RNA–Protein interactions for RNA: YDL156W

CMR1, Transcript of DNA-binding protein with preference for UV-damaged DNA, yeast

Gene CMR1, Length 1,569 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR1	YDL156W	TDA4	P47153	279 aa		4.99	□□□□□ -1.61
CMR1	YDL156W	INP1	Q03694	420 aa		4.99	□□□□□ -1.61
CMR1	YDL156W	NDD1	Q08887	554 aa		4.99	□□□□□ -1.61
CMR1	YDL156W	YOR214C	Q12282	236 aa		4.99	□□□□□ -1.61
CMR1	YDL156W	UTP30	P36144	274 aa	Known RBP	4.98	□□□□□ -1.61
CMR1	YDL156W	TEM1	P38987	245 aa		4.98	□□□□□ -1.61
CMR1	YDL156W	SAE3	P89114	91 aa		4.98	□□□□□ -1.61
CMR1	YDL156W	RPL21A	Q02753	160 aa	Known RBP	4.98	□□□□□ -1.61
CMR1	YDL156W	SLD7	Q08457	257 aa		4.98	□□□□□ -1.61
CMR1	YDL156W	SMT3	Q12306	101 aa	Known RBP	4.98	□□□□□ -1.61
CMR1	YDL156W	DGK1	Q12382	290 aa		4.98	□□□□□ -1.61
CMR1	YDL156W	ESP1	Q03018	1630 aa		4.97	□□□□□ -1.61
CMR1	YDL156W	LHP1	P33399	275 aa	Known RBP	4.97	□□□□□ -1.61
CMR1	YDL156W	SKG1	P36169	355 aa		4.97	□□□□□ -1.61
CMR1	YDL156W	AIM2	P39721	246 aa		4.97	□□□□□ -1.61
CMR1	YDL156W	MIC19	P43594	170 aa		4.97	□□□□□ -1.61
CMR1	YDL156W	CGI121	Q03705	181 aa	Known RBP	4.97	□□□□□ -1.61
CMR1	YDL156W	ATG5	Q12380	294 aa		4.97	□□□□□ -1.61
CMR1	YDL156W	YLR099W-A	Q3E798	87 aa		4.97	□□□□□ -1.61
CMR1	YDL156W	KOG1	P38873	1557 aa		4.97	□□□□□ -1.61
CMR1	YDL156W	AVT2	P39981	480 aa		4.96	□□□□□ -1.62
CMR1	YDL156W	ALG9	P53868	555 aa	Known RBP	4.96	□□□□□ -1.62
CMR1	YDL156W	YPL039W	Q03080	316 aa		4.96	□□□□□ -1.62
CMR1	YDL156W	YDR115W	Q04598	105 aa		4.96	□□□□□ -1.62
CMR1	YDL156W	IRC25	Q07951	179 aa		4.96	□□□□□ -1.62
CMR1	YDL156W	YPL264C	Q08980	353 aa		4.96	□□□□□ -1.62
CMR1	YDL156W	FCY1	Q12178	158 aa		4.96	□□□□□ -1.62
CMR1	YDL156W	VPS15	P22219	1454 aa		4.96	□□□□□ -1.62
CMR1	YDL156W	YPR170W-B	P0C5R9	85 aa		4.95	□□□□□ -1.62
CMR1	YDL156W	GCN2	P15442	1659 aa		4.95	□□□□□ -1.62
CMR1	YDL156W	RPB3	P16370	318 aa	Known RBP	4.95	□□□□□ -1.62
CMR1	YDL156W	MSA2	P36157	363 aa		4.95	□□□□□ -1.62
CMR1	YDL156W	YGR219W	P53307	113 aa		4.95	□□□□□ -1.62
CMR1	YDL156W	ACT1	P60010	375 aa	Known RBP	4.95	□□□□□ -1.62
CMR1	YDL156W	YMR244W	Q04018	355 aa		4.95	□□□□□ -1.62
CMR1	YDL156W	API2	Q04413	109 aa		4.95	□□□□□ -1.62
CMR1	YDL156W	BET1	P22804	142 aa		4.95	□□□□□ -1.62
CMR1	YDL156W	PRE7	P23724	241 aa	Known RBP	4.95	□□□□□ -1.62
CMR1	YDL156W	OM14	P38325	134 aa		4.95	□□□□□ -1.62
CMR1	YDL156W	NSG1	P38837	291 aa		4.95	□□□□□ -1.62
CMR1	YDL156W	PTH1	P38876	190 aa	Known RBP	4.95	□□□□□ -1.62
CMR1	YDL156W	YND1	P40009	630 aa		4.95	□□□□□ -1.62
CMR1	YDL156W	SYS1	P41544	203 aa		4.95	□□□□□ -1.62
CMR1	YDL156W	FIP1	P45976	327 aa		4.95	□□□□□ -1.62
CMR1	YDL156W	YGR017W	P53210	297 aa		4.95	□□□□□ -1.62
CMR1	YDL156W	VPS71	Q03433	280 aa		4.95	□□□□□ -1.62
CMR1	YDL156W	YIL177C	P40434	1758 aa		4.94	□□□□□ -1.62
CMR1	YDL156W	YJL225C	P40889	1758 aa		4.94	□□□□□ -1.62
CMR1	YDL156W	RKR1	Q04781	1562 aa		4.94	□□□□□ -1.62
CMR1	YDL156W	FMP49	A0A023PZB3	126 aa		4.94	□□□□□ -1.62
CMR1	YDL156W	ADH3	P07246	375 aa	Known RBP	4.94	□□□□□ -1.62
CMR1	YDL156W	TIR1	P10863	254 aa		4.94	□□□□□ -1.62
CMR1	YDL156W	CCA1	P21269	546 aa		4.94	□□□□□ -1.62
CMR1	YDL156W	SUI1	P32911	108 aa	Known RBP	4.94	□□□□□ -1.62
CMR1	YDL156W	ZRT3	P34240	503 aa		4.94	□□□□□ -1.62
CMR1	YDL156W	BAT1	P38891	393 aa	Known RBP	4.94	□□□□□ -1.62
CMR1	YDL156W	PFS2	P42841	465 aa	Known RBP	4.94	□□□□□ -1.62
CMR1	YDL156W	YMR253C	Q04835	414 aa		4.94	□□□□□ -1.62
CMR1	YDL156W	PST1	Q12355	444 aa		4.94	□□□□□ -1.62
CMR1	YDL156W	PDR15	Q04182	1529 aa	Known RBP	4.93	□□□□□ -1.62
CMR1	YDL156W	GEA2	P39993	1459 aa	Known RBP	4.93	□□□□□ -1.62
CMR1	YDL156W	ATP5	P09457	212 aa		4.93	□□□□□ -1.62
CMR1	YDL156W	URA5	P13298	226 aa	Known RBP	4.93	□□□□□ -1.62
CMR1	YDL156W	PTC1	P35182	281 aa		4.93	□□□□□ -1.62
CMR1	YDL156W	COS8	P38723	381 aa		4.93	□□□□□ -1.62
CMR1	YDL156W	YGL118C	P53132	145 aa		4.93	□□□□□ -1.62
CMR1	YDL156W	SML1	Q04964	104 aa		4.93	□□□□□ -1.62
CMR1	YDL156W	YTH1	Q06102	208 aa	Predicted RBP	4.93	□□□□□ -1.62
CMR1	YDL156W	YLR412C-A	Q3E742	68 aa		4.93	□□□□□ -1.62
CMR1	YDL156W	YCL021W-A	Q96VH3	125 aa		4.93	□□□□□ -1.62
CMR1	YDL156W	MRPL17	P36528	281 aa		4.92	□□□□□ -1.62
CMR1	YDL156W	ASP1	P38986	381 aa	Predicted RBP	4.92	□□□□□ -1.62
CMR1	YDL156W	YER181C	P40097	107 aa		4.92	□□□□□ -1.62
CMR1	YDL156W	TVP15	Q03860	143 aa		4.92	□□□□□ -1.62
CMR1	YDL156W	PBA1	Q05778	276 aa		4.92	□□□□□ -1.62
CMR1	YDL156W	YPR114W	Q06107	315 aa		4.92	□□□□□ -1.62
CMR1	YDL156W	ZEO1	Q08245	113 aa		4.92	□□□□□ -1.62
CMR1	YDL156W	PSF1	Q12488	208 aa		4.92	□□□□□ -1.62
CMR1	YDL156W	YER078W-A	Q3E7A2	54 aa		4.92	□□□□□ -1.62
CMR1	YDL156W	YCL001W-B	Q96VH2	84 aa		4.92	□□□□□ -1.62
CMR1	YDL156W	PDR5	P33302	1511 aa	Known RBP	4.92	□□□□□ -1.62
CMR1	YDL156W	BNR1	P40450	1375 aa		4.92	□□□□□ -1.62
CMR1	YDL156W	DNF1	P32660	1571 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	DDI2	P0CH63	225 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	DDI3	P0CH64	225 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	NSP1	P14907	823 aa	Known RBP	4.91	□□□□□ -1.62
CMR1	YDL156W	SRP21	P32342	167 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	HYM1	P32464	399 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	YAR068W	P39564	161 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	RIO2	P40160	425 aa	Known RBP	4.91	□□□□□ -1.62
CMR1	YDL156W	YIL054W	P40524	105 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	GLR1	P41921	483 aa	Known RBP	4.91	□□□□□ -1.62
CMR1	YDL156W	SER2	P42941	309 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	TMA23	Q03525	211 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	MCP1	Q12106	302 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	DFM1	Q12743	341 aa	Known RBP	4.91	□□□□□ -1.62
CMR1	YDL156W	YNL277W-A	Q3E7Z0	62 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	PHO13	P19881	312 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	PCL1	P24867	279 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	SNC2	P33328	115 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms