RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C VMA21P41806 77 aa1.79□□□□□ -2.12
BRE1YDL074C YNR040WP53736 256 aa1.79□□□□□ -2.12
BRE1YDL074C YMR279CQ03263 540 aa1.79□□□□□ -2.12
BRE1YDL074C ATC1Q04005 294 aa1.79□□□□□ -2.12
BRE1YDL074C FSH2Q05015 223 aa1.79□□□□□ -2.12
BRE1YDL074C DXO1Q06349 442 aa1.79□□□□□ -2.12
BRE1YDL074C YDL242WQ07746 117 aa1.79□□□□□ -2.12
BRE1YDL074C YPL278CQ08990 100 aa1.79□□□□□ -2.12
BRE1YDL074C RAD28Q12021 506 aa1.79□□□□□ -2.12
BRE1YDL074C PIN2Q12057 282 aa1.79□□□□□ -2.12
BRE1YDL074C SWT1Q12104 458 aa1.79□□□□□ -2.12
BRE1YDL074C YOR015WQ12169 119 aa1.79□□□□□ -2.12
BRE1YDL074C PRR2Q12310 699 aa1.79□□□□□ -2.12
BRE1YDL074C YLR118CQ12354 227 aa1.79□□□□□ -2.12
BRE1YDL074C MPD1Q12404 318 aaKnown RBP1.79□□□□□ -2.12
BRE1YDL074C BOL1Q3E793 110 aa1.79□□□□□ -2.12
BRE1YDL074C COA6Q3E846 104 aa1.79□□□□□ -2.12
BRE1YDL074C Q0142Q9ZZW4 58 aa1.79□□□□□ -2.12
BRE1YDL074C NHP6AP11632 93 aaKnown RBP1.79□□□□□ -2.12
BRE1YDL074C AFR1P33304 620 aa1.79□□□□□ -2.12
BRE1YDL074C YOX1P34161 385 aa1.79□□□□□ -2.12
BRE1YDL074C CDS1P38221 457 aa1.79□□□□□ -2.12
BRE1YDL074C YBR220CP38318 560 aa1.79□□□□□ -2.12
BRE1YDL074C YEL057CP39983 233 aa1.79□□□□□ -2.12
BRE1YDL074C NSA2P40078 261 aaKnown RBP1.79□□□□□ -2.12
BRE1YDL074C SAS2P40963 338 aa1.79□□□□□ -2.12
BRE1YDL074C BOR1P53838 576 aa1.79□□□□□ -2.12
BRE1YDL074C YNL046WP53956 172 aa1.79□□□□□ -2.12
BRE1YDL074C YPL077CQ02831 240 aa1.79□□□□□ -2.12
BRE1YDL074C NRG1Q03125 231 aa1.79□□□□□ -2.12
BRE1YDL074C SNO1Q03144 224 aa1.79□□□□□ -2.12
BRE1YDL074C YMR253CQ04835 414 aa1.79□□□□□ -2.12
BRE1YDL074C MCH1Q07376 486 aa1.79□□□□□ -2.12
BRE1YDL074C YOP1Q12402 180 aa1.79□□□□□ -2.12
BRE1YDL074C RPS25BP0C0T4 108 aaKnown RBP1.78□□□□□ -2.12
BRE1YDL074C PAU19P0CE85 124 aa1.78□□□□□ -2.12
BRE1YDL074C PAU21P0CE86 164 aa1.78□□□□□ -2.12
BRE1YDL074C PAU22P0CE87 164 aa1.78□□□□□ -2.12
BRE1YDL074C URA5P13298 226 aaKnown RBP1.78□□□□□ -2.12
BRE1YDL074C FCY2P17064 533 aa1.78□□□□□ -2.12
BRE1YDL074C APA2P22108 325 aa1.78□□□□□ -2.12
BRE1YDL074C SPO13P23624 291 aa1.78□□□□□ -2.12
BRE1YDL074C PCL1P24867 279 aa1.78□□□□□ -2.12
BRE1YDL074C PAU3P25610 124 aa1.78□□□□□ -2.12
BRE1YDL074C ATG15P25641 520 aa1.78□□□□□ -2.12
BRE1YDL074C AHT1P29589 182 aa1.78□□□□□ -2.12
BRE1YDL074C HMX1P32339 317 aa1.78□□□□□ -2.12
BRE1YDL074C SPS18P32572 300 aa1.78□□□□□ -2.12
BRE1YDL074C YKL107WP34251 309 aa1.78□□□□□ -2.12
BRE1YDL074C SDH4P37298 181 aa1.78□□□□□ -2.12
BRE1YDL074C ICS2P38284 255 aa1.78□□□□□ -2.12
BRE1YDL074C YBR184WP38299 523 aa1.78□□□□□ -2.12
BRE1YDL074C YHL044WP38727 235 aa1.78□□□□□ -2.12
BRE1YDL074C RFC2P40348 353 aa1.78□□□□□ -2.12
BRE1YDL074C DAN1P47178 298 aa1.78□□□□□ -2.12
BRE1YDL074C MIC27P50945 234 aa1.78□□□□□ -2.12
BRE1YDL074C YIP1P53039 248 aa1.78□□□□□ -2.12
BRE1YDL074C YGR050CP53231 118 aa1.78□□□□□ -2.12
BRE1YDL074C CRZ1P53968 678 aa1.78□□□□□ -2.12
BRE1YDL074C DAD3P69850 94 aa1.78□□□□□ -2.12
BRE1YDL074C RPL21AQ02753 160 aaKnown RBP1.78□□□□□ -2.12
BRE1YDL074C SDH7Q04401 133 aa1.78□□□□□ -2.12
BRE1YDL074C AVO2Q04749 426 aa1.78□□□□□ -2.12
BRE1YDL074C CRR1Q05790 422 aa1.78□□□□□ -2.12
BRE1YDL074C ARR2Q06597 130 aa1.78□□□□□ -2.12
BRE1YDL074C CTR3Q06686 241 aa1.78□□□□□ -2.12
BRE1YDL074C YDL218WQ07629 317 aa1.78□□□□□ -2.12
BRE1YDL074C YPR063CQ12160 140 aa1.78□□□□□ -2.12
BRE1YDL074C RFM1Q12192 310 aa1.78□□□□□ -2.12
BRE1YDL074C RPL21BQ12672 160 aaKnown RBP1.78□□□□□ -2.12
BRE1YDL074C SPO24Q3E752 67 aa1.78□□□□□ -2.12
BRE1YDL074C RPS25AQ3E792 108 aaPredicted RBP1.78□□□□□ -2.12
BRE1YDL074C COA2Q3E823 68 aa1.78□□□□□ -2.12
BRE1YDL074C COX2P00410 251 aa1.78□□□□□ -2.13
BRE1YDL074C HEM13P11353 328 aaKnown RBP1.78□□□□□ -2.13
BRE1YDL074C HSP12P22943 109 aaKnown RBP1.78□□□□□ -2.13
BRE1YDL074C PRE9P23638 258 aaKnown RBP1.78□□□□□ -2.13
BRE1YDL074C TOM40P23644 387 aaKnown RBP1.78□□□□□ -2.13
BRE1YDL074C DAL3P32459 195 aa1.78□□□□□ -2.13
BRE1YDL074C YBL059WP34224 193 aa1.78□□□□□ -2.13
BRE1YDL074C RPB11P38902 120 aa1.78□□□□□ -2.13
BRE1YDL074C NSE4P43124 402 aa1.78□□□□□ -2.13
BRE1YDL074C PAU5P43575 122 aa1.78□□□□□ -2.13
BRE1YDL074C GPI2P46961 280 aa1.78□□□□□ -2.13
BRE1YDL074C ARP3P47117 449 aaKnown RBP1.78□□□□□ -2.13
BRE1YDL074C YGR026WP53217 278 aa1.78□□□□□ -2.13
BRE1YDL074C WSC2P53832 503 aa1.78□□□□□ -2.13
BRE1YDL074C DAL4Q04895 635 aa1.78□□□□□ -2.13
BRE1YDL074C FRQ1Q06389 190 aa1.78□□□□□ -2.13
BRE1YDL074C MSL5Q12186 476 aaKnown RBP RIP-Chip data1.78□□□□□ -2.13not detected
BRE1YDL074C SMT3Q12306 101 aaKnown RBP1.78□□□□□ -2.13
BRE1YDL074C ATG5Q12380 294 aa1.78□□□□□ -2.13
BRE1YDL074C DCN1Q12395 269 aa1.78□□□□□ -2.13
BRE1YDL074C FOL3Q12676 427 aaPredicted RBP1.78□□□□□ -2.13
BRE1YDL074C FMP49A0A023PZB3 126 aa1.77□□□□□ -2.13
BRE1YDL074C ILV5P06168 395 aaKnown RBP1.77□□□□□ -2.13
BRE1YDL074C BGL2P15703 313 aaKnown RBP1.77□□□□□ -2.13
BRE1YDL074C PHO85P17157 305 aa1.77□□□□□ -2.13
BRE1YDL074C CDC50P25656 391 aa1.77□□□□□ -2.13
BRE1YDL074C SUA7P29055 345 aaPredicted RBP1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms