ -1.91
YIR043CYIR043C POP3P53833 195 aaPredicted RBP3.11□□□□□ -1.91
YIR043CYIR043C IGO1P53897 168 aa3.11□□□□□ -1.91
YIR043CYIR043C FLO9P39712 1322 aa3.11□□□□□ -1.91
YIR043CYIR043C MPA43P53583 542 aaPredicted RBP3.1□□□□□ -1.91
YIR043CYIR043C TMA20P89886 181 aaPredicted RBP3.1□□□□□ -1.91
YIR043CYIR043C SEC11P15367 167 aa3.09□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms