RNA–Protein interactions for RNA: YER162C

RAD4, Transcript of Protein that recognizes and binds damaged DNA (with Rad23p) during NER, yeast

Gene RAD4, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD4	YER162C	PAN3	P36102	679 aa	Predicted RBP	3.02	□□□□□ -1.93
RAD4	YER162C	ARC40	P38328	384 aa	Known RBP	3.02	□□□□□ -1.93
RAD4	YER162C	RPS20	P38701	121 aa	Known RBP	3.02	□□□□□ -1.93
RAD4	YER162C	MOB2	P43563	287 aa		3.02	□□□□□ -1.93
RAD4	YER162C	HMS2	P47175	358 aa		3.02	□□□□□ -1.93
RAD4	YER162C	ARO8	P53090	500 aa	Known RBP	3.02	□□□□□ -1.93
RAD4	YER162C	GPI15	P53961	229 aa		3.02	□□□□□ -1.93
RAD4	YER162C	HSK3	P69852	69 aa		3.02	□□□□□ -1.93
RAD4	YER162C	LGE1	Q02796	332 aa	Known RBP	3.02	□□□□□ -1.93
RAD4	YER162C	TMA23	Q03525	211 aa		3.02	□□□□□ -1.93
RAD4	YER162C	YMR166C	Q03829	368 aa		3.02	□□□□□ -1.93
RAD4	YER162C	TSA2	Q04120	196 aa		3.02	□□□□□ -1.93
RAD4	YER162C	RDL2	Q08742	149 aa	Known RBP	3.02	□□□□□ -1.93
RAD4	YER162C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
RAD4	YER162C	TY1A-BL	Q12266	440 aa		3.02	□□□□□ -1.93
RAD4	YER162C	TRM10	Q12400	293 aa		3.02	□□□□□ -1.93
RAD4	YER162C	MRP49	P32388	137 aa		3.02	□□□□□ -1.93
RAD4	YER162C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
RAD4	YER162C	TOA2	P32774	122 aa		3.02	□□□□□ -1.93
RAD4	YER162C	SPT4	P32914	102 aa	Predicted RBP	3.02	□□□□□ -1.93
RAD4	YER162C	PTC1	P35182	281 aa		3.02	□□□□□ -1.93
RAD4	YER162C	YPC1	P38298	316 aa		3.02	□□□□□ -1.93
RAD4	YER162C	YPT31	P38555	223 aa	Known RBP	3.02	□□□□□ -1.93
RAD4	YER162C	STB1	P42845	420 aa		3.02	□□□□□ -1.93
RAD4	YER162C	YIP4	P53093	235 aa		3.02	□□□□□ -1.93
RAD4	YER162C	HCH1	P53834	153 aa		3.02	□□□□□ -1.93
RAD4	YER162C	RDL1	Q12305	139 aa	Known RBP	3.02	□□□□□ -1.93
RAD4	YER162C	UTP23	Q12339	254 aa	Known RBP	3.02	□□□□□ -1.93
RAD4	YER162C	YKL075C	P36083	450 aa		3.01	□□□□□ -1.93
RAD4	YER162C	MST28	P39552	234 aa		3.01	□□□□□ -1.93
RAD4	YER162C	GLR1	P41921	483 aa	Known RBP	3.01	□□□□□ -1.93
RAD4	YER162C	KEG1	P43614	200 aa		3.01	□□□□□ -1.93
RAD4	YER162C	YFR054C	P43622	192 aa		3.01	□□□□□ -1.93
RAD4	YER162C	BXI1	P48558	297 aa		3.01	□□□□□ -1.93
RAD4	YER162C	PRM8	P53174	237 aa		3.01	□□□□□ -1.93
RAD4	YER162C	AIM36	Q03798	255 aa		3.01	□□□□□ -1.93
RAD4	YER162C	GMC1	Q04399	608 aa		3.01	□□□□□ -1.93
RAD4	YER162C	YMR320W	Q04897	101 aa		3.01	□□□□□ -1.93
RAD4	YER162C	CNL1	Q06333	122 aa		3.01	□□□□□ -1.93
RAD4	YER162C	FRE8	Q12209	686 aa		3.01	□□□□□ -1.93
RAD4	YER162C	YDL085C-A	Q3E7B7	68 aa	Known RBP	3.01	□□□□□ -1.93
RAD4	YER162C	MHF1	Q3E835	90 aa		3.01	□□□□□ -1.93
RAD4	YER162C	SNC2	P33328	115 aa		3	□□□□□ -1.93
RAD4	YER162C	HIS7	P33734	552 aa	Known RBP	3	□□□□□ -1.93
RAD4	YER162C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
RAD4	YER162C	DOG2	P38773	246 aa		3	□□□□□ -1.93
RAD4	YER162C	DOG1	P38774	246 aa		3	□□□□□ -1.93
RAD4	YER162C	MDM31	P38880	579 aa		3	□□□□□ -1.93
RAD4	YER162C	PEX22	P39718	180 aa		3	□□□□□ -1.93
RAD4	YER162C	YPS5	P53057	165 aa		3	□□□□□ -1.93
RAD4	YER162C	TY1A-MR1	Q04215	440 aa		3	□□□□□ -1.93
RAD4	YER162C	RPL2A	P0CX45	254 aa	Known RBP	3	□□□□□ -1.93
RAD4	YER162C	RPL2B	P0CX46	254 aa	Known RBP	3	□□□□□ -1.93
RAD4	YER162C	MIR1	P23641	311 aa	Known RBP	3	□□□□□ -1.93
RAD4	YER162C	ATG22	P25568	528 aa		3	□□□□□ -1.93
RAD4	YER162C	SIP2	P34164	415 aa	Known RBP	3	□□□□□ -1.93
RAD4	YER162C	TOD6	P34219	525 aa		3	□□□□□ -1.93
RAD4	YER162C	URM1	P40554	99 aa	Predicted RBP	3	□□□□□ -1.93
RAD4	YER162C	WWM1	P43582	211 aa	Known RBP	3	□□□□□ -1.93
RAD4	YER162C	AIM25	P47140	327 aa		3	□□□□□ -1.93
RAD4	YER162C	MCM22	P47167	239 aa		3	□□□□□ -1.93
RAD4	YER162C	SYF2	P53277	215 aa	Predicted RBP	3	□□□□□ -1.93
RAD4	YER162C	HHT1	P61830	136 aa		3	□□□□□ -1.93
RAD4	YER162C	SPR6	Q01684	191 aa		3	□□□□□ -1.93
RAD4	YER162C	YLR346C	Q06139	101 aa		3	□□□□□ -1.93
RAD4	YER162C	TAZ1	Q06510	381 aa		3	□□□□□ -1.93
RAD4	YER162C	NIP7	Q08962	181 aa	Known RBP	3	□□□□□ -1.93
RAD4	YER162C	SEC17	P32602	292 aa		2.99	□□□□□ -1.93
RAD4	YER162C	RPF1	P38805	295 aa	Known RBP	2.99	□□□□□ -1.93
RAD4	YER162C	YNL208W	P40159	199 aa	Known RBP	2.99	□□□□□ -1.93
RAD4	YER162C	SMM1	P53720	384 aa	Known RBP	2.99	□□□□□ -1.93
RAD4	YER162C	YNL184C	P53876	108 aa		2.99	□□□□□ -1.93
RAD4	YER162C	PET191	Q02772	108 aa		2.99	□□□□□ -1.93
RAD4	YER162C	RCE1	Q03530	315 aa		2.99	□□□□□ -1.93
RAD4	YER162C	INP1	Q03694	420 aa		2.99	□□□□□ -1.93
RAD4	YER162C	FMP42	Q04991	504 aa		2.99	□□□□□ -1.93
RAD4	YER162C	ERP1	Q05359	219 aa	Known RBP	2.99	□□□□□ -1.93
RAD4	YER162C	MCH1	Q07376	486 aa		2.99	□□□□□ -1.93
RAD4	YER162C	GAT3	Q07928	141 aa		2.99	□□□□□ -1.93
RAD4	YER162C	OSW1	Q08692	278 aa		2.99	□□□□□ -1.93
RAD4	YER162C	YLR099W-A	Q3E798	87 aa		2.99	□□□□□ -1.93
RAD4	YER162C	CCA1	P21269	546 aa		2.99	□□□□□ -1.93
RAD4	YER162C	SRY1	P36007	326 aa		2.99	□□□□□ -1.93
RAD4	YER162C	YEA4	P40004	342 aa		2.99	□□□□□ -1.93
RAD4	YER162C	SMX2	P40204	77 aa	Known RBP	2.99	□□□□□ -1.93
RAD4	YER162C	GWT1	P47026	490 aa		2.99	□□□□□ -1.93
RAD4	YER162C	SIP18	P50263	79 aa		2.99	□□□□□ -1.93
RAD4	YER162C	HST4	P53688	370 aa		2.99	□□□□□ -1.93
RAD4	YER162C	SED1	Q01589	338 aa		2.99	□□□□□ -1.93
RAD4	YER162C	PIN3	Q06449	215 aa		2.99	□□□□□ -1.93
RAD4	YER162C	UBI4	P0CG63	381 aa	Known RBP	2.98	□□□□□ -1.93
RAD4	YER162C	RPS8A	P0CX39	200 aa	Known RBP	2.98	□□□□□ -1.93
RAD4	YER162C	RPS8B	P0CX40	200 aa	Known RBP	2.98	□□□□□ -1.93
RAD4	YER162C	PCL1	P24867	279 aa		2.98	□□□□□ -1.93
RAD4	YER162C	SAC1	P32368	623 aa	Known RBP	2.98	□□□□□ -1.93
RAD4	YER162C	TRS65	P32893	560 aa		2.98	□□□□□ -1.93
RAD4	YER162C	ECM31	P38122	312 aa		2.98	□□□□□ -1.93
RAD4	YER162C	YPT10	P38146	199 aa		2.98	□□□□□ -1.93
RAD4	YER162C	DFG10	P40526	253 aa		2.98	□□□□□ -1.93
RAD4	YER162C	OST2	P46964	130 aa		2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 95.5 ms