RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W SRL2Q12020 392 aa4.47□□□□□ -1.69
UBP9YER098W PET20Q99373 253 aa4.47□□□□□ -1.69
UBP9YER098W YPR170W-BP0C5R9 85 aa4.47□□□□□ -1.69
UBP9YER098W GLN3P18494 730 aa4.47□□□□□ -1.69
UBP9YER098W YPC1P38298 316 aa4.47□□□□□ -1.69
UBP9YER098W SMB1P40018 196 aaKnown RBP4.47□□□□□ -1.69
UBP9YER098W DIA1P54005 336 aa4.47□□□□□ -1.69
UBP9YER098W RCE1Q03530 315 aa4.47□□□□□ -1.69
UBP9YER098W MCH1Q07376 486 aa4.47□□□□□ -1.69
UBP9YER098W RAX2Q12465 1220 aa4.47□□□□□ -1.69
UBP9YER098W TDH3P00359 332 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
UBP9YER098W TRS65P32893 560 aa4.46□□□□□ -1.7
UBP9YER098W ECM15P35195 104 aa4.46□□□□□ -1.7
UBP9YER098W AME1P38313 324 aa4.46□□□□□ -1.7
UBP9YER098W TRS20P38334 175 aa4.46□□□□□ -1.7
UBP9YER098W HEM14P40012 539 aa4.46□□□□□ -1.7
UBP9YER098W AVT7P40501 490 aa4.46□□□□□ -1.7
UBP9YER098W CDC40P40968 455 aaPredicted RBP4.46□□□□□ -1.7
UBP9YER098W NIF3P53081 288 aa4.46□□□□□ -1.7
UBP9YER098W ADH6Q04894 360 aaKnown RBP4.46□□□□□ -1.7
UBP9YER098W YPR147CQ06522 304 aaKnown RBP4.46□□□□□ -1.7
UBP9YER098W YLR030WQ07967 263 aa4.46□□□□□ -1.7
UBP9YER098W COQ10Q08058 207 aa4.46□□□□□ -1.7
UBP9YER098W CSM4Q08955 156 aa4.46□□□□□ -1.7
UBP9YER098W IZH2Q12442 317 aa4.46□□□□□ -1.7
UBP9YER098W CPA1P07258 411 aaKnown RBP4.46□□□□□ -1.7
UBP9YER098W YAR066WP0CX18 203 aa4.46□□□□□ -1.7
UBP9YER098W YHR214WP0CX19 203 aa4.46□□□□□ -1.7
UBP9YER098W ARO2P28777 376 aaKnown RBP4.46□□□□□ -1.7
UBP9YER098W UTR5P32630 166 aa4.46□□□□□ -1.7
UBP9YER098W YPT53P36019 220 aa4.46□□□□□ -1.7
UBP9YER098W MRPL27P36526 146 aaPredicted RBP4.46□□□□□ -1.7
UBP9YER098W YEA6P39953 335 aa4.46□□□□□ -1.7
UBP9YER098W GIM5Q04493 163 aa4.46□□□□□ -1.7
UBP9YER098W PHS1P40857 217 aa4.45□□□□□ -1.7
UBP9YER098W CTF19Q02732 369 aa4.45□□□□□ -1.7
UBP9YER098W YML018CQ03730 393 aa4.45□□□□□ -1.7
UBP9YER098W COQ11Q05892 277 aa4.45□□□□□ -1.7
UBP9YER098W MRPL51Q06090 140 aaPredicted RBP4.45□□□□□ -1.7
UBP9YER098W MSW1P04803 379 aa4.44□□□□□ -1.7
UBP9YER098W POR1P04840 283 aaKnown RBP4.44□□□□□ -1.7
UBP9YER098W BET5Q03630 159 aa4.44□□□□□ -1.7
UBP9YER098W HNT1Q04344 158 aaKnown RBP4.44□□□□□ -1.7
UBP9YER098W YML096WQ04489 525 aa4.44□□□□□ -1.7
UBP9YER098W RTN1Q04947 295 aaKnown RBP4.44□□□□□ -1.7
UBP9YER098W TAZ1Q06510 381 aa4.44□□□□□ -1.7
UBP9YER098W SFH5P47008 294 aa4.44□□□□□ -1.7
UBP9YER098W SCS3P53012 380 aa4.44□□□□□ -1.7
UBP9YER098W TDA7P53882 636 aaPredicted RBP4.44□□□□□ -1.7
UBP9YER098W YNL134CP53912 376 aaKnown RBP4.44□□□□□ -1.7
UBP9YER098W TPT1Q12272 230 aaKnown RBP4.44□□□□□ -1.7
UBP9YER098W COX9P07255 59 aa4.43□□□□□ -1.7
UBP9YER098W RPL42AP0CX27 106 aaKnown RBP4.43□□□□□ -1.7
UBP9YER098W RPL42BP0CX28 106 aaKnown RBP4.43□□□□□ -1.7
UBP9YER098W RPB5P20434 215 aa4.43□□□□□ -1.7
UBP9YER098W MXR2P25566 168 aa4.43□□□□□ -1.7
UBP9YER098W FMT1P32785 401 aa4.43□□□□□ -1.7
UBP9YER098W TKL2P33315 681 aa4.43□□□□□ -1.7
UBP9YER098W SIM1P40472 476 aa4.43□□□□□ -1.7
UBP9YER098W SNO3P43544 222 aa4.43□□□□□ -1.7
UBP9YER098W GPI14P47088 403 aaKnown RBP4.43□□□□□ -1.7
UBP9YER098W ALG9P53868 555 aaKnown RBP4.43□□□□□ -1.7
UBP9YER098W HHT1P61830 136 aa4.43□□□□□ -1.7
UBP9YER098W YDR391CQ04170 232 aa4.43□□□□□ -1.7
UBP9YER098W FSH2Q05015 223 aa4.43□□□□□ -1.7
UBP9YER098W PAU23Q07987 124 aa4.43□□□□□ -1.7
UBP9YER098W YDL157CQ12082 118 aa4.43□□□□□ -1.7
UBP9YER098W YDL009CQ12210 107 aa4.43□□□□□ -1.7
UBP9YER098W PRR2Q12310 699 aa4.43□□□□□ -1.7
UBP9YER098W SME1Q12330 94 aaPredicted RBP4.43□□□□□ -1.7
UBP9YER098W PAU17Q12370 124 aa4.43□□□□□ -1.7
UBP9YER098W NHP6AP11632 93 aaKnown RBP4.43□□□□□ -1.7
UBP9YER098W TOA2P32774 122 aa4.43□□□□□ -1.7
UBP9YER098W ECM34P38728 170 aa4.43□□□□□ -1.7
UBP9YER098W YPT35P38815 214 aaKnown RBP4.43□□□□□ -1.7
UBP9YER098W TIM17P39515 158 aa4.43□□□□□ -1.7
UBP9YER098W BXI1P48558 297 aa4.43□□□□□ -1.7
UBP9YER098W YDR248CQ03786 193 aa4.43□□□□□ -1.7
UBP9YER098W HRI1Q05905 244 aaKnown RBP4.43□□□□□ -1.7
UBP9YER098W SEI1Q06058 285 aa4.43□□□□□ -1.7
UBP9YER098W YLR050CQ12155 161 aaKnown RBP4.43□□□□□ -1.7
UBP9YER098W MIX23P38162 196 aa4.42□□□□□ -1.7
UBP9YER098W SDS24P38314 527 aa4.42□□□□□ -1.7
UBP9YER098W YEA4P40004 342 aa4.42□□□□□ -1.7
UBP9YER098W BTT1P40314 149 aaPredicted RBP4.42□□□□□ -1.7
UBP9YER098W YNR048WP53740 393 aa4.42□□□□□ -1.7
UBP9YER098W SYM1Q06563 197 aa4.42□□□□□ -1.7
UBP9YER098W YOL024WQ08172 172 aa4.42□□□□□ -1.7
UBP9YER098W HUT1Q12520 339 aa4.42□□□□□ -1.7
UBP9YER098W DOG1P38774 246 aa4.42□□□□□ -1.7
UBP9YER098W HSP10P38910 106 aa4.42□□□□□ -1.7
UBP9YER098W HIT1P46973 164 aa4.42□□□□□ -1.7
UBP9YER098W EMC4P53073 190 aa4.42□□□□□ -1.7
UBP9YER098W CNL1Q06333 122 aa4.42□□□□□ -1.7
UBP9YER098W FSF1Q12029 327 aaKnown RBP4.42□□□□□ -1.7
UBP9YER098W SCS22Q6Q595 175 aa4.42□□□□□ -1.7
UBP9YER098W DPM1P14020 267 aaKnown RBP4.41□□□□□ -1.7
UBP9YER098W YGL010WP25338 174 aa4.41□□□□□ -1.7
UBP9YER098W MRPS5P33759 307 aa4.41□□□□□ -1.7
UBP9YER098W YKL187CP34231 750 aa4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 76.5 ms