RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 CXCL14O95715 111 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 ASS1P00966 412 aaKnown RBP9.2□□□□□ -0.94
NUP88-211ENST00000575976 CTSAP10619 480 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 FGFR3P22607 806 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 TPM4P67936 248 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 MRPS5P82675 430 aaKnown RBP9.2□□□□□ -0.94
NUP88-211ENST00000575976 LRMPQ12912 555 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 MYO1EQ12965 1108 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 ZNF699Q32M78 642 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 USP41Q3LFD5 358 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 RTP2Q5QGT7 225 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.2□□□□□ -0.94
NUP88-211ENST00000575976 TMC7Q7Z402 723 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 EHBP1Q8NDI1 1231 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 ANKRD20A12PQ8NF67 263 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 LMO3Q8TAP4 145 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 MICAL1Q8TDZ2 1067 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 AUTS2Q8WXX7 1259 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 ASB2Q96Q27 587 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 UHRF1Q96T88 793 aaPredicted RBP9.2□□□□□ -0.94
NUP88-211ENST00000575976 GAS2L1Q99501 681 aaPredicted RBP9.2□□□□□ -0.94
NUP88-211ENST00000575976 TCF25Q9BQ70 676 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 ANP32EQ9BTT0 268 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 LMAN2LQ9H0V9 348 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 RBSNQ9H1K0 784 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 VRTNQ9H8Y1 702 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 APOBEC3GQ9HC16 384 aaKnown RBP9.2□□□□□ -0.94
NUP88-211ENST00000575976 TLR9Q9NR96 1032 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 GDAP2Q9NXN4 497 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 NXF1Q9UBU9 619 aaKnown RBP9.2□□□□□ -0.94
NUP88-211ENST00000575976 PCDHB8Q9UN66 801 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 POLIQ9UNA4 740 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 PCDHGC5Q9Y5F6 944 aa9.2□□□□□ -0.94
NUP88-211ENST00000575976 PLXNA4Q9HCM2 1894 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 C2CD2LO14523 706 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 LILRB3O75022 631 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 CLSTN1O94985 981 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 CYP11A1P05108 521 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 URODP06132 367 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 TPM2P07951 284 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 ODC1P11926 461 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 SLC9A1P19634 815 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 CA8P35219 290 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 GLUD2P49448 558 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 TNNC1P63316 161 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 DSG1Q02413 1049 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 KCNMA1Q12791 1236 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 CETN1Q12798 172 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 MRPL58Q14197 206 aaKnown RBP9.19□□□□□ -0.94
NUP88-211ENST00000575976 ADGRE1Q14246 886 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 SOWAHAQ2M3V2 549 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 WDR72Q3MJ13 1102 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 ZNF667Q5HYK9 610 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 VARS2Q5ST30 1063 aaKnown RBP9.19□□□□□ -0.94
NUP88-211ENST00000575976 KIAA0319Q5VV43 1072 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 PLPP4Q5VZY2 271 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 WSCD1Q658N2 575 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 KIAA1841Q6NSI8 718 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 PRSS55Q6UWB4 352 aaPredicted RBP9.19□□□□□ -0.94
NUP88-211ENST00000575976 PDCL2Q8N4E4 241 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 MRPL43Q8N983 215 aaKnown RBP9.19□□□□□ -0.94
NUP88-211ENST00000575976 APPL2Q8NEU8 664 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 LNX1Q8TBB1 728 aaPredicted RBP9.19□□□□□ -0.94
NUP88-211ENST00000575976 ADAMTS19Q8TE59 1207 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 RIN2Q8WYP3 895 aaPredicted RBP9.19□□□□□ -0.94
NUP88-211ENST00000575976 PIK3R5Q8WYR1 880 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 TAF4BQ92750 862 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 TATDN2Q93075 761 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 MMS19Q96T76 1030 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 CRACR2AQ9BSW2 395 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 TTPALQ9BTX7 342 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 IMPG2Q9BZV3 1241 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 INTS2Q9H0H0 1204 aaKnown RBP9.19□□□□□ -0.94
NUP88-211ENST00000575976 SDCBP2Q9H190 292 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 ENTPD7Q9NQZ7 604 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 MRPL17Q9NRX2 175 aaKnown RBP9.19□□□□□ -0.94
NUP88-211ENST00000575976 THEGQ9P2T0 379 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 STK39Q9UEW8 545 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 L1RE1Q9UN81 338 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 SCN1AP35498 2009 aa9.19□□□□□ -0.94
NUP88-211ENST00000575976 BDP1A6H8Y1 2624 aa9.18□□□□□ -0.94
NUP88-211ENST00000575976 GTPBP10A4D1E9 387 aaKnown RBP9.18□□□□□ -0.94
NUP88-211ENST00000575976 LGALS16A8MUM7 142 aa9.18□□□□□ -0.94
NUP88-211ENST00000575976 HIDE1A8MVS5 230 aa9.18□□□□□ -0.94
NUP88-211ENST00000575976 CACNA1AO00555 2505 aa9.18□□□□□ -0.94
NUP88-211ENST00000575976 HUS1O60921 280 aa9.18□□□□□ -0.94
NUP88-211ENST00000575976 TYMPP19971 482 aa9.18□□□□□ -0.94
NUP88-211ENST00000575976 PON1P27169 355 aa9.18□□□□□ -0.94
NUP88-211ENST00000575976 RAP1GAPP47736 663 aa9.18□□□□□ -0.94
NUP88-211ENST00000575976 CDH8P55286 799 aa9.18□□□□□ -0.94
NUP88-211ENST00000575976 NOP14P78316 857 aaKnown RBP9.18□□□□□ -0.94
NUP88-211ENST00000575976 FANCCQ00597 558 aa9.18□□□□□ -0.94
NUP88-211ENST00000575976 YWHAHQ04917 246 aaPredicted RBP9.18□□□□□ -0.94
NUP88-211ENST00000575976 SMC1AQ14683 1233 aaKnown RBP9.18□□□□□ -0.94
NUP88-211ENST00000575976 PTPN14Q15678 1187 aa9.18□□□□□ -0.94
NUP88-211ENST00000575976 PTPROQ16827 1216 aa9.18□□□□□ -0.94
NUP88-211ENST00000575976 EXOC3L4Q17RC7 722 aa9.18□□□□□ -0.94
NUP88-211ENST00000575976 WDR44Q5JSH3 913 aa9.18□□□□□ -0.94
NUP88-211ENST00000575976 PDE12Q6L8Q7 609 aaKnown RBP9.18□□□□□ -0.94
NUP88-211ENST00000575976 RSPO2Q6UXX9 243 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms