RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W ERV1P27882 189 aa5.72□□□□□ -1.49
BDF2YDL070W AFG1P32317 509 aa5.72□□□□□ -1.49
BDF2YDL070W YJL028WP47062 111 aa5.72□□□□□ -1.49
BDF2YDL070W HSV2P50079 448 aaPredicted RBP5.72□□□□□ -1.49
BDF2YDL070W YNL165WP53891 406 aa5.72□□□□□ -1.49
BDF2YDL070W AQR1P53943 586 aa5.72□□□□□ -1.49
BDF2YDL070W DIG2Q03373 323 aaKnown RBP5.72□□□□□ -1.49
BDF2YDL070W MCH4Q08268 501 aa5.72□□□□□ -1.49
BDF2YDL070W MCP1Q12106 302 aa5.72□□□□□ -1.49
BDF2YDL070W GAL7P08431 366 aa5.72□□□□□ -1.49
BDF2YDL070W SPT15P13393 240 aaKnown RBP5.72□□□□□ -1.49
BDF2YDL070W ERS1P17261 260 aa5.72□□□□□ -1.49
BDF2YDL070W FMP46P36141 133 aaKnown RBP5.72□□□□□ -1.49
BDF2YDL070W YIL169CP40442 995 aa5.72□□□□□ -1.49
BDF2YDL070W TAF4P50105 388 aa5.72□□□□□ -1.49
BDF2YDL070W NIS1P53939 407 aa5.72□□□□□ -1.49
BDF2YDL070W YMR166CQ03829 368 aa5.72□□□□□ -1.49
BDF2YDL070W YAP6Q03935 383 aa5.72□□□□□ -1.49
BDF2YDL070W YDR444WQ04093 687 aa5.72□□□□□ -1.49
BDF2YDL070W HUT1Q12520 339 aa5.72□□□□□ -1.49
BDF2YDL070W YLR365WQ7LIF2 110 aa5.72□□□□□ -1.49
BDF2YDL070W CPR1P14832 162 aaKnown RBP5.71□□□□□ -1.5
BDF2YDL070W PCL1P24867 279 aa5.71□□□□□ -1.5
BDF2YDL070W WSC4P38739 605 aa5.71□□□□□ -1.5
BDF2YDL070W PRE5P40302 234 aaKnown RBP5.71□□□□□ -1.5
BDF2YDL070W TRI1Q05024 226 aa5.71□□□□□ -1.5
BDF2YDL070W LDS2Q08218 356 aa5.71□□□□□ -1.5
BDF2YDL070W YOR105WQ08504 108 aa5.71□□□□□ -1.5
BDF2YDL070W YPL264CQ08980 353 aa5.71□□□□□ -1.5
BDF2YDL070W HUG1Q6Q5K6 68 aa5.71□□□□□ -1.5
BDF2YDL070W DAT1P13483 248 aaKnown RBP5.7□□□□□ -1.5
BDF2YDL070W SCO1P23833 295 aa5.7□□□□□ -1.5
BDF2YDL070W QDR3P38227 689 aa5.7□□□□□ -1.5
BDF2YDL070W RPA43P46669 326 aa5.7□□□□□ -1.5
BDF2YDL070W TUB4P53378 473 aa5.7□□□□□ -1.5
BDF2YDL070W YNR040WP53736 256 aa5.7□□□□□ -1.5
BDF2YDL070W HED1Q03937 162 aa5.7□□□□□ -1.5
BDF2YDL070W ATG39Q06159 398 aa5.7□□□□□ -1.5
BDF2YDL070W PAM18Q07914 168 aa5.7□□□□□ -1.5
BDF2YDL070W FRE8Q12209 686 aa5.7□□□□□ -1.5
BDF2YDL070W RDL1Q12305 139 aaKnown RBP5.7□□□□□ -1.5
BDF2YDL070W RPS22AP0C0W1 130 aaKnown RBP5.7□□□□□ -1.5
BDF2YDL070W QCR9P22289 66 aa5.7□□□□□ -1.5
BDF2YDL070W OCH1P31755 480 aa5.7□□□□□ -1.5
BDF2YDL070W MTR2P34232 184 aaKnown RBP5.7□□□□□ -1.5
BDF2YDL070W TEM1P38987 245 aa5.7□□□□□ -1.5
BDF2YDL070W ATF1P40353 525 aa5.7□□□□□ -1.5
BDF2YDL070W MID1P41821 548 aa5.7□□□□□ -1.5
BDF2YDL070W ZIM17P42844 174 aa5.7□□□□□ -1.5
BDF2YDL070W GPI2P46961 280 aa5.7□□□□□ -1.5
BDF2YDL070W ABM1P47146 123 aa5.7□□□□□ -1.5
BDF2YDL070W CRH1P53301 507 aa5.7□□□□□ -1.5
BDF2YDL070W CNL1Q06333 122 aa5.7□□□□□ -1.5
BDF2YDL070W MES1P00958 751 aaKnown RBP5.69□□□□□ -1.5
BDF2YDL070W NOP1P15646 327 aaKnown RBP5.69□□□□□ -1.5
BDF2YDL070W YGR269WP40326 108 aa5.69□□□□□ -1.5
BDF2YDL070W CUP9P41817 306 aa5.69□□□□□ -1.5
BDF2YDL070W SSU72P53538 206 aaPredicted RBP5.69□□□□□ -1.5
BDF2YDL070W SMT3Q12306 101 aaKnown RBP5.69□□□□□ -1.5
BDF2YDL070W YPR108W-AQ3E7B3 70 aa5.69□□□□□ -1.5
BDF2YDL070W YCR024C-BQ3E7Z8 88 aa5.69□□□□□ -1.5
BDF2YDL070W MBF1O14467 151 aaKnown RBP5.68□□□□□ -1.5
BDF2YDL070W YCR007CP25354 239 aa5.68□□□□□ -1.5
BDF2YDL070W ARO2P28777 376 aaKnown RBP5.68□□□□□ -1.5
BDF2YDL070W HOG1P32485 435 aa5.68□□□□□ -1.5
BDF2YDL070W RPB7P34087 171 aa5.68□□□□□ -1.5
BDF2YDL070W PAM17P36147 197 aa5.68□□□□□ -1.5
BDF2YDL070W LSM2P38203 95 aaKnown RBP5.68□□□□□ -1.5
BDF2YDL070W LYS1P38998 373 aaRIP-Chip data5.68□□□□□ -1.5not detected
BDF2YDL070W YND1P40009 630 aa5.68□□□□□ -1.5
BDF2YDL070W ADH6Q04894 360 aaKnown RBP5.68□□□□□ -1.5
BDF2YDL070W ARR3Q06598 404 aa5.68□□□□□ -1.5
BDF2YDL070W YOL029CQ08187 201 aa5.68□□□□□ -1.5
BDF2YDL070W YPL162CQ12042 273 aa5.68□□□□□ -1.5
BDF2YDL070W PIN2Q12057 282 aa5.68□□□□□ -1.5
BDF2YDL070W USV1Q12132 391 aa5.68□□□□□ -1.5
BDF2YDL070W YBR255C-AQ3E776 120 aa5.68□□□□□ -1.5
BDF2YDL070W SLO1Q3E784 85 aa5.68□□□□□ -1.5
BDF2YDL070W SCS22Q6Q595 175 aa5.68□□□□□ -1.5
BDF2YDL070W AIM17P23180 465 aaKnown RBP5.68□□□□□ -1.5
BDF2YDL070W IMG1P25626 169 aa5.68□□□□□ -1.5
BDF2YDL070W BAT1P38891 393 aaKnown RBP5.68□□□□□ -1.5
BDF2YDL070W HAC1P41546 238 aa5.68□□□□□ -1.5
BDF2YDL070W XPT1P47165 209 aa5.68□□□□□ -1.5
BDF2YDL070W YMR007WQ03675 126 aa5.68□□□□□ -1.5
BDF2YDL070W YDR286CQ05530 114 aa5.68□□□□□ -1.5
BDF2YDL070W YPR174CQ06616 221 aaPredicted RBP5.68□□□□□ -1.5
BDF2YDL070W IRC19Q07843 230 aa5.68□□□□□ -1.5
BDF2YDL070W CSM4Q08955 156 aa5.68□□□□□ -1.5
BDF2YDL070W ALG6Q12001 544 aaKnown RBP5.68□□□□□ -1.5
BDF2YDL070W YLR050CQ12155 161 aaKnown RBP5.68□□□□□ -1.5
BDF2YDL070W ANB1P19211 157 aa5.67□□□□□ -1.5
BDF2YDL070W YBL059WP34224 193 aa5.67□□□□□ -1.5
BDF2YDL070W SRP14P38985 146 aa5.67□□□□□ -1.5
BDF2YDL070W UME6P39001 836 aa5.67□□□□□ -1.5
BDF2YDL070W OSW5P40219 148 aa5.67□□□□□ -1.5
BDF2YDL070W YGL230CP53074 147 aa5.67□□□□□ -1.5
BDF2YDL070W YGR017WP53210 297 aa5.67□□□□□ -1.5
BDF2YDL070W LOA1Q06508 300 aa5.67□□□□□ -1.5
BDF2YDL070W PAI3P01094 68 aa5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms