RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C CUE4Q04201 117 aaPredicted RBP1.94□□□□□ -2.1
SSD1YDR293C YMR082CQ04276 118 aa1.94□□□□□ -2.1
SSD1YDR293C DCS1Q06151 350 aa1.94□□□□□ -2.1
SSD1YDR293C DXO1Q06349 442 aa1.94□□□□□ -2.1
SSD1YDR293C YOL073CQ08232 322 aa1.94□□□□□ -2.1
SSD1YDR293C YOR186WQ08560 144 aa1.94□□□□□ -2.1
SSD1YDR293C FRE7Q12333 620 aa1.94□□□□□ -2.1
SSD1YDR293C YBR298C-AQ8TGK4 73 aa1.94□□□□□ -2.1
SSD1YDR293C YER175W-AQ8TGU4 54 aa1.94□□□□□ -2.1
SSD1YDR293C HTB2P02294 131 aa1.94□□□□□ -2.1
SSD1YDR293C OCH1P31755 480 aa1.94□□□□□ -2.1
SSD1YDR293C RNP1P32385 249 aa1.94□□□□□ -2.1
SSD1YDR293C PMU1P36069 295 aa1.94□□□□□ -2.1
SSD1YDR293C YJR056CP47115 236 aa1.94□□□□□ -2.1
SSD1YDR293C RPN14P53196 417 aa1.94□□□□□ -2.1
SSD1YDR293C BOR1P53838 576 aa1.94□□□□□ -2.1
SSD1YDR293C LPP1Q04396 274 aa1.94□□□□□ -2.1
SSD1YDR293C GMC1Q04399 608 aa1.94□□□□□ -2.1
SSD1YDR293C CTR3Q06686 241 aa1.94□□□□□ -2.1
SSD1YDR293C NPC2Q12408 173 aa1.94□□□□□ -2.1
SSD1YDR293C HTL1Q9URQ5 78 aa1.94□□□□□ -2.1
SSD1YDR293C ATP5P09457 212 aa1.93□□□□□ -2.1
SSD1YDR293C SUA7P29055 345 aaPredicted RBP1.93□□□□□ -2.1
SSD1YDR293C RAD23P32628 398 aaKnown RBP1.93□□□□□ -2.1
SSD1YDR293C WSC4P38739 605 aa1.93□□□□□ -2.1
SSD1YDR293C AZF1P41696 914 aa1.93□□□□□ -2.1
SSD1YDR293C EGT2P42835 1041 aa1.93□□□□□ -2.1
SSD1YDR293C SPG5P42933 373 aa1.93□□□□□ -2.1
SSD1YDR293C MCM22P47167 239 aa1.93□□□□□ -2.1
SSD1YDR293C MSY1P48527 492 aa1.93□□□□□ -2.1
SSD1YDR293C MSO1P53604 210 aaKnown RBP1.93□□□□□ -2.1
SSD1YDR293C SDC1Q03323 175 aa1.93□□□□□ -2.1
SSD1YDR293C CYC3P06182 269 aa1.93□□□□□ -2.1
SSD1YDR293C KIN28P06242 306 aa1.93□□□□□ -2.1
SSD1YDR293C MRPL44P19956 98 aa1.93□□□□□ -2.1
SSD1YDR293C DAL82P21705 255 aa1.93□□□□□ -2.1
SSD1YDR293C ERG4P25340 473 aa1.93□□□□□ -2.1
SSD1YDR293C EMP70P32802 667 aa1.93□□□□□ -2.1
SSD1YDR293C PRY2P36110 329 aa1.93□□□□□ -2.1
SSD1YDR293C ATG8P38182 117 aaRIP-Chip data1.93□□□□□ -2.1not detected
SSD1YDR293C YMR262WP38430 313 aa1.93□□□□□ -2.1
SSD1YDR293C FYV4P38783 130 aaPredicted RBP1.93□□□□□ -2.1
SSD1YDR293C YGL114WP53134 725 aa1.93□□□□□ -2.1
SSD1YDR293C OCA2P53949 197 aa1.93□□□□□ -2.1
SSD1YDR293C PAA1Q12447 191 aaKnown RBP1.93□□□□□ -2.1
SSD1YDR293C YDL085C-AQ3E7B7 68 aaKnown RBP1.93□□□□□ -2.1
SSD1YDR293C MTC7P32633 139 aa1.93□□□□□ -2.1
SSD1YDR293C YKL102CP34249 101 aa1.93□□□□□ -2.1
SSD1YDR293C YHL044WP38727 235 aa1.93□□□□□ -2.1
SSD1YDR293C YIL060WP40519 144 aa1.93□□□□□ -2.1
SSD1YDR293C UBC13P52490 153 aa1.93□□□□□ -2.1
SSD1YDR293C YIP1P53039 248 aa1.93□□□□□ -2.1
SSD1YDR293C FHN1P53279 174 aa1.93□□□□□ -2.1
SSD1YDR293C YNL046WP53956 172 aa1.93□□□□□ -2.1
SSD1YDR293C TIM11P81449 96 aaPredicted RBP1.93□□□□□ -2.1
SSD1YDR293C ARL3Q02804 198 aa1.93□□□□□ -2.1
SSD1YDR293C UPS3Q04006 179 aa1.93□□□□□ -2.1
SSD1YDR293C HRT1Q08273 121 aa1.93□□□□□ -2.1
SSD1YDR293C YOR376WQ08900 122 aa1.93□□□□□ -2.1
SSD1YDR293C YLR050CQ12155 161 aaKnown RBP1.93□□□□□ -2.1
SSD1YDR293C TIR1P10863 254 aa1.92□□□□□ -2.1
SSD1YDR293C SEC22P22214 214 aa1.92□□□□□ -2.1
SSD1YDR293C HSP12P22943 109 aaKnown RBP1.92□□□□□ -2.1
SSD1YDR293C CUE1P38428 203 aa1.92□□□□□ -2.1
SSD1YDR293C YAR068WP39564 161 aa1.92□□□□□ -2.1
SSD1YDR293C SHO1P40073 367 aa1.92□□□□□ -2.1
SSD1YDR293C YIL152WP40455 235 aa1.92□□□□□ -2.1
SSD1YDR293C NSE4P43124 402 aa1.92□□□□□ -2.1
SSD1YDR293C ECO1P43605 281 aa1.92□□□□□ -2.1
SSD1YDR293C YJR012CP47087 207 aa1.92□□□□□ -2.1
SSD1YDR293C ERV14P53173 138 aa1.92□□□□□ -2.1
SSD1YDR293C MRX11Q03079 207 aa1.92□□□□□ -2.1
SSD1YDR293C SWT1Q12104 458 aa1.92□□□□□ -2.1
SSD1YDR293C YRA1Q12159 226 aaKnown RBP1.92□□□□□ -2.1
SSD1YDR293C DCN1Q12395 269 aa1.92□□□□□ -2.1
SSD1YDR293C BOL1Q3E793 110 aa1.92□□□□□ -2.1
SSD1YDR293C Q0144Q9ZZW2 109 aa1.92□□□□□ -2.1
SSD1YDR293C TPI1P00942 248 aaKnown RBP1.92□□□□□ -2.1
SSD1YDR293C RPL1AP0CX43 217 aaKnown RBP1.92□□□□□ -2.1
SSD1YDR293C RPL1BP0CX44 217 aaKnown RBP1.92□□□□□ -2.1
SSD1YDR293C RPL12AP0CX53 165 aaKnown RBP1.92□□□□□ -2.1
SSD1YDR293C RPL12BP0CX54 165 aa1.92□□□□□ -2.1
SSD1YDR293C RPB8P20436 146 aa1.92□□□□□ -2.1
SSD1YDR293C ARO4P32449 370 aaKnown RBP1.92□□□□□ -2.1
SSD1YDR293C RPB7P34087 171 aa1.92□□□□□ -2.1
SSD1YDR293C YKL187CP34231 750 aa1.92□□□□□ -2.1
SSD1YDR293C SDH4P37298 181 aa1.92□□□□□ -2.1
SSD1YDR293C PRS4P38063 326 aaPredicted RBP1.92□□□□□ -2.1
SSD1YDR293C HIT1P46973 164 aa1.92□□□□□ -2.1
SSD1YDR293C RPL9BP51401 191 aaKnown RBP1.92□□□□□ -2.1
SSD1YDR293C YGL117WP53133 265 aa1.92□□□□□ -2.1
SSD1YDR293C ATP19P81451 68 aa1.92□□□□□ -2.1
SSD1YDR293C PRP46Q12417 451 aaPredicted RBP1.92□□□□□ -2.1
SSD1YDR293C RPS23AP0CX29 145 aaKnown RBP1.92□□□□□ -2.1
SSD1YDR293C RPS23BP0CX30 145 aa1.92□□□□□ -2.1
SSD1YDR293C TOM40P23644 387 aaKnown RBP1.92□□□□□ -2.1
SSD1YDR293C HMX1P32339 317 aa1.92□□□□□ -2.1
SSD1YDR293C UPS2P35200 230 aa1.92□□□□□ -2.1
SSD1YDR293C SNO3P43544 222 aa1.92□□□□□ -2.1
SSD1YDR293C YDL183CP48569 320 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 72.2 ms