RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 OR6B2Q6IFH4 312 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 PPP1R18Q6NYC8 613 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 RFX8Q6ZV50 586 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 KIAA0825Q8IV33 1275 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 PRPF4O43172 522 aaKnown RBP eCLIP15.75■□□□□ 0.112e-8■□□□□ 10.1
UBE3A-227ENST00000638011 HIST1H2AGP0C0S8 130 aaPredicted RBP15.75■□□□□ 0.11
UBE3A-227ENST00000638011 HIST1H2ADP20671 130 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 GFPT1Q06210 699 aaPredicted RBP15.75■□□□□ 0.11
UBE3A-227ENST00000638011 KCNH2Q12809 1159 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 LRRC14Q15048 493 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 FAM180AQ6UWF9 173 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 CCNI2Q6ZMN8 369 aaPredicted RBP15.75■□□□□ 0.11
UBE3A-227ENST00000638011 HIST1H2AHQ96KK5 128 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 FAM167AQ96KS9 214 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 HIST1H2AJQ99878 128 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 H2AFJQ9BTM1 129 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 AKAP7Q9P0M2 348 aaPredicted RBP15.75■□□□□ 0.11
UBE3A-227ENST00000638011 SH3GLB1Q9Y371 365 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 APRTP07741 180 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 AMER2Q8N7J2 671 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 DDX47Q9H0S4 455 aaKnown RBP15.75■□□□□ 0.11
UBE3A-227ENST00000638011 ZBTB1Q9Y2K1 713 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 AP3B2Q13367 1082 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 EDRF1Q3B7T1 1238 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 MYCBPAPQ8TBZ2 947 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 NMD3Q96D46 503 aaKnown RBP15.75■□□□□ 0.11
UBE3A-227ENST00000638011 SP110Q9HB58 689 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 C1orf232A0A0U1RR37 186 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 SKAP2O75563 359 aaPredicted RBP15.75■□□□□ 0.11
UBE3A-227ENST00000638011 RCVRNP35243 200 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 TUBA1BP68363 451 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 MFSD14BQ5SR56 506 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 TUBA1AQ71U36 451 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 TRAPPC11Q7Z392 1133 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 HEATR4Q86WZ0 1026 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 UHRF1BP1LA0JNW5 1464 aa15.75■□□□□ 0.11
UBE3A-227ENST00000638011 PVALEFA0A1B0GWK0 134 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 AXIN1O15169 862 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 NUDT2P50583 147 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 CCNJLQ8IV13 435 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 PTPRN2Q92932 1015 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 DYRK4Q9NR20 520 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 EURLQ9NYK6 297 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 GHRP10912 638 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 CCNA2P20248 432 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 PTK7Q13308 1070 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 NEU2Q9Y3R4 380 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 CD3EAPO15446 510 aaKnown RBP15.74■□□□□ 0.11
UBE3A-227ENST00000638011 ZNF23P17027 643 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 MYL12AP19105 171 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 ACLYP53396 1101 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 POLA2Q14181 598 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 BICRALQ6AI39 1079 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 BNC2Q6ZN30 1099 aaPredicted RBP15.74■□□□□ 0.11
UBE3A-227ENST00000638011 EEF2KMTQ96G04 330 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 TMEM79Q9BSE2 394 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 DMAP1Q9NPF5 467 aaPredicted RBP15.74■□□□□ 0.11
UBE3A-227ENST00000638011 BSDC1Q9NW68 430 aaPredicted RBP15.74■□□□□ 0.11
UBE3A-227ENST00000638011 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.74■□□□□ 0.11
UBE3A-227ENST00000638011 USP17L12C9JPN9 530 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 USP17L21D6R901 530 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 KCNB1Q14721 858 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 MTHFSDQ2M296 383 aaKnown RBP15.74■□□□□ 0.11
UBE3A-227ENST00000638011 ZNF618Q5T7W0 954 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 IRGCQ6NXR0 463 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 RMND5AQ9H871 391 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 C15orf41Q9Y2V0 281 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 C3orf70A6NLC5 250 aaPredicted RBP15.74■□□□□ 0.11
UBE3A-227ENST00000638011 GEMIN4P57678 1058 aaKnown RBP15.74■□□□□ 0.11
UBE3A-227ENST00000638011 ARPC4P59998 168 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 KIAA1841Q6NSI8 718 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 KLHL24Q6TFL4 600 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 HES6Q96HZ4 224 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 MTA3Q9BTC8 594 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 C9orf16Q9BUW7 83 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 TTC7AQ9ULT0 858 aaPredicted RBP15.74■□□□□ 0.11
UBE3A-227ENST00000638011 CCNA1P78396 465 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 STX4Q12846 297 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 ZNF219Q9P2Y4 722 aaPredicted RBP15.74■□□□□ 0.11
UBE3A-227ENST00000638011 ANXA6P08133 673 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 TRAF3Q13114 568 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 TAS2R42Q7RTR8 314 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 C6orf62Q9GZU0 229 aaPredicted RBP15.74■□□□□ 0.11
UBE3A-227ENST00000638011 COMMD9Q9P000 198 aa15.74■□□□□ 0.11
UBE3A-227ENST00000638011 A0A1W2PP64 1363 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 PHF20L1A8MW92 1017 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 CDH3P22223 829 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 CENPCQ03188 943 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 GUF1Q8N442 669 aaKnown RBP15.73■□□□□ 0.11
UBE3A-227ENST00000638011 GPKOWQ92917 476 aaPredicted RBP eCLIP15.73■□□□□ 0.11
UBE3A-227ENST00000638011 MSTO1Q9BUK6 570 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 hCG_1642624A0A1W2PR95 340 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 ADCY6O43306 1168 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 CACNA2D1P54289 1103 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 ATP1A4Q13733 1029 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 ZMYM1Q5SVZ6 1142 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 CEP170P1Q96L14 293 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 GNA15P30679 374 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 DDB1Q16531 1140 aa15.73■□□□□ 0.11
UBE3A-227ENST00000638011 CDO1Q16878 200 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms