RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 TARDBPQ13148 414 aaKnown RBP eCLIP9.56□□□□□ -0.88
CDH8-207ENST00000582242 SSPNQ14714 243 aa9.56□□□□□ -0.88
CDH8-207ENST00000582242 RAB39AQ14964 217 aa9.56□□□□□ -0.88
CDH8-207ENST00000582242 SWSAP1Q6NVH7 229 aa9.56□□□□□ -0.88
CDH8-207ENST00000582242 CERS3Q8IU89 383 aa9.56□□□□□ -0.88
CDH8-207ENST00000582242 LILRA3Q8N6C8 439 aaPredicted RBP9.56□□□□□ -0.88
CDH8-207ENST00000582242 C3orf20Q8ND61 904 aa9.56□□□□□ -0.88
CDH8-207ENST00000582242 SSH3Q8TE77 659 aa9.56□□□□□ -0.88
CDH8-207ENST00000582242 ANP32BQ92688 251 aaKnown RBP9.56□□□□□ -0.88
CDH8-207ENST00000582242 KIF1BPQ96EK5 621 aa9.56□□□□□ -0.88
CDH8-207ENST00000582242 SPATA25Q9BR10 227 aa9.56□□□□□ -0.88
CDH8-207ENST00000582242 KLHL11Q9NVR0 708 aa9.56□□□□□ -0.88
CDH8-207ENST00000582242 EXOC6BQ9Y2D4 811 aa9.56□□□□□ -0.88
CDH8-207ENST00000582242 LRRFIP2Q9Y608 721 aaKnown RBP9.56□□□□□ -0.88
CDH8-207ENST00000582242 NPHP4O75161 1426 aaPredicted RBP9.56□□□□□ -0.88
CDH8-207ENST00000582242 MST1RQ04912 1400 aa9.56□□□□□ -0.88
CDH8-207ENST00000582242 ARIH2O95376 493 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 GASTP01350 101 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 PI3P19957 117 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 CSF2RBP32927 897 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 SREBF1P36956 1147 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 EIF4A1P60842 406 aaKnown RBP9.55□□□□□ -0.88
CDH8-207ENST00000582242 RAB1AP62820 205 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 MESP2Q0VG99 397 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 MORC3Q14149 939 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 CNN3Q15417 329 aaKnown RBP9.55□□□□□ -0.88
CDH8-207ENST00000582242 C1orf141Q5JVX7 400 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 RNF220Q5VTB9 566 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 AGBL4Q5VU57 503 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 MAEAQ7L5Y9 396 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 ZNF526Q8TF50 670 aaPredicted RBP9.55□□□□□ -0.88
CDH8-207ENST00000582242 SLC7A6OSQ96CW6 309 aaPredicted RBP9.55□□□□□ -0.88
CDH8-207ENST00000582242 LTV1Q96GA3 475 aaPredicted RBP9.55□□□□□ -0.88
CDH8-207ENST00000582242 CLPTM1LQ96KA5 538 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 FAM167AQ96KS9 214 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 ELAC2Q9BQ52 826 aaKnown RBP9.55□□□□□ -0.88
CDH8-207ENST00000582242 PDCD2LQ9BRP1 358 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 NAA15Q9BXJ9 866 aaKnown RBP9.55□□□□□ -0.88
CDH8-207ENST00000582242 KIAA1683Q9H0B3 1180 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 TMEM168Q9H0V1 697 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 OR10A2Q9H208 303 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 GPRC5DQ9NZD1 345 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 CALCOCO1Q9P1Z2 691 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 ADAM29Q9UKF5 820 aa9.55□□□□□ -0.88
CDH8-207ENST00000582242 PNMA6EA0A0J9YXQ4 647 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 CHMLP26374 656 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 PER3P56645 1201 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 NKX6-1P78426 367 aaPredicted RBP9.54□□□□□ -0.88
CDH8-207ENST00000582242 GPSM2P81274 684 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 USP10Q14694 798 aaKnown RBP9.54□□□□□ -0.88
CDH8-207ENST00000582242 LONRF3Q496Y0 759 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 CCDC157Q569K6 752 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 LCE4AQ5TA78 99 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 ZNF530Q6P9A1 599 aaPredicted RBP9.54□□□□□ -0.88
CDH8-207ENST00000582242 SPOCD1Q6ZMY3 1216 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 ERC1Q8IUD2 1116 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 KRT78Q8N1N4 520 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 PQLC1Q8N2U9 271 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 KLHL36Q8N4N3 616 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 PLBD2Q8NHP8 589 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 DNAAF4Q8WXU2 420 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 GCDHQ92947 438 aaPredicted RBP9.54□□□□□ -0.88
CDH8-207ENST00000582242 GJA10Q969M2 543 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 SLC38A3Q99624 504 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 USP44Q9H0E7 712 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 BARX1Q9HBU1 254 aaPredicted RBP9.54□□□□□ -0.88
CDH8-207ENST00000582242 LANCL2Q9NS86 450 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 FAM184BQ9ULE4 1060 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 PCDHGB6Q9Y5F9 930 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 DDX49Q9Y6V7 483 aaKnown RBP9.54□□□□□ -0.88
CDH8-207ENST00000582242 TTC41PQ6P2S7 1318 aa9.54□□□□□ -0.88
CDH8-207ENST00000582242 USP42Q9H9J4 1324 aaKnown RBP9.54□□□□□ -0.88
CDH8-207ENST00000582242 C9orf118A6NHY6 69 aa9.53□□□□□ -0.88
CDH8-207ENST00000582242 LRRC14BA6NHZ5 514 aa9.53□□□□□ -0.88
CDH8-207ENST00000582242 MBD3O95983 291 aa9.53□□□□□ -0.88
CDH8-207ENST00000582242 GYPEP15421 78 aa9.53□□□□□ -0.88
CDH8-207ENST00000582242 PEX2P28328 305 aa9.53□□□□□ -0.88
CDH8-207ENST00000582242 SYDE1Q6ZW31 735 aaPredicted RBP9.53□□□□□ -0.88
CDH8-207ENST00000582242 RSPH3Q86UC2 560 aa9.53□□□□□ -0.88
CDH8-207ENST00000582242 SPICE1Q8N0Z3 855 aa9.53□□□□□ -0.88
CDH8-207ENST00000582242 CNTROBQ8N137 903 aa9.53□□□□□ -0.88
CDH8-207ENST00000582242 IFI44Q8TCB0 444 aa9.53□□□□□ -0.88
CDH8-207ENST00000582242 RUFY2Q8WXA3 655 aa9.53□□□□□ -0.88
CDH8-207ENST00000582242 LRTOMTQ8WZ04 291 aa9.53□□□□□ -0.88
CDH8-207ENST00000582242 RAB24Q969Q5 203 aa9.53□□□□□ -0.88
CDH8-207ENST00000582242 RILPL2Q969X0 211 aa9.53□□□□□ -0.88
CDH8-207ENST00000582242 TRIM44Q96DX7 344 aaPredicted RBP9.53□□□□□ -0.88
CDH8-207ENST00000582242 UHRF1Q96T88 793 aaPredicted RBP9.53□□□□□ -0.88
CDH8-207ENST00000582242 ING3Q9NXR8 418 aa9.53□□□□□ -0.88
CDH8-207ENST00000582242 DBF4Q9UBU7 674 aaPredicted RBP9.53□□□□□ -0.88
CDH8-207ENST00000582242 RBM8AQ9Y5S9 174 aaKnown RBP9.53□□□□□ -0.88
CDH8-207ENST00000582242 ALS2Q96Q42 1657 aa9.52□□□□□ -0.89
CDH8-207ENST00000582242 PQBP1O60828 265 aaKnown RBP9.52□□□□□ -0.89
CDH8-207ENST00000582242 ITGA10O75578 1167 aa9.52□□□□□ -0.89
CDH8-207ENST00000582242 DDX58O95786 925 aaKnown RBP9.52□□□□□ -0.89
CDH8-207ENST00000582242 AMY1AP04745 511 aa9.52□□□□□ -0.89
CDH8-207ENST00000582242 ZNF888P0CJ79 500 aaPredicted RBP9.52□□□□□ -0.89
CDH8-207ENST00000582242 GUCY1A2P33402 732 aa9.52□□□□□ -0.89
CDH8-207ENST00000582242 TM4SF4P48230 202 aa9.52□□□□□ -0.89
CDH8-207ENST00000582242 SARSP49591 514 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms