RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 AEBP2Q6ZN18 517 aaPredicted RBP36.49■■■■□ 3.43
CDH8-207ENST00000582242 CHIC1Q5VXU3 224 aa34.74■■■■□ 3.15
CDH8-207ENST00000582242 SENP3Q9H4L4 574 aaPredicted RBP31.12■■■□□ 2.57
CDH8-207ENST00000582242 PHF23Q9BUL5 403 aaPredicted RBP30.71■■■□□ 2.51
CDH8-207ENST00000582242 FOXD1Q16676 465 aa28.98■■■□□ 2.23
CDH8-207ENST00000582242 PLPPR3Q6T4P5 718 aa27.79■■■□□ 2.04
CDH8-207ENST00000582242 PPP6R1Q9UPN7 881 aa27.16■■□□□ 1.94
CDH8-207ENST00000582242 MSH5O43196 834 aa27.11■■□□□ 1.93
CDH8-207ENST00000582242 PIAS4Q8N2W9 510 aaPredicted RBP27.1■■□□□ 1.93
CDH8-207ENST00000582242 ADRA2BP18089 450 aa27.06■■□□□ 1.92
CDH8-207ENST00000582242 POTEDQ86YR6 584 aa26.31■■□□□ 1.8
CDH8-207ENST00000582242 MAPK8IP2Q13387 824 aaPredicted RBP24.83■■□□□ 1.57
CDH8-207ENST00000582242 SCAF1Q9H7N4 1312 aaKnown RBP24.77■■□□□ 1.56
CDH8-207ENST00000582242 DMRT2Q9Y5R5 561 aa24.7■■□□□ 1.54
CDH8-207ENST00000582242 PPP4R3CPQ6ZMV5 832 aa24.36■■□□□ 1.49
CDH8-207ENST00000582242 KCNA4P22459 653 aa24.02■■□□□ 1.44
CDH8-207ENST00000582242 CNKSR2Q8WXI2 1034 aa23.9■■□□□ 1.42
CDH8-207ENST00000582242 HOXD11P31277 338 aaPredicted RBP23.83■■□□□ 1.41
CDH8-207ENST00000582242 RNF216Q9NWF9 866 aaPredicted RBP23.67■■□□□ 1.38
CDH8-207ENST00000582242 DCAF8L1A6NGE4 600 aa23.62■■□□□ 1.37
CDH8-207ENST00000582242 NCBP3Q53F19 620 aaKnown RBP23.45■■□□□ 1.34
CDH8-207ENST00000582242 EHMT2Q96KQ7 1210 aa23.2■■□□□ 1.3
CDH8-207ENST00000582242 CACNB1Q02641 598 aaPredicted RBP23.18■■□□□ 1.3
CDH8-207ENST00000582242 RNF39Q9H2S5 420 aa23.14■■□□□ 1.29
CDH8-207ENST00000582242 NPM3O75607 178 aaKnown RBP23.13■■□□□ 1.29
CDH8-207ENST00000582242 SLC4A1APQ9BWU0 796 aaKnown RBP23.02■■□□□ 1.28
CDH8-207ENST00000582242 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
CDH8-207ENST00000582242 C1QBPQ07021 282 aaKnown RBP22.8■■□□□ 1.24
CDH8-207ENST00000582242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.65■■□□□ 1.22
CDH8-207ENST00000582242 CSRNP3Q8WYN3 585 aa22.64■■□□□ 1.21
CDH8-207ENST00000582242 U3KPZ7 1027 aaPredicted RBP22.23■■□□□ 1.15
CDH8-207ENST00000582242 ZBTB22O15209 634 aa22.13■■□□□ 1.13
CDH8-207ENST00000582242 SLC4A2P04920 1241 aa22.06■■□□□ 1.12
CDH8-207ENST00000582242 FOXD4L1Q9NU39 408 aa21.91■■□□□ 1.1
CDH8-207ENST00000582242 SPINK5Q9NQ38 1064 aaPredicted RBP21.86■■□□□ 1.09
CDH8-207ENST00000582242 CAPN15O75808 1086 aa21.81■■□□□ 1.08
CDH8-207ENST00000582242 DSG3P32926 999 aa21.69■■□□□ 1.06
CDH8-207ENST00000582242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.62■■□□□ 1.05
CDH8-207ENST00000582242 APLP2Q06481 763 aa21.62■■□□□ 1.05
CDH8-207ENST00000582242 HNRNPUL2Q1KMD3 747 aaKnown RBP21.62■■□□□ 1.05
CDH8-207ENST00000582242 SAMD1Q6SPF0 538 aaPredicted RBP21.5■■□□□ 1.03
CDH8-207ENST00000582242 TRHP20396 242 aaPredicted RBP21.47■■□□□ 1.03
CDH8-207ENST00000582242 ZNF219Q9P2Y4 722 aaPredicted RBP21.47■■□□□ 1.03
CDH8-207ENST00000582242 MYCNP04198 464 aaPredicted RBP21.39■■□□□ 1.01
CDH8-207ENST00000582242 ABCB7O75027 752 aa21.31■■□□□ 1
CDH8-207ENST00000582242 ATXN8OSP0DMR3 200 aa21.11■□□□□ 0.97
CDH8-207ENST00000582242 POLA2Q14181 598 aa20.93■□□□□ 0.94
CDH8-207ENST00000582242 ATF5Q9Y2D1 282 aaPredicted RBP20.88■□□□□ 0.93
CDH8-207ENST00000582242 RBM42Q9BTD8 480 aaKnown RBP20.7■□□□□ 0.9
CDH8-207ENST00000582242 POTEHQ6S545 545 aa20.63■□□□□ 0.89
CDH8-207ENST00000582242 ZBTB12Q9Y330 459 aaPredicted RBP20.54■□□□□ 0.88
CDH8-207ENST00000582242 FKBP8Q14318 412 aa20.39■□□□□ 0.85
CDH8-207ENST00000582242 OSCARQ8IYS5 282 aa20.27■□□□□ 0.84
CDH8-207ENST00000582242 AKT1S1Q96B36 256 aa20.23■□□□□ 0.83
CDH8-207ENST00000582242 CHRDL2Q6WN34 429 aa20.2■□□□□ 0.82
CDH8-207ENST00000582242 FBLN2P98095 1184 aa20.05■□□□□ 0.8
CDH8-207ENST00000582242 REM2Q8IYK8 340 aaPredicted RBP20.04■□□□□ 0.8
CDH8-207ENST00000582242 AMER1Q5JTC6 1135 aaPredicted RBP19.99■□□□□ 0.79
CDH8-207ENST00000582242 MKRN4PQ13434 485 aaPredicted RBP19.93■□□□□ 0.78
CDH8-207ENST00000582242 RTN4Q9NQC3 1192 aaKnown RBP19.92■□□□□ 0.78
CDH8-207ENST00000582242 SPDYE2BA6NHP3 402 aa19.9■□□□□ 0.78
CDH8-207ENST00000582242 SPDYE6P0CI01 402 aa19.9■□□□□ 0.78
CDH8-207ENST00000582242 SPDYE2Q495Y8 402 aa19.9■□□□□ 0.78
CDH8-207ENST00000582242 PITPNM1O00562 1244 aa19.83■□□□□ 0.77
CDH8-207ENST00000582242 PIP4P2Q8N4L2 257 aa19.74■□□□□ 0.75
CDH8-207ENST00000582242 SSUH2Q9Y2M2 353 aa19.67■□□□□ 0.74
CDH8-207ENST00000582242 ZNF692Q9BU19 519 aaPredicted RBP19.66■□□□□ 0.74
CDH8-207ENST00000582242 SPDYE4A6NLX3 237 aa19.65■□□□□ 0.74
CDH8-207ENST00000582242 FXR2P51116 673 aaKnown RBP eCLIP19.65■□□□□ 0.74
CDH8-207ENST00000582242 SPDYE1Q8NFV5 336 aaPredicted RBP19.53■□□□□ 0.72
CDH8-207ENST00000582242 PROM2Q8N271 834 aa19.51■□□□□ 0.71
CDH8-207ENST00000582242 FBXO3Q9UK99 471 aa19.49■□□□□ 0.71
CDH8-207ENST00000582242 CLEC11AQ9Y240 323 aa19.46■□□□□ 0.71
CDH8-207ENST00000582242 SP7Q8TDD2 431 aaPredicted RBP19.38■□□□□ 0.69
CDH8-207ENST00000582242 PABPN1Q86U42 306 aaKnown RBP eCLIP19.37■□□□□ 0.69
CDH8-207ENST00000582242 HAX1O00165 279 aa19.33■□□□□ 0.68
CDH8-207ENST00000582242 PRKAR2AP13861 404 aaKnown RBP19.31■□□□□ 0.68
CDH8-207ENST00000582242 SLC24A1O60721 1099 aa19.27■□□□□ 0.68
CDH8-207ENST00000582242 VASPP50552 380 aaPredicted RBP19.2■□□□□ 0.66
CDH8-207ENST00000582242 PRR29P0C7W0 189 aa19.17■□□□□ 0.66
CDH8-207ENST00000582242 EVX2Q03828 476 aa19.12■□□□□ 0.65
CDH8-207ENST00000582242 CHADLQ6NUI6 762 aa19.1■□□□□ 0.65
CDH8-207ENST00000582242 C19orf67A6NJJ6 358 aa19.02■□□□□ 0.64
CDH8-207ENST00000582242 IFNLR1Q8IU57 520 aaPredicted RBP18.98■□□□□ 0.63
CDH8-207ENST00000582242 STAG3Q9UJ98 1225 aa18.87■□□□□ 0.61
CDH8-207ENST00000582242 FARP1Q9Y4F1 1045 aaPredicted RBP18.84■□□□□ 0.61
CDH8-207ENST00000582242 CREBZFQ9NS37 354 aa18.74■□□□□ 0.59
CDH8-207ENST00000582242 GABBR2O75899 941 aa18.7■□□□□ 0.58
CDH8-207ENST00000582242 CD44P16070 742 aaKnown RBP18.7■□□□□ 0.58
CDH8-207ENST00000582242 PKD2Q13563 968 aa18.66■□□□□ 0.58
CDH8-207ENST00000582242 SPOCK2Q92563 424 aa18.64■□□□□ 0.57
CDH8-207ENST00000582242 KLHL34Q8N239 644 aa18.62■□□□□ 0.57
CDH8-207ENST00000582242 PLCD3Q8N3E9 789 aa18.58■□□□□ 0.56
CDH8-207ENST00000582242 MIER1Q8N108 512 aa18.51■□□□□ 0.55
CDH8-207ENST00000582242 DCAF8L2P0C7V8 631 aa18.46■□□□□ 0.55
CDH8-207ENST00000582242 CLCN6P51797 869 aa18.46■□□□□ 0.55
CDH8-207ENST00000582242 MNX1P50219 401 aaPredicted RBP18.45■□□□□ 0.54
CDH8-207ENST00000582242 PLCB2Q00722 1185 aa18.45■□□□□ 0.54
CDH8-207ENST00000582242 ZNF579Q8NAF0 562 aaKnown RBP18.44■□□□□ 0.54
CDH8-207ENST00000582242 ZRANB1Q9UGI0 708 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms