RNA–Protein interactions for RNA: YDL196W

YDL196W, Transcript of Dubious open reading frame, yeast

Gene YDL196W, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL196W	YDL196W	YCL012C	Q8J0M4	134 aa		0.59	□□□□□ -2.31
YDL196W	YDL196W	POR1	P04840	283 aa	Known RBP	0.58	□□□□□ -2.32
YDL196W	YDL196W	YOL162W	P0CF19	215 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	YGL010W	P25338	174 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	ADE1	P27616	306 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	OCH1	P31755	480 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	PAN3	P36102	679 aa	Predicted RBP	0.58	□□□□□ -2.32
YDL196W	YDL196W	TVP38	P36164	337 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	OPY1	P38271	328 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	YEA4	P40004	342 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	FCY21	P40039	528 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	LSM4	P40070	187 aa	Known RBP	0.58	□□□□□ -2.32
YDL196W	YDL196W	POG1	P40473	351 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	CUP9	P41817	306 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	XPT1	P47165	209 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	KNH1	P50112	268 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	ARO8	P53090	500 aa	Known RBP	0.58	□□□□□ -2.32
YDL196W	YDL196W	TIM13	P53299	105 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	YNR077C	P53758	84 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	POP3	P53833	195 aa	Predicted RBP	0.58	□□□□□ -2.32
YDL196W	YDL196W	YNL247W	P53852	767 aa	Known RBP	0.58	□□□□□ -2.32
YDL196W	YDL196W	PGA1	P53896	198 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	HPT1	Q04178	221 aa	Known RBP	0.58	□□□□□ -2.32
YDL196W	YDL196W	GRX8	Q05926	109 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	SHH4	Q06236	168 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	BRX1	Q08235	291 aa	Known RBP	0.58	□□□□□ -2.32
YDL196W	YDL196W	RAD28	Q12021	506 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	MPD1	Q12404	318 aa	Known RBP	0.58	□□□□□ -2.32
YDL196W	YDL196W	YLR412C-A	Q3E742	68 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	CMC2	Q3E7A4	109 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	YML100W-A	Q8TGT0	57 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	FAS1	P07149	2051 aa	Known RBP	0.58	□□□□□ -2.32
YDL196W	YDL196W	FLO9	P39712	1322 aa		0.58	□□□□□ -2.32
YDL196W	YDL196W	CHD1	P32657	1468 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	YAR023C	D6VPM8	179 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	CMD1	P06787	147 aa	Known RBP	0.57	□□□□□ -2.32
YDL196W	YDL196W	GPA2	P10823	449 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.57	□□□□□ -2.32	not detected
YDL196W	YDL196W	NSP1	P14907	823 aa	Known RBP	0.57	□□□□□ -2.32
YDL196W	YDL196W	SEC11	P15367	167 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	AHC2	P25649	128 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	SFK1	P35735	353 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	YBR219C	P38317	127 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	YBR220C	P38318	560 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	NSG1	P38837	291 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	SRP14	P38985	146 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	YER034W	P40022	185 aa	Known RBP	0.57	□□□□□ -2.32
YDL196W	YDL196W	YER135C	P40082	130 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	RPL13B	P40212	199 aa	Known RBP	0.57	□□□□□ -2.32
YDL196W	YDL196W	UBC12	P52491	188 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	SNO1	Q03144	224 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	TLG1	Q03322	224 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	MZM1	Q03429	123 aa	Predicted RBP	0.57	□□□□□ -2.32
YDL196W	YDL196W	VPS71	Q03433	280 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	RCE1	Q03530	315 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	ARO80	Q04052	950 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	GIM5	Q04493	163 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	YOL014W	Q08110	124 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	YLR050C	Q12155	161 aa	Known RBP	0.57	□□□□□ -2.32
YDL196W	YDL196W	YOR342C	Q12182	319 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	PEX11	Q12462	236 aa		0.57	□□□□□ -2.32
YDL196W	YDL196W	RPL13A	Q12690	199 aa	Predicted RBP	0.57	□□□□□ -2.32
YDL196W	YDL196W	QCR2	P07257	368 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	QCR8	P08525	94 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	FPR1	P20081	114 aa	Known RBP	0.56	□□□□□ -2.32
YDL196W	YDL196W	IDP1	P21954	428 aa	Known RBP	0.56	□□□□□ -2.32
YDL196W	YDL196W	APA2	P22108	325 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	SPO13	P23624	291 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	RAD51	P25454	400 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	ARO7	P32178	256 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	GSP2	P32836	220 aa	Known RBP	0.56	□□□□□ -2.32
YDL196W	YDL196W	UBC6	P33296	250 aa	Predicted RBP	0.56	□□□□□ -2.32
YDL196W	YDL196W	YKL102C	P34249	101 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	YKR045C	P36138	183 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	MAK5	P38112	773 aa	Predicted RBP	0.56	□□□□□ -2.32
YDL196W	YDL196W	NVJ1	P38881	321 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	EDC3	P39998	551 aa	Known RBP	0.56	□□□□□ -2.32
YDL196W	YDL196W	NSA2	P40078	261 aa	Known RBP	0.56	□□□□□ -2.32
YDL196W	YDL196W	YPL073C	P40323	161 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	RFC2	P40348	353 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	GLR1	P41921	483 aa	Known RBP	0.56	□□□□□ -2.32
YDL196W	YDL196W	GPI14	P47088	403 aa	Known RBP	0.56	□□□□□ -2.32
YDL196W	YDL196W	YJR111C	P47148	283 aa	Known RBP	0.56	□□□□□ -2.32
YDL196W	YDL196W	MPA43	P53583	542 aa	Predicted RBP	0.56	□□□□□ -2.32
YDL196W	YDL196W	DAD4	P69851	72 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	TMA20	P89886	181 aa	Predicted RBP	0.56	□□□□□ -2.32
YDL196W	YDL196W	VPS28	Q02767	242 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	YMR099C	Q03161	297 aa	Known RBP	0.56	□□□□□ -2.32
YDL196W	YDL196W	YDR476C	Q03362	224 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	MAK3	Q03503	176 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	GPI17	Q04080	534 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	YLR162W	Q06235	118 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	PRP11	Q07350	266 aa	Predicted RBP	0.56	□□□□□ -2.32
YDL196W	YDL196W	CSI2	Q08054	341 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	IRC23	Q08416	157 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	YPR013C	Q12145	317 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	YOR214C	Q12282	236 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	PDR18	P53756	1333 aa		0.56	□□□□□ -2.32
YDL196W	YDL196W	MDM35	O60200	86 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	RAD6	P06104	172 aa		0.55	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms