RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W DGK1Q12382 290 aa1.69□□□□□ -2.14
SDC1YDR469W RPO41P13433 1351 aaKnown RBP1.69□□□□□ -2.14
SDC1YDR469W RAD50P12753 1312 aa1.68□□□□□ -2.14
SDC1YDR469W TIM9O74700 87 aa1.68□□□□□ -2.14
SDC1YDR469W CBP6P07253 162 aaPredicted RBP1.68□□□□□ -2.14
SDC1YDR469W NSP1P14907 823 aaKnown RBP1.68□□□□□ -2.14
SDC1YDR469W ATP15P21306 62 aa1.68□□□□□ -2.14
SDC1YDR469W SUA7P29055 345 aaPredicted RBP1.68□□□□□ -2.14
SDC1YDR469W OPY1P38271 328 aa1.68□□□□□ -2.14
SDC1YDR469W NSG1P38837 291 aa1.68□□□□□ -2.14
SDC1YDR469W ARC15P40518 154 aaRIP-Chip data1.68□□□□□ -2.14not detected
SDC1YDR469W YFL012WP43580 148 aa1.68□□□□□ -2.14
SDC1YDR469W SKI6P46948 246 aaPredicted RBP1.68□□□□□ -2.14
SDC1YDR469W DSK2P48510 373 aa1.68□□□□□ -2.14
SDC1YDR469W RBL2P48606 106 aaKnown RBP1.68□□□□□ -2.14
SDC1YDR469W SBH1P52870 82 aa1.68□□□□□ -2.14
SDC1YDR469W YGL088WP53151 121 aa1.68□□□□□ -2.14
SDC1YDR469W RCF2P53721 224 aa1.68□□□□□ -2.14
SDC1YDR469W YDR274CP87283 123 aa1.68□□□□□ -2.14
SDC1YDR469W HAL1Q01766 294 aa1.68□□□□□ -2.14
SDC1YDR469W YMR099CQ03161 297 aaKnown RBP1.68□□□□□ -2.14
SDC1YDR469W TSA2Q04120 196 aa1.68□□□□□ -2.14
SDC1YDR469W FCF1Q05498 189 aaPredicted RBP1.68□□□□□ -2.14
SDC1YDR469W FYV12Q08559 129 aa1.68□□□□□ -2.14
SDC1YDR469W YDL180WQ12301 547 aa1.68□□□□□ -2.14
SDC1YDR469W PSF1Q12488 208 aa1.68□□□□□ -2.14
SDC1YDR469W DUR1,2P32528 1835 aaKnown RBP1.68□□□□□ -2.14
SDC1YDR469W REP2P03872 296 aa1.67□□□□□ -2.14
SDC1YDR469W RPL9AP05738 191 aaKnown RBP1.67□□□□□ -2.14
SDC1YDR469W STP22P25604 385 aa1.67□□□□□ -2.14
SDC1YDR469W CPR5P35176 225 aa1.67□□□□□ -2.14
SDC1YDR469W YKR032WP36127 104 aa1.67□□□□□ -2.14
SDC1YDR469W YER188WP40103 239 aa1.67□□□□□ -2.14
SDC1YDR469W YPL073CP40323 161 aa1.67□□□□□ -2.14
SDC1YDR469W YFL019CP43576 117 aa1.67□□□□□ -2.14
SDC1YDR469W YFR054CP43622 192 aa1.67□□□□□ -2.14
SDC1YDR469W TDA4P47153 279 aa1.67□□□□□ -2.14
SDC1YDR469W TTI2P47168 421 aa1.67□□□□□ -2.14
SDC1YDR469W RPL9BP51401 191 aaKnown RBP1.67□□□□□ -2.14
SDC1YDR469W AIF1P52923 378 aa1.67□□□□□ -2.14
SDC1YDR469W YGL193CP53097 103 aa1.67□□□□□ -2.14
SDC1YDR469W FMN1Q03778 218 aa1.67□□□□□ -2.14
SDC1YDR469W CSN9Q03981 162 aa1.67□□□□□ -2.14
SDC1YDR469W SPG3Q04398 127 aaPredicted RBP1.67□□□□□ -2.14
SDC1YDR469W YMR320WQ04897 101 aa1.67□□□□□ -2.14
SDC1YDR469W SLO1Q3E784 85 aa1.67□□□□□ -2.14
SDC1YDR469W SAS5Q99314 248 aa1.67□□□□□ -2.14
SDC1YDR469W MDS3P53094 1487 aa1.67□□□□□ -2.14
SDC1YDR469W TKL2P33315 681 aa1.66□□□□□ -2.14
SDC1YDR469W PAN3P36102 679 aaPredicted RBP1.66□□□□□ -2.14
SDC1YDR469W VTC1P40046 129 aaRIP-Chip data1.66□□□□□ -2.14not detected
SDC1YDR469W DLS1P40366 167 aa1.66□□□□□ -2.14
SDC1YDR469W YFR045WP43617 309 aa1.66□□□□□ -2.14
SDC1YDR469W EAF6P47128 113 aa1.66□□□□□ -2.14
SDC1YDR469W VMA10P48836 114 aaKnown RBP1.66□□□□□ -2.14
SDC1YDR469W TIM13P53299 105 aa1.66□□□□□ -2.14
SDC1YDR469W YGR219WP53307 113 aa1.66□□□□□ -2.14
SDC1YDR469W CAB4P53332 305 aa1.66□□□□□ -2.14
SDC1YDR469W HHO1P53551 258 aa1.66□□□□□ -2.14
SDC1YDR469W DIG2Q03373 323 aaKnown RBP1.66□□□□□ -2.14
SDC1YDR469W HIS3P06633 220 aa1.65□□□□□ -2.15
SDC1YDR469W ATP5P09457 212 aa1.65□□□□□ -2.15
SDC1YDR469W TIR1P10863 254 aa1.65□□□□□ -2.15
SDC1YDR469W HSP26P15992 214 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
SDC1YDR469W SPT14P32363 452 aa1.65□□□□□ -2.15
SDC1YDR469W PTC1P35182 281 aa1.65□□□□□ -2.15
SDC1YDR469W MRPL17P36528 281 aa1.65□□□□□ -2.15
SDC1YDR469W YER134CP40081 178 aa1.65□□□□□ -2.15
SDC1YDR469W GVP36P40531 326 aaKnown RBP1.65□□□□□ -2.15
SDC1YDR469W GLR1P41921 483 aaKnown RBP1.65□□□□□ -2.15
SDC1YDR469W ERJ5P43613 295 aaPredicted RBP1.65□□□□□ -2.15
SDC1YDR469W FIP1P45976 327 aa1.65□□□□□ -2.15
SDC1YDR469W CCC1P47818 322 aa1.65□□□□□ -2.15
SDC1YDR469W TIM8P57744 87 aa1.65□□□□□ -2.15
SDC1YDR469W VPS71Q03433 280 aa1.65□□□□□ -2.15
SDC1YDR469W NAT3Q06504 195 aa1.65□□□□□ -2.15
SDC1YDR469W HRD1Q08109 551 aa1.65□□□□□ -2.15
SDC1YDR469W AKR2Q12013 749 aa1.65□□□□□ -2.15
SDC1YDR469W Q0144Q9ZZW2 109 aa1.65□□□□□ -2.15
SDC1YDR469W YAR023CD6VPM8 179 aa1.64□□□□□ -2.15
SDC1YDR469W MSW1P04803 379 aa1.64□□□□□ -2.15
SDC1YDR469W CPA1P07258 411 aaKnown RBP1.64□□□□□ -2.15
SDC1YDR469W MID2P36027 376 aa1.64□□□□□ -2.15
SDC1YDR469W RPS20P38701 121 aaKnown RBP1.64□□□□□ -2.15
SDC1YDR469W CTR2P38865 189 aa1.64□□□□□ -2.15
SDC1YDR469W YJL218WP40892 196 aaKnown RBP1.64□□□□□ -2.15
SDC1YDR469W GLC8P41818 229 aa1.64□□□□□ -2.15
SDC1YDR469W SMD3P43321 101 aaKnown RBP1.64□□□□□ -2.15
SDC1YDR469W PIR5P46999 287 aa1.64□□□□□ -2.15
SDC1YDR469W XPT1P47165 209 aa1.64□□□□□ -2.15
SDC1YDR469W YGR026WP53217 278 aa1.64□□□□□ -2.15
SDC1YDR469W VPS28Q02767 242 aa1.64□□□□□ -2.15
SDC1YDR469W COF1Q03048 143 aaKnown RBP1.64□□□□□ -2.15
SDC1YDR469W GAL83Q04739 417 aa1.64□□□□□ -2.15
SDC1YDR469W YOR268CQ08734 132 aa1.64□□□□□ -2.15
SDC1YDR469W YPR063CQ12160 140 aa1.64□□□□□ -2.15
SDC1YDR469W FCY1Q12178 158 aa1.64□□□□□ -2.15
SDC1YDR469W UBR1P19812 1950 aa1.64□□□□□ -2.15
SDC1YDR469W POR1P04840 283 aaKnown RBP1.63□□□□□ -2.15
SDC1YDR469W RSA4P25382 515 aaKnown RBP1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 128.1 ms