RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W YGL010WP25338 174 aa1.93□□□□□ -2.1
MCD1YDL003W TKL2P33315 681 aa1.93□□□□□ -2.1
MCD1YDL003W PAU16P35994 123 aa1.93□□□□□ -2.1
MCD1YDL003W AGP2P38090 596 aa1.93□□□□□ -2.1
MCD1YDL003W OXA1P39952 402 aa1.93□□□□□ -2.1
MCD1YDL003W YPS6P40583 537 aa1.93□□□□□ -2.1
MCD1YDL003W HIT1P46973 164 aa1.93□□□□□ -2.1
MCD1YDL003W SFH5P47008 294 aa1.93□□□□□ -2.1
MCD1YDL003W YJR120WP47157 116 aa1.93□□□□□ -2.1
MCD1YDL003W BAT2P47176 376 aaKnown RBP1.93□□□□□ -2.1
MCD1YDL003W PMT3P47190 753 aa1.93□□□□□ -2.1
MCD1YDL003W SGF73P53165 657 aa1.93□□□□□ -2.1
MCD1YDL003W DUO1P53168 247 aaKnown RBP1.93□□□□□ -2.1
MCD1YDL003W LST7P53237 242 aa1.93□□□□□ -2.1
MCD1YDL003W YGR117CP53270 476 aa1.93□□□□□ -2.1
MCD1YDL003W CAB4P53332 305 aa1.93□□□□□ -2.1
MCD1YDL003W PAU4P53427 120 aa1.93□□□□□ -2.1
MCD1YDL003W YNR064CP53750 290 aa1.93□□□□□ -2.1
MCD1YDL003W RNH201P53942 307 aa1.93□□□□□ -2.1
MCD1YDL003W SUR7P54003 302 aa1.93□□□□□ -2.1
MCD1YDL003W YLR460CP54007 376 aa1.93□□□□□ -2.1
MCD1YDL003W EST3Q03096 181 aa1.93□□□□□ -2.1
MCD1YDL003W GRX8Q05926 109 aa1.93□□□□□ -2.1
MCD1YDL003W YPR174CQ06616 221 aaPredicted RBP1.93□□□□□ -2.1
MCD1YDL003W MCP1Q12106 302 aa1.93□□□□□ -2.1
MCD1YDL003W RAX2Q12465 1220 aa1.93□□□□□ -2.1
MCD1YDL003W ODC2Q99297 307 aa1.93□□□□□ -2.1
MCD1YDL003W YOR338WQ99326 363 aa1.93□□□□□ -2.1
MCD1YDL003W MBF1O14467 151 aaKnown RBP1.92□□□□□ -2.1
MCD1YDL003W TDH3P00359 332 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
MCD1YDL003W COX5AP00424 153 aa1.92□□□□□ -2.1
MCD1YDL003W MES1P00958 751 aaKnown RBP1.92□□□□□ -2.1
MCD1YDL003W VAR1P02381 398 aa1.92□□□□□ -2.1
MCD1YDL003W PAU1P0CE88 120 aa1.92□□□□□ -2.1
MCD1YDL003W PAU14P0CE89 120 aa1.92□□□□□ -2.1
MCD1YDL003W PAU6P0CE90 120 aa1.92□□□□□ -2.1
MCD1YDL003W PAU18P0CE91 120 aa1.92□□□□□ -2.1
MCD1YDL003W PAU8P0CE92 120 aa1.92□□□□□ -2.1
MCD1YDL003W PAU11P0CE93 120 aa1.92□□□□□ -2.1
MCD1YDL003W SPT15P13393 240 aaKnown RBP1.92□□□□□ -2.1
MCD1YDL003W SAG1P20840 650 aa1.92□□□□□ -2.1
MCD1YDL003W MKK1P32490 508 aa1.92□□□□□ -2.1
MCD1YDL003W SRB5P32585 307 aa1.92□□□□□ -2.1
MCD1YDL003W SLC1P33333 303 aa1.92□□□□□ -2.1
MCD1YDL003W MCH2P36032 473 aa1.92□□□□□ -2.1
MCD1YDL003W RPL14AP36105 138 aaKnown RBP1.92□□□□□ -2.1
MCD1YDL003W MRPL27P36526 146 aaPredicted RBP1.92□□□□□ -2.1
MCD1YDL003W DER1P38307 211 aa1.92□□□□□ -2.1
MCD1YDL003W SLM6P38343 150 aa1.92□□□□□ -2.1
MCD1YDL003W PAU13P38725 120 aa1.92□□□□□ -2.1
MCD1YDL003W RPL14BP38754 138 aaKnown RBP1.92□□□□□ -2.1
MCD1YDL003W YHR138CP38841 114 aaPredicted RBP1.92□□□□□ -2.1
MCD1YDL003W BAT1P38891 393 aaKnown RBP1.92□□□□□ -2.1
MCD1YDL003W GPP2P40106 250 aaKnown RBP1.92□□□□□ -2.1
MCD1YDL003W YJL068CP40363 299 aa1.92□□□□□ -2.1
MCD1YDL003W YIL089WP40500 205 aa1.92□□□□□ -2.1
MCD1YDL003W CDC40P40968 455 aaPredicted RBP1.92□□□□□ -2.1
MCD1YDL003W HAC1P41546 238 aa1.92□□□□□ -2.1
MCD1YDL003W ERG25P53045 309 aa1.92□□□□□ -2.1
MCD1YDL003W MTM1P53320 366 aa1.92□□□□□ -2.1
MCD1YDL003W ALG9P53868 555 aaKnown RBP1.92□□□□□ -2.1
MCD1YDL003W DUG3P53871 357 aa1.92□□□□□ -2.1
MCD1YDL003W IGO1P53897 168 aa1.92□□□□□ -2.1
MCD1YDL003W PAU10Q03050 120 aa1.92□□□□□ -2.1
MCD1YDL003W YMR254CQ04838 102 aa1.92□□□□□ -2.1
MCD1YDL003W HRI1Q05905 244 aaKnown RBP1.92□□□□□ -2.1
MCD1YDL003W YPR098CQ06089 161 aa1.92□□□□□ -2.1
MCD1YDL003W PAU20Q08322 120 aa1.92□□□□□ -2.1
MCD1YDL003W HSP33Q08914 237 aaKnown RBP1.92□□□□□ -2.1
MCD1YDL003W YDL157CQ12082 118 aa1.92□□□□□ -2.1
MCD1YDL003W PAU9Q3E770 120 aa1.92□□□□□ -2.1
MCD1YDL003W UBR2Q07963 1872 aa1.91□□□□□ -2.1
MCD1YDL003W FMP49A0A023PZB3 126 aa1.91□□□□□ -2.1
MCD1YDL003W POR1P04840 283 aaKnown RBP1.91□□□□□ -2.1
MCD1YDL003W GAL7P08431 366 aa1.91□□□□□ -2.1
MCD1YDL003W YOL162WP0CF19 215 aa1.91□□□□□ -2.1
MCD1YDL003W YAR066WP0CX18 203 aa1.91□□□□□ -2.1
MCD1YDL003W YHR214WP0CX19 203 aa1.91□□□□□ -2.1
MCD1YDL003W RPL1AP0CX43 217 aaKnown RBP1.91□□□□□ -2.1
MCD1YDL003W RPL1BP0CX44 217 aaKnown RBP1.91□□□□□ -2.1
MCD1YDL003W ADK2P26364 225 aa1.91□□□□□ -2.1
MCD1YDL003W SOR1P35497 357 aaKnown RBP1.91□□□□□ -2.1
MCD1YDL003W CMC1P36064 111 aa1.91□□□□□ -2.1
MCD1YDL003W YBR071WP38243 211 aa1.91□□□□□ -2.1
MCD1YDL003W WSC4P38739 605 aa1.91□□□□□ -2.1
MCD1YDL003W SEC24P40482 926 aaKnown RBP1.91□□□□□ -2.1
MCD1YDL003W GPP1P41277 250 aaKnown RBP1.91□□□□□ -2.1
MCD1YDL003W ERJ5P43613 295 aaPredicted RBP1.91□□□□□ -2.1
MCD1YDL003W YJR015WP47090 510 aa1.91□□□□□ -2.1
MCD1YDL003W ARP3P47117 449 aaKnown RBP1.91□□□□□ -2.1
MCD1YDL003W COQ5P49017 307 aa1.91□□□□□ -2.1
MCD1YDL003W YGR015CP53208 328 aa1.91□□□□□ -2.1
MCD1YDL003W SKO1Q02100 647 aa1.91□□□□□ -2.1
MCD1YDL003W TSA2Q04120 196 aa1.91□□□□□ -2.1
MCD1YDL003W YMR090WQ04304 227 aaKnown RBP1.91□□□□□ -2.1
MCD1YDL003W SPG3Q04398 127 aaPredicted RBP1.91□□□□□ -2.1
MCD1YDL003W RIM9Q04734 239 aa1.91□□□□□ -2.1
MCD1YDL003W SNO4Q04902 237 aa1.91□□□□□ -2.1
MCD1YDL003W FSH2Q05015 223 aa1.91□□□□□ -2.1
MCD1YDL003W NAT3Q06504 195 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms