RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C SPS18P32572 300 aa4.76□□□□□ -1.65
SEC20YDR498C CPR5P35176 225 aa4.76□□□□□ -1.65
SEC20YDR498C NNK1P36003 928 aa4.76□□□□□ -1.65
SEC20YDR498C PIR5P46999 287 aa4.76□□□□□ -1.65
SEC20YDR498C YGR050CP53231 118 aa4.76□□□□□ -1.65
SEC20YDR498C SUR7P54003 302 aa4.76□□□□□ -1.65
SEC20YDR498C POC4Q12245 148 aaPredicted RBP4.76□□□□□ -1.65
SEC20YDR498C DGK1Q12382 290 aa4.76□□□□□ -1.65
SEC20YDR498C YDR157WA0A023PZE8 133 aa4.75□□□□□ -1.65
SEC20YDR498C RPS23AP0CX29 145 aaKnown RBP4.75□□□□□ -1.65
SEC20YDR498C RPS23BP0CX30 145 aa4.75□□□□□ -1.65
SEC20YDR498C SPS100P13130 326 aa4.75□□□□□ -1.65
SEC20YDR498C CDC50P25656 391 aa4.75□□□□□ -1.65
SEC20YDR498C MTR2P34232 184 aaKnown RBP4.75□□□□□ -1.65
SEC20YDR498C UPS2P35200 230 aa4.75□□□□□ -1.65
SEC20YDR498C HAM1P47119 197 aaKnown RBP4.75□□□□□ -1.65
SEC20YDR498C HHO1P53551 258 aa4.75□□□□□ -1.65
SEC20YDR498C SMM1P53720 384 aaKnown RBP4.75□□□□□ -1.65
SEC20YDR498C RPL21AQ02753 160 aaKnown RBP4.75□□□□□ -1.65
SEC20YDR498C TMA23Q03525 211 aa4.75□□□□□ -1.65
SEC20YDR498C YMR090WQ04304 227 aaKnown RBP4.75□□□□□ -1.65
SEC20YDR498C ECM18Q04623 453 aa4.75□□□□□ -1.65
SEC20YDR498C FSH2Q05015 223 aa4.75□□□□□ -1.65
SEC20YDR498C YFH1Q07540 174 aa4.75□□□□□ -1.65
SEC20YDR498C RPL21BQ12672 160 aaKnown RBP4.75□□□□□ -1.65
SEC20YDR498C HEM13P11353 328 aaKnown RBP4.74□□□□□ -1.65
SEC20YDR498C RPL14AP36105 138 aaKnown RBP4.74□□□□□ -1.65
SEC20YDR498C PRS3P38689 320 aaKnown RBP4.74□□□□□ -1.65
SEC20YDR498C RPL14BP38754 138 aaKnown RBP4.74□□□□□ -1.65
SEC20YDR498C ECM14P38836 430 aa4.74□□□□□ -1.65
SEC20YDR498C COX15P40086 486 aa4.74□□□□□ -1.65
SEC20YDR498C BNS1P50084 137 aa4.74□□□□□ -1.65
SEC20YDR498C YPL067CQ02754 198 aa4.74□□□□□ -1.65
SEC20YDR498C MRP2P10663 115 aaPredicted RBP4.73□□□□□ -1.65
SEC20YDR498C URA5P13298 226 aaKnown RBP4.73□□□□□ -1.65
SEC20YDR498C YMR31P19955 123 aa4.73□□□□□ -1.65
SEC20YDR498C SPO13P23624 291 aa4.73□□□□□ -1.65
SEC20YDR498C NTF2P33331 125 aaKnown RBP4.73□□□□□ -1.65
SEC20YDR498C YKL187CP34231 750 aa4.73□□□□□ -1.65
SEC20YDR498C YJL118WP47022 219 aa4.73□□□□□ -1.65
SEC20YDR498C BNA2P47125 453 aa4.73□□□□□ -1.65
SEC20YDR498C PDR17P53844 350 aa4.73□□□□□ -1.65
SEC20YDR498C LIP2Q06005 328 aa4.73□□□□□ -1.65
SEC20YDR498C PAM18Q07914 168 aa4.73□□□□□ -1.65
SEC20YDR498C HRD1Q08109 551 aa4.73□□□□□ -1.65
SEC20YDR498C YOL029CQ08187 201 aa4.73□□□□□ -1.65
SEC20YDR498C COX17Q12287 69 aa4.73□□□□□ -1.65
SEC20YDR498C AGC1Q12482 902 aa4.73□□□□□ -1.65
SEC20YDR498C LSB5P25369 354 aa4.72□□□□□ -1.65
SEC20YDR498C DAL3P32459 195 aa4.72□□□□□ -1.65
SEC20YDR498C ATG8P38182 117 aaRIP-Chip data4.72□□□□□ -1.65not detected
SEC20YDR498C PSD1P39006 500 aa4.72□□□□□ -1.65
SEC20YDR498C NSE4P43124 402 aa4.72□□□□□ -1.65
SEC20YDR498C DAN1P47178 298 aa4.72□□□□□ -1.65
SEC20YDR498C YGR026WP53217 278 aa4.72□□□□□ -1.65
SEC20YDR498C YNR066CP53752 436 aa4.72□□□□□ -1.65
SEC20YDR498C DYN2Q02647 92 aa4.72□□□□□ -1.65
SEC20YDR498C YMR007WQ03675 126 aa4.72□□□□□ -1.65
SEC20YDR498C AVO2Q04749 426 aa4.72□□□□□ -1.65
SEC20YDR498C ARR3Q06598 404 aa4.72□□□□□ -1.65
SEC20YDR498C ERV2Q12284 196 aa4.72□□□□□ -1.65
SEC20YDR498C POM34Q12445 299 aa4.72□□□□□ -1.65
SEC20YDR498C VPS63O13549 108 aa4.71□□□□□ -1.66
SEC20YDR498C MRS3P10566 314 aa4.71□□□□□ -1.66
SEC20YDR498C FCY2P17064 533 aa4.71□□□□□ -1.66
SEC20YDR498C ECM25P32525 599 aa4.71□□□□□ -1.66
SEC20YDR498C YBL059WP34224 193 aa4.71□□□□□ -1.66
SEC20YDR498C YKR045CP36138 183 aa4.71□□□□□ -1.66
SEC20YDR498C YBR013CP38215 129 aa4.71□□□□□ -1.66
SEC20YDR498C PEX7P39108 375 aa4.71□□□□□ -1.66
SEC20YDR498C GAT2P40209 560 aa4.71□□□□□ -1.66
SEC20YDR498C POG1P40473 351 aa4.71□□□□□ -1.66
SEC20YDR498C VMA21P41806 77 aa4.71□□□□□ -1.66
SEC20YDR498C ERG25P53045 309 aa4.71□□□□□ -1.66
SEC20YDR498C YNL046WP53956 172 aa4.71□□□□□ -1.66
SEC20YDR498C YHP1Q04116 353 aa4.71□□□□□ -1.66
SEC20YDR498C DCS1Q06151 350 aa4.71□□□□□ -1.66
SEC20YDR498C FRQ1Q06389 190 aa4.71□□□□□ -1.66
SEC20YDR498C YCL048W-AQ2V2Q2 79 aa4.71□□□□□ -1.66
SEC20YDR498C YOS1Q3E834 85 aa4.71□□□□□ -1.66
SEC20YDR498C RPL9AP05738 191 aaKnown RBP4.7□□□□□ -1.66
SEC20YDR498C SPC29P33419 253 aa4.7□□□□□ -1.66
SEC20YDR498C SDH4P37298 181 aa4.7□□□□□ -1.66
SEC20YDR498C YBR292CP38357 123 aa4.7□□□□□ -1.66
SEC20YDR498C WSS1P38838 269 aa4.7□□□□□ -1.66
SEC20YDR498C PHS1P40857 217 aa4.7□□□□□ -1.66
SEC20YDR498C YJL213WP40896 331 aa4.7□□□□□ -1.66
SEC20YDR498C TTI2P47168 421 aa4.7□□□□□ -1.66
SEC20YDR498C YNL234WP53857 426 aa4.7□□□□□ -1.66
SEC20YDR498C LPP1Q04396 274 aa4.7□□□□□ -1.66
SEC20YDR498C CTR3Q06686 241 aa4.7□□□□□ -1.66
SEC20YDR498C SOD1P00445 154 aaKnown RBP4.69□□□□□ -1.66
SEC20YDR498C RPS25BP0C0T4 108 aaKnown RBP4.69□□□□□ -1.66
SEC20YDR498C RPB3P16370 318 aaKnown RBP4.69□□□□□ -1.66
SEC20YDR498C ATP10P18496 279 aa4.69□□□□□ -1.66
SEC20YDR498C SHB17P36136 271 aaKnown RBP4.69□□□□□ -1.66
SEC20YDR498C ATP3P38077 311 aaKnown RBP4.69□□□□□ -1.66
SEC20YDR498C ADH5P38113 351 aaKnown RBP4.69□□□□□ -1.66
SEC20YDR498C RIB5P38145 238 aa4.69□□□□□ -1.66
SEC20YDR498C SHG1P38337 142 aa4.69□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms