RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 DTNBO60941 627 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 CDKL5O76039 1030 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 PRAMEF12O95522 483 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 OR4Q2P0C623 313 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 XRCC6P12956 609 aaKnown RBP eCLIP9.35□□□□□ -0.91
SDF2-204ENST00000587338 GRM5P41594 1212 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 EFNA5P52803 228 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 EPHB3P54753 998 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 RING1Q06587 406 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 NR5A1Q13285 461 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 PLD1Q13393 1074 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 PPP2R5AQ15172 486 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 CACNA1EQ15878 2313 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 ITPRIPL2Q3MIP1 535 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 ZNF568Q3ZCX4 644 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 GPR158Q5T848 1215 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 NT5DC1Q5TFE4 455 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 PADI6Q6TGC4 694 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 LRSAM1Q6UWE0 723 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 TMC8Q8IU68 726 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 APPL2Q8NEU8 664 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 DDX12PQ92771 950 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 C18orf25Q96B23 403 aaPredicted RBP9.35□□□□□ -0.91
SDF2-204ENST00000587338 TMX3Q96JJ7 454 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 ZC3H10Q96K80 434 aaKnown RBP9.35□□□□□ -0.91
SDF2-204ENST00000587338 SUSD3Q96L08 255 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 ZMAT2Q96NC0 199 aaKnown RBP9.35□□□□□ -0.91
SDF2-204ENST00000587338 HHIPQ96QV1 700 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 TMEM209Q96SK2 561 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 SCNM1Q9BWG6 230 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 LRRC3Q9BY71 257 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 DUSP15Q9H1R2 295 aaPredicted RBP9.35□□□□□ -0.91
SDF2-204ENST00000587338 ATXN3LQ9H3M9 355 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 POLR3BQ9NW08 1133 aaPredicted RBP9.35□□□□□ -0.91
SDF2-204ENST00000587338 MAFFQ9ULX9 164 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 WASF3Q9UPY6 502 aa9.35□□□□□ -0.91
SDF2-204ENST00000587338 LNP1A1A4G5 178 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 DCLK1O15075 740 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 ATG13O75143 517 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 RNF40O75150 1001 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 RHOBTB1O94844 696 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 CAVIN2O95810 425 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 SPATA31C1P0DKV0 1188 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 HARSP12081 509 aaKnown RBP9.34□□□□□ -0.91
SDF2-204ENST00000587338 CYP11B2P19099 503 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 MARCKSP29966 332 aaPredicted RBP9.34□□□□□ -0.91
SDF2-204ENST00000587338 GBP1P32455 592 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 RPL9P32969 192 aaKnown RBP9.34□□□□□ -0.91
SDF2-204ENST00000587338 ALDH1A3P47895 512 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 PLCB2Q00722 1185 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 GRSF1Q12849 480 aaKnown RBP eCLIP9.34□□□□□ -0.91
SDF2-204ENST00000587338 PTPAQ15257 358 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 ARHGAP15Q53QZ3 475 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 XKR4Q5GH76 650 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 KIAA1211LQ6NV74 962 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 ALKAL1Q6UXT8 129 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 GAREM2Q75VX8 874 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 NECAB1Q8N987 351 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 BPIFB1Q8TDL5 484 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 GATA6Q92908 595 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 ZNF274Q96GC6 653 aaPredicted RBP9.34□□□□□ -0.91
SDF2-204ENST00000587338 IFT74Q96LB3 600 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 ZSCAN31Q96LW9 406 aaPredicted RBP9.34□□□□□ -0.91
SDF2-204ENST00000587338 MKNK1Q9BUB5 465 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 SMG9Q9H0W8 520 aaKnown RBP9.34□□□□□ -0.91
SDF2-204ENST00000587338 DNAJC25Q9H1X3 360 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 CDT1Q9H211 546 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 POLD4Q9HCU8 107 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 THG1LQ9NWX6 298 aaKnown RBP9.34□□□□□ -0.91
SDF2-204ENST00000587338 PCDHB8Q9UN66 801 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 TNFSF13BQ9Y275 285 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 LAMA5O15230 3695 aa9.34□□□□□ -0.91
SDF2-204ENST00000587338 HELZ2Q9BYK8 2649 aaKnown RBP9.34□□□□□ -0.91
SDF2-204ENST00000587338 ATG2BQ96BY7 2078 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 SMG1Q96Q15 3661 aaKnown RBP9.33□□□□□ -0.92
SDF2-204ENST00000587338 BCLAF3A2AJT9 711 aaKnown RBP9.33□□□□□ -0.92
SDF2-204ENST00000587338 K7ERI5 159 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 MED24O75448 989 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 SOAT2O75908 522 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 VNN2O95498 520 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 CEACAM1P13688 526 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 KCNE1P15382 129 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 GABRR2P28476 465 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 KRT2P35908 639 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 CYP4F8P98187 520 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 YWHAHQ04917 246 aaPredicted RBP9.33□□□□□ -0.92
SDF2-204ENST00000587338 DUSP4Q13115 394 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 KARSQ15046 597 aaKnown RBP9.33□□□□□ -0.92
SDF2-204ENST00000587338 UAP1L1Q3KQV9 507 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 TMEM196Q5HYL7 178 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 FSTL4Q6MZW2 842 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 CATSPER3Q86XQ3 398 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 CCDC83Q8IWF9 413 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 BEST2Q8NFU1 509 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 NACC1Q96RE7 527 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 CRISPLD1Q9H336 500 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 BRMS1Q9HCU9 246 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 TUFT1Q9NNX1 390 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 TMEM9BQ9NQ34 198 aa9.33□□□□□ -0.92
SDF2-204ENST00000587338 ASH1LQ9NR48 2969 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms