RNA–Protein interactions for RNA: YBL037W

APL3, Transcript of Alpha-adaptin, yeast

Gene APL3, Length 3,078 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL3	YBL037W	LSM7	P53905	115 aa	Known RBP	0.83	□□□□□ -2.28
APL3	YBL037W	DID2	P69771	204 aa		0.83	□□□□□ -2.28
APL3	YBL037W	YPL162C	Q12042	273 aa		0.83	□□□□□ -2.28
APL3	YBL037W	FKS1	P38631	1876 aa	Known RBP	0.83	□□□□□ -2.28
APL3	YBL037W	SIR2	P06700	562 aa		0.83	□□□□□ -2.28
APL3	YBL037W	FBA1	P14540	359 aa	Known RBP	0.83	□□□□□ -2.28
APL3	YBL037W	CLB6	P32943	380 aa		0.83	□□□□□ -2.28
APL3	YBL037W	TAF14	P35189	244 aa		0.83	□□□□□ -2.28
APL3	YBL037W	ECM33	P38248	429 aa	Known RBP	0.83	□□□□□ -2.28
APL3	YBL037W	PDS1	P40316	373 aa	Predicted RBP	0.83	□□□□□ -2.28
APL3	YBL037W	TMA22	P47089	198 aa	Predicted RBP	0.83	□□□□□ -2.28
APL3	YBL037W	AIF1	P52923	378 aa		0.83	□□□□□ -2.28
APL3	YBL037W	NOP19	P53317	196 aa	Predicted RBP	0.83	□□□□□ -2.28
APL3	YBL037W	EMC6	Q12431	108 aa		0.83	□□□□□ -2.28
APL3	YBL037W	TSC3	Q3E790	80 aa		0.83	□□□□□ -2.28
APL3	YBL037W	YDR034W-B	Q6Q5X2	51 aa		0.83	□□□□□ -2.28
APL3	YBL037W	YHR214C-E	Q8TGK0	99 aa		0.83	□□□□□ -2.28
APL3	YBL037W	ADE6	P38972	1358 aa	Known RBP	0.82	□□□□□ -2.28
APL3	YBL037W	IKI3	Q06706	1349 aa	Known RBP	0.82	□□□□□ -2.28
APL3	YBL037W	QCR7	P00128	127 aa		0.82	□□□□□ -2.28
APL3	YBL037W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.82	□□□□□ -2.28	not detected
APL3	YBL037W	SNC2	P33328	115 aa		0.82	□□□□□ -2.28
APL3	YBL037W	ECM4	P36156	370 aa		0.82	□□□□□ -2.28
APL3	YBL037W	AVT2	P39981	480 aa		0.82	□□□□□ -2.28
APL3	YBL037W	PGD1	P40356	397 aa		0.82	□□□□□ -2.28
APL3	YBL037W	TOS8	P53147	276 aa		0.82	□□□□□ -2.28
APL3	YBL037W	YNL010W	P53981	241 aa	Known RBP	0.82	□□□□□ -2.28
APL3	YBL037W	RGM1	Q00453	211 aa		0.82	□□□□□ -2.28
APL3	YBL037W	HRT1	Q08273	121 aa		0.82	□□□□□ -2.28
APL3	YBL037W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.82	□□□□□ -2.28
APL3	YBL037W	YPR014C	Q6B0W2	109 aa		0.82	□□□□□ -2.28
APL3	YBL037W	KRE5	P22023	1365 aa		0.82	□□□□□ -2.28
APL3	YBL037W	YLR156W	P0CE96	114 aa		0.82	□□□□□ -2.28
APL3	YBL037W	YLR159W	P0CE97	114 aa		0.82	□□□□□ -2.28
APL3	YBL037W	YLR161W	P0CE98	114 aa		0.82	□□□□□ -2.28
APL3	YBL037W	SNF4	P12904	322 aa		0.82	□□□□□ -2.28
APL3	YBL037W	SEN2	P16658	377 aa		0.82	□□□□□ -2.28
APL3	YBL037W	YCR090C	P25654	182 aa	Known RBP	0.82	□□□□□ -2.28
APL3	YBL037W	RPL33B	P41056	107 aa	Known RBP	0.82	□□□□□ -2.28
APL3	YBL037W	NEJ1	Q06148	342 aa		0.82	□□□□□ -2.28
APL3	YBL037W	CDC7	P06243	507 aa		0.81	□□□□□ -2.28
APL3	YBL037W	SCO1	P23833	295 aa		0.81	□□□□□ -2.28
APL3	YBL037W	SEC14	P24280	304 aa	Known RBP	0.81	□□□□□ -2.28
APL3	YBL037W	TAH1	P25638	111 aa	Predicted RBP	0.81	□□□□□ -2.28
APL3	YBL037W	SRY1	P36007	326 aa		0.81	□□□□□ -2.28
APL3	YBL037W	ERV15	P38312	142 aa		0.81	□□□□□ -2.28
APL3	YBL037W	EGD2	P38879	174 aa	Known RBP	0.81	□□□□□ -2.28
APL3	YBL037W	YJR146W	P47174	117 aa		0.81	□□□□□ -2.28
APL3	YBL037W	YOL160W	Q08321	113 aa		0.81	□□□□□ -2.28
APL3	YBL037W	YOR283W	Q12040	230 aa	Known RBP	0.81	□□□□□ -2.28
APL3	YBL037W	CMC2	Q3E7A4	109 aa		0.81	□□□□□ -2.28
APL3	YBL037W	PEX4	P29340	183 aa		0.81	□□□□□ -2.28
APL3	YBL037W	YET1	P35723	206 aa		0.81	□□□□□ -2.28
APL3	YBL037W	MED6	P38782	295 aa		0.81	□□□□□ -2.28
APL3	YBL037W	SRP14	P38985	146 aa		0.81	□□□□□ -2.28
APL3	YBL037W	RPA43	P46669	326 aa		0.81	□□□□□ -2.28
APL3	YBL037W	COS6	P53344	381 aa		0.81	□□□□□ -2.28
APL3	YBL037W	YNR062C	P53748	327 aa		0.81	□□□□□ -2.28
APL3	YBL037W	PLP1	Q04004	230 aa		0.81	□□□□□ -2.28
APL3	YBL037W	HNT1	Q04344	158 aa	Known RBP	0.81	□□□□□ -2.28
APL3	YBL037W	YLR031W	Q07978	186 aa		0.81	□□□□□ -2.28
APL3	YBL037W	MLP1	Q02455	1875 aa	Known RBP	0.81	□□□□□ -2.28
APL3	YBL037W	TRR1	P29509	319 aa	Known RBP	0.8	□□□□□ -2.28
APL3	YBL037W	IRC22	P40006	225 aa		0.8	□□□□□ -2.28
APL3	YBL037W	PRM10	P42946	383 aa		0.8	□□□□□ -2.28
APL3	YBL037W	EAF6	P47128	113 aa		0.8	□□□□□ -2.28
APL3	YBL037W	SAY1	P53324	424 aa		0.8	□□□□□ -2.28
APL3	YBL037W	COG5	P53951	403 aa		0.8	□□□□□ -2.28
APL3	YBL037W	GRX5	Q02784	150 aa		0.8	□□□□□ -2.28
APL3	YBL037W	SWP1	Q02795	286 aa		0.8	□□□□□ -2.28
APL3	YBL037W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.8	□□□□□ -2.28	not detected
APL3	YBL037W	YOL024W	Q08172	172 aa		0.8	□□□□□ -2.28
APL3	YBL037W	YNG1	Q08465	219 aa		0.8	□□□□□ -2.28
APL3	YBL037W	USB1	Q12208	290 aa	Known RBP	0.8	□□□□□ -2.28
APL3	YBL037W	JIP3	O13555	125 aa		0.8	□□□□□ -2.28
APL3	YBL037W	MBF1	O14467	151 aa	Known RBP	0.8	□□□□□ -2.28
APL3	YBL037W	MRS1	P07266	363 aa		0.8	□□□□□ -2.28
APL3	YBL037W	YKE4	P40544	346 aa		0.8	□□□□□ -2.28
APL3	YBL037W	DAD3	P69850	94 aa		0.8	□□□□□ -2.28
APL3	YBL037W	SMD2	Q06217	110 aa	Known RBP	0.8	□□□□□ -2.28
APL3	YBL037W	NOC4	Q06512	552 aa	Predicted RBP	0.8	□□□□□ -2.28
APL3	YBL037W	RIO1	Q12196	484 aa	Known RBP	0.8	□□□□□ -2.28
APL3	YBL037W	PSF1	Q12488	208 aa		0.8	□□□□□ -2.28
APL3	YBL037W	FLO1	P32768	1537 aa		0.8	□□□□□ -2.28
APL3	YBL037W	TIM9	O74700	87 aa		0.8	□□□□□ -2.28
APL3	YBL037W	CPA1	P07258	411 aa	Known RBP	0.8	□□□□□ -2.28
APL3	YBL037W	RPS24A	P0CX31	135 aa	Known RBP	0.8	□□□□□ -2.28
APL3	YBL037W	RPS24B	P0CX32	135 aa	Known RBP	0.8	□□□□□ -2.28
APL3	YBL037W	ASF2	P32448	525 aa	Predicted RBP	0.8	□□□□□ -2.28
APL3	YBL037W	YOR062C	P36025	268 aa		0.8	□□□□□ -2.28
APL3	YBL037W	PHO88	P38264	188 aa	Predicted RBP	0.8	□□□□□ -2.28
APL3	YBL037W	TVP23	P38962	199 aa		0.8	□□□□□ -2.28
APL3	YBL037W	GVP36	P40531	326 aa	Known RBP	0.8	□□□□□ -2.28
APL3	YBL037W	JAC1	P53193	184 aa		0.8	□□□□□ -2.28
APL3	YBL037W	YGR050C	P53231	118 aa		0.8	□□□□□ -2.28
APL3	YBL037W	AIM34	Q03673	198 aa		0.8	□□□□□ -2.28
APL3	YBL037W	MRPS8	Q03799	155 aa		0.8	□□□□□ -2.28
APL3	YBL037W	FAS1	P07149	2051 aa	Known RBP	0.79	□□□□□ -2.28
APL3	YBL037W	RPB3	P16370	318 aa	Known RBP	0.79	□□□□□ -2.28
APL3	YBL037W	GRX2	P17695	143 aa	Known RBP	0.79	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms