RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W FIP1P45976 327 aa-0.19□□□□□ -2.44
CSE1YGL238W KAP114P53067 1004 aa-0.19□□□□□ -2.44
CSE1YGL238W SLX9P53251 210 aaPredicted RBP-0.19□□□□□ -2.44
CSE1YGL238W CWC27Q02770 301 aa-0.19□□□□□ -2.44
CSE1YGL238W PRP11Q07350 266 aaPredicted RBP-0.19□□□□□ -2.44
CSE1YGL238W CDC37P06101 506 aaKnown RBP-0.2□□□□□ -2.44
CSE1YGL238W SSO2P39926 295 aa-0.2□□□□□ -2.44
CSE1YGL238W YNL217WP40152 326 aa-0.2□□□□□ -2.44
CSE1YGL238W RRG8Q06109 277 aa-0.2□□□□□ -2.44
CSE1YGL238W SYC1Q08553 188 aaPredicted RBP-0.2□□□□□ -2.44
CSE1YGL238W NIP7Q08962 181 aaKnown RBP-0.2□□□□□ -2.44
CSE1YGL238W YCT1Q12235 531 aa-0.2□□□□□ -2.44
CSE1YGL238W GPI12P23797 304 aa-0.2□□□□□ -2.44
CSE1YGL238W ERG24P32462 438 aaKnown RBP-0.2□□□□□ -2.44
CSE1YGL238W MRPL39P36533 70 aa-0.2□□□□□ -2.44
CSE1YGL238W YIA6P40556 373 aa-0.2□□□□□ -2.44
CSE1YGL238W GCD14P46959 383 aaPredicted RBP-0.2□□□□□ -2.44
CSE1YGL238W LOH1P47055 219 aa-0.2□□□□□ -2.44
CSE1YGL238W ALG11P53954 548 aaKnown RBP-0.2□□□□□ -2.44
CSE1YGL238W PET191Q02772 108 aa-0.2□□□□□ -2.44
CSE1YGL238W FYV12Q08559 129 aa-0.2□□□□□ -2.44
CSE1YGL238W YPR203WQ08994 102 aa-0.2□□□□□ -2.44
CSE1YGL238W YBL008W-AQ3E821 79 aa-0.2□□□□□ -2.44
CSE1YGL238W KTI11Q3E840 82 aa-0.2□□□□□ -2.44
CSE1YGL238W KSS1P14681 368 aa-0.2□□□□□ -2.44
CSE1YGL238W IRC22P40006 225 aa-0.2□□□□□ -2.44
CSE1YGL238W HOC1P47124 396 aa-0.2□□□□□ -2.44
CSE1YGL238W KNH1P50112 268 aa-0.2□□□□□ -2.44
CSE1YGL238W SPG4Q04438 115 aa-0.2□□□□□ -2.44
CSE1YGL238W YLR179CQ06252 201 aaKnown RBP-0.2□□□□□ -2.44
CSE1YGL238W GRE1Q08969 168 aa-0.2□□□□□ -2.44
CSE1YGL238W EDC3P39998 551 aaKnown RBP-0.21□□□□□ -2.44
CSE1YGL238W SMB1P40018 196 aaKnown RBP-0.21□□□□□ -2.44
CSE1YGL238W YLR460CP54007 376 aa-0.21□□□□□ -2.44
CSE1YGL238W YDR391CQ04170 232 aa-0.21□□□□□ -2.44
CSE1YGL238W ATG39Q06159 398 aa-0.21□□□□□ -2.44
CSE1YGL238W BER1Q06688 274 aaKnown RBP-0.21□□□□□ -2.44
CSE1YGL238W PRM3Q08931 133 aa-0.21□□□□□ -2.44
CSE1YGL238W GPM2Q12008 311 aa-0.21□□□□□ -2.44
CSE1YGL238W YLR307C-AQ3E825 87 aa-0.21□□□□□ -2.44
CSE1YGL238W ECM31P38122 312 aa-0.21□□□□□ -2.44
CSE1YGL238W GOS1P38736 223 aa-0.21□□□□□ -2.44
CSE1YGL238W RRF1P38771 230 aa-0.21□□□□□ -2.44
CSE1YGL238W DOG2P38773 246 aa-0.21□□□□□ -2.44
CSE1YGL238W ARO8P53090 500 aaKnown RBP-0.21□□□□□ -2.44
CSE1YGL238W FSF1Q12029 327 aaKnown RBP-0.21□□□□□ -2.44
CSE1YGL238W POM33Q12164 279 aa-0.21□□□□□ -2.44
CSE1YGL238W YDL180WQ12301 547 aa-0.21□□□□□ -2.44
CSE1YGL238W YFR010W-AP0C5N0 62 aa-0.22□□□□□ -2.44
CSE1YGL238W YKL075CP36083 450 aa-0.22□□□□□ -2.44
CSE1YGL238W HSM3P38348 480 aa-0.22□□□□□ -2.44
CSE1YGL238W MNN9P39107 395 aaKnown RBP-0.22□□□□□ -2.44
CSE1YGL238W GLR1P41921 483 aaKnown RBP-0.22□□□□□ -2.44
CSE1YGL238W EMC2P47133 292 aaKnown RBP-0.22□□□□□ -2.44
CSE1YGL238W DID2P69771 204 aa-0.22□□□□□ -2.44
CSE1YGL238W SPO19Q03029 223 aa-0.22□□□□□ -2.44
CSE1YGL238W COA3Q3E7B2 85 aa-0.22□□□□□ -2.44
CSE1YGL238W TPM1P17536 199 aaKnown RBP-0.22□□□□□ -2.44
CSE1YGL238W SHE2P36068 246 aaKnown RBP RIP-Chip data-0.22□□□□□ -2.44not detected
CSE1YGL238W AIF1P52923 378 aa-0.22□□□□□ -2.44
CSE1YGL238W COX12Q01519 83 aa-0.22□□□□□ -2.44
CSE1YGL238W SPP2Q02521 185 aa-0.22□□□□□ -2.44
CSE1YGL238W YHP1Q04116 353 aa-0.22□□□□□ -2.44
CSE1YGL238W KAP95Q06142 861 aaKnown RBP-0.22□□□□□ -2.44
CSE1YGL238W GPN3Q06543 272 aa-0.22□□□□□ -2.44
CSE1YGL238W TIR1P10863 254 aa-0.23□□□□□ -2.45
CSE1YGL238W RPC25P35718 212 aa-0.23□□□□□ -2.45
CSE1YGL238W YJL218WP40892 196 aaKnown RBP-0.23□□□□□ -2.45
CSE1YGL238W GCN20P43535 752 aaKnown RBP-0.23□□□□□ -2.45
CSE1YGL238W SNZ3P43545 298 aa-0.23□□□□□ -2.45
CSE1YGL238W RMR1P53060 241 aa-0.23□□□□□ -2.45
CSE1YGL238W MMS2P53152 137 aa-0.23□□□□□ -2.45
CSE1YGL238W CPD1P53314 239 aa-0.23□□□□□ -2.45
CSE1YGL238W PIR1Q03178 341 aa-0.23□□□□□ -2.45
CSE1YGL238W MGR3Q04472 501 aa-0.23□□□□□ -2.45
CSE1YGL238W YDR124WQ04608 324 aa-0.23□□□□□ -2.45
CSE1YGL238W HOR7Q05827 59 aa-0.23□□□□□ -2.45
CSE1YGL238W ATG10Q07879 167 aa-0.23□□□□□ -2.45
CSE1YGL238W CCW12Q12127 133 aa-0.23□□□□□ -2.45
CSE1YGL238W RHO1P06780 209 aaKnown RBP-0.23□□□□□ -2.45
CSE1YGL238W TCP1P12612 559 aaKnown RBP-0.23□□□□□ -2.45
CSE1YGL238W MEK1P24719 497 aaPredicted RBP-0.23□□□□□ -2.45
CSE1YGL238W HOM6P31116 359 aaKnown RBP-0.23□□□□□ -2.45
CSE1YGL238W TFC1P32367 649 aa-0.23□□□□□ -2.45
CSE1YGL238W HYM1P32464 399 aa-0.23□□□□□ -2.45
CSE1YGL238W FZO1P38297 855 aa-0.23□□□□□ -2.45
CSE1YGL238W YER034WP40022 185 aaKnown RBP-0.23□□□□□ -2.45
CSE1YGL238W YAR1P46683 200 aa-0.23□□□□□ -2.45
CSE1YGL238W YNL010WP53981 241 aaKnown RBP-0.23□□□□□ -2.45
CSE1YGL238W YKR005CQ02203 525 aa-0.23□□□□□ -2.45
CSE1YGL238W ERV41Q04651 352 aa-0.23□□□□□ -2.45
CSE1YGL238W RAF1Q06891 181 aa-0.23□□□□□ -2.45
CSE1YGL238W ILV1P00927 576 aaKnown RBP-0.24□□□□□ -2.45
CSE1YGL238W SEC11P15367 167 aa-0.24□□□□□ -2.45
CSE1YGL238W STF2P16965 84 aa-0.24□□□□□ -2.45
CSE1YGL238W DBP3P20447 523 aaKnown RBP-0.24□□□□□ -2.45
CSE1YGL238W YNL194CP40169 301 aa-0.24□□□□□ -2.45
CSE1YGL238W YJR149WP47177 404 aa-0.24□□□□□ -2.45
CSE1YGL238W GEP7P53171 287 aa-0.24□□□□□ -2.45
CSE1YGL238W VOA1P53262 265 aa-0.24□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms