RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W YLR050CQ12155 161 aaKnown RBP1.82□□□□□ -2.12
SEC4YFL005W SEC14P24280 304 aaKnown RBP1.81□□□□□ -2.12
SEC4YFL005W TRX3P25372 127 aa1.81□□□□□ -2.12
SEC4YFL005W TAH1P25638 111 aaPredicted RBP1.81□□□□□ -2.12
SEC4YFL005W YBR209WP38311 105 aa1.81□□□□□ -2.12
SEC4YFL005W VMA22P38784 181 aa1.81□□□□□ -2.12
SEC4YFL005W GLE2P40066 365 aa1.81□□□□□ -2.12
SEC4YFL005W YFH7P43591 353 aa1.81□□□□□ -2.12
SEC4YFL005W YGL235WP53071 178 aa1.81□□□□□ -2.12
SEC4YFL005W YGR042WP53227 271 aa1.81□□□□□ -2.12
SEC4YFL005W NUP49Q02199 472 aa1.81□□□□□ -2.12
SEC4YFL005W SNO1Q03144 224 aa1.81□□□□□ -2.12
SEC4YFL005W NOC4Q06512 552 aaPredicted RBP1.81□□□□□ -2.12
SEC4YFL005W YLR031WQ07978 186 aa1.81□□□□□ -2.12
SEC4YFL005W GRE1Q08969 168 aa1.81□□□□□ -2.12
SEC4YFL005W ATG40Q99325 256 aa1.81□□□□□ -2.12
SEC4YFL005W PDR18P53756 1333 aa1.81□□□□□ -2.12
SEC4YFL005W MBF1O14467 151 aaKnown RBP1.8□□□□□ -2.12
SEC4YFL005W CMD1P06787 147 aaKnown RBP1.8□□□□□ -2.12
SEC4YFL005W NUF2P33895 451 aa1.8□□□□□ -2.12
SEC4YFL005W DER1P38307 211 aa1.8□□□□□ -2.12
SEC4YFL005W YER121WP40076 114 aa1.8□□□□□ -2.12
SEC4YFL005W YER135CP40082 130 aa1.8□□□□□ -2.12
SEC4YFL005W SAY1P53324 424 aa1.8□□□□□ -2.12
SEC4YFL005W GRX8Q05926 109 aa1.8□□□□□ -2.12
SEC4YFL005W YOL024WQ08172 172 aa1.8□□□□□ -2.12
SEC4YFL005W NSL1Q12143 216 aa1.8□□□□□ -2.12
SEC4YFL005W RIO1Q12196 484 aaKnown RBP1.8□□□□□ -2.12
SEC4YFL005W PET20Q99373 253 aa1.8□□□□□ -2.12
SEC4YFL005W IGO2Q9P305 131 aa1.8□□□□□ -2.12
SEC4YFL005W CPA1P07258 411 aaKnown RBP1.79□□□□□ -2.12
SEC4YFL005W YCR090CP25654 182 aaKnown RBP1.79□□□□□ -2.12
SEC4YFL005W OCH1P31755 480 aa1.79□□□□□ -2.12
SEC4YFL005W TFC1P32367 649 aa1.79□□□□□ -2.12
SEC4YFL005W YBR219CP38317 127 aa1.79□□□□□ -2.12
SEC4YFL005W CIN5P40917 295 aa1.79□□□□□ -2.12
SEC4YFL005W FMP32P43557 207 aa1.79□□□□□ -2.12
SEC4YFL005W YGL204CP53089 101 aa1.79□□□□□ -2.12
SEC4YFL005W TMA20P89886 181 aaPredicted RBP1.79□□□□□ -2.12
SEC4YFL005W ARO80Q04052 950 aa1.79□□□□□ -2.12
SEC4YFL005W PEX11Q12462 236 aa1.79□□□□□ -2.12
SEC4YFL005W ODC2Q99297 307 aa1.79□□□□□ -2.12
SEC4YFL005W MET5P47169 1442 aa1.79□□□□□ -2.12
SEC4YFL005W FLO9P39712 1322 aa1.78□□□□□ -2.12
SEC4YFL005W PBI2P0CT04 75 aaKnown RBP1.78□□□□□ -2.12
SEC4YFL005W PET54P10834 293 aa1.78□□□□□ -2.12
SEC4YFL005W SNF4P12904 322 aa1.78□□□□□ -2.12
SEC4YFL005W BUB2P26448 306 aaPredicted RBP1.78□□□□□ -2.12
SEC4YFL005W TMA19P35691 167 aaKnown RBP1.78□□□□□ -2.12
SEC4YFL005W AIM2P39721 246 aa1.78□□□□□ -2.12
SEC4YFL005W SKI6P46948 246 aaPredicted RBP1.78□□□□□ -2.12
SEC4YFL005W ARP3P47117 449 aaKnown RBP1.78□□□□□ -2.12
SEC4YFL005W MOG1P47123 218 aa1.78□□□□□ -2.12
SEC4YFL005W NQM1P53228 333 aaPredicted RBP1.78□□□□□ -2.12
SEC4YFL005W POP3P53833 195 aaPredicted RBP1.78□□□□□ -2.12
SEC4YFL005W YNL184CP53876 108 aa1.78□□□□□ -2.12
SEC4YFL005W ANT1Q06497 328 aa1.78□□□□□ -2.12
SEC4YFL005W YPR014CQ6B0W2 109 aa1.78□□□□□ -2.12
SEC4YFL005W CYR1P08678 2026 aaKnown RBP1.78□□□□□ -2.13
SEC4YFL005W YLR236CA0A023PZG4 107 aa1.77□□□□□ -2.13
SEC4YFL005W RPS24AP0CX31 135 aaKnown RBP1.77□□□□□ -2.13
SEC4YFL005W RPS24BP0CX32 135 aaKnown RBP1.77□□□□□ -2.13
SEC4YFL005W SEN2P16658 377 aa1.77□□□□□ -2.13
SEC4YFL005W IDP1P21954 428 aaKnown RBP1.77□□□□□ -2.13
SEC4YFL005W OPY1P38271 328 aa1.77□□□□□ -2.13
SEC4YFL005W EDC3P39998 551 aaKnown RBP1.77□□□□□ -2.13
SEC4YFL005W ERJ5P43613 295 aaPredicted RBP1.77□□□□□ -2.13
SEC4YFL005W PKR1Q03880 122 aaKnown RBP1.77□□□□□ -2.13
SEC4YFL005W HPT1Q04178 221 aaKnown RBP1.77□□□□□ -2.13
SEC4YFL005W YMR315WQ04869 349 aaKnown RBP1.77□□□□□ -2.13
SEC4YFL005W DYN3Q04949 312 aa1.77□□□□□ -2.13
SEC4YFL005W YLR162WQ06235 118 aa1.77□□□□□ -2.13
SEC4YFL005W RDI1Q12434 202 aa1.77□□□□□ -2.13
SEC4YFL005W ECM5Q03214 1411 aa1.76□□□□□ -2.13
SEC4YFL005W YOL162WP0CF19 215 aa1.76□□□□□ -2.13
SEC4YFL005W UPS2P35200 230 aa1.76□□□□□ -2.13
SEC4YFL005W YEA4P40004 342 aa1.76□□□□□ -2.13
SEC4YFL005W YER076CP40049 302 aa1.76□□□□□ -2.13
SEC4YFL005W SER2P42941 309 aa1.76□□□□□ -2.13
SEC4YFL005W KNH1P50112 268 aa1.76□□□□□ -2.13
SEC4YFL005W UBC12P52491 188 aa1.76□□□□□ -2.13
SEC4YFL005W AIM34Q03673 198 aa1.76□□□□□ -2.13
SEC4YFL005W RAV2Q03956 351 aa1.76□□□□□ -2.13
SEC4YFL005W CUE4Q04201 117 aaPredicted RBP1.76□□□□□ -2.13
SEC4YFL005W SHH4Q06236 168 aa1.76□□□□□ -2.13
SEC4YFL005W CSI2Q08054 341 aa1.76□□□□□ -2.13
SEC4YFL005W DGA1Q08650 418 aa1.76□□□□□ -2.13
SEC4YFL005W EFG1Q3E705 233 aaKnown RBP1.76□□□□□ -2.13
SEC4YFL005W YOR1P53049 1477 aa1.75□□□□□ -2.13
SEC4YFL005W YGL010WP25338 174 aa1.75□□□□□ -2.13
SEC4YFL005W PAN3P36102 679 aaPredicted RBP1.75□□□□□ -2.13
SEC4YFL005W TVP38P36164 337 aa1.75□□□□□ -2.13
SEC4YFL005W NVJ1P38881 321 aa1.75□□□□□ -2.13
SEC4YFL005W ARO8P53090 500 aaKnown RBP1.75□□□□□ -2.13
SEC4YFL005W YDC1Q02896 317 aa1.75□□□□□ -2.13
SEC4YFL005W POR1P04840 283 aaKnown RBP1.74□□□□□ -2.13
SEC4YFL005W NHP6AP11632 93 aaKnown RBP1.74□□□□□ -2.13
SEC4YFL005W AHC2P25649 128 aa1.74□□□□□ -2.13
SEC4YFL005W CLG1P35190 452 aa1.74□□□□□ -2.13
SEC4YFL005W YKR045CP36138 183 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 80.7 ms