RNA–Protein interactions for RNA: ENST00000573108.1

TRIM25-207, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-207ENST00000573108 LMNB2Q03252 620 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 YWHAHQ04917 246 aaPredicted RBP13.12□□□□□ -0.31
TRIM25-207ENST00000573108 GRIN1Q05586 938 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 MCL1Q07820 350 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 DMWDQ09019 674 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 SPEM2Q0P670 501 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 DUSP4Q13115 394 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 ZBTB6Q15916 424 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 WDR44Q5JSH3 913 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 ZPBP2Q6X784 338 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 MAMSTRQ6ZN01 415 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 LEMD2Q8NC56 503 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 SPRYD3Q8NCJ5 442 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 KIF12Q96FN5 646 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 CNTNAP3BQ96NU0 1288 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 TIPINQ9BVW5 301 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 CNTNAP3Q9BZ76 1288 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 RBM12Q9NTZ6 932 aaKnown RBP13.12□□□□□ -0.31
TRIM25-207ENST00000573108 GMEB2Q9UKD1 530 aa13.12□□□□□ -0.31
TRIM25-207ENST00000573108 CDV3Q9UKY7 258 aaKnown RBP13.12□□□□□ -0.31
TRIM25-207ENST00000573108 NUP210Q8TEM1 1887 aaPredicted RBP13.11□□□□□ -0.31
TRIM25-207ENST00000573108 KIF26AQ9ULI4 1882 aaPredicted RBP13.11□□□□□ -0.31
TRIM25-207ENST00000573108 TTC26A0AVF1 554 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 SLC38A8A6NNN8 435 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 PRR5-ARHGAP8B1AHC4 643 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 HOXC13P31276 330 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 MATR3P43243 847 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRIM25-207ENST00000573108 AARSP49588 968 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRIM25-207ENST00000573108 CCR3P51677 355 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 SMTNP53814 917 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 NRLP54845 237 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 ARHGAP8P85298 464 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 PTPAQ15257 358 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 HYIQ5T013 277 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 TXNDC11Q6PKC3 985 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 PRR23BQ6ZRT6 265 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 TTC9BQ8N6N2 239 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 SYT2Q8N9I0 419 aaPredicted RBP13.11□□□□□ -0.31
TRIM25-207ENST00000573108 TTC8Q8TAM2 541 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 LRRC3BQ96PB8 259 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 TMEM209Q96SK2 561 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 MKNK1Q9BUB5 465 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 SLC27A5Q9Y2P5 690 aa13.11□□□□□ -0.31
TRIM25-207ENST00000573108 MTMR11A4FU01 709 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 LACTBL1A8MY62 500 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 SOAT2O75908 522 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 CLTAP09496 248 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 PLA2G4BP0C869 781 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 SDHBP21912 280 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 CXCL12P48061 93 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 CDR1P51861 262 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 SLC12A3P55017 1021 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 NCKAP1LP55160 1127 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 CEBPZQ03701 1054 aaKnown RBP13.1□□□□□ -0.31
TRIM25-207ENST00000573108 FCHO2Q0JRZ9 810 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 SRSF5Q13243 272 aaKnown RBP13.1□□□□□ -0.31
TRIM25-207ENST00000573108 GPR17Q13304 367 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 PPP2R5DQ14738 602 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 ARSHQ5FYA8 562 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 LAIR1Q6GTX8 287 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 CENPPQ6IPU0 288 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 DSTYKQ6XUX3 929 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 Q6ZS52 159 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 GAREM2Q75VX8 874 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 YAF2Q8IY57 180 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 ATAD1Q8NBU5 361 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 CSGALNACT1Q8TDX6 532 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 BICD1Q96G01 975 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 ZFYVE19Q96K21 471 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 IER2Q9BTL4 223 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 GPR88Q9GZN0 384 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 PLEKHA5Q9HAU0 1116 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 C2orf42Q9NWW7 574 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 RAB23Q9ULC3 237 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 UBQLN1Q9UMX0 589 aaKnown RBP13.1□□□□□ -0.31
TRIM25-207ENST00000573108 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.1□□□□□ -0.31
TRIM25-207ENST00000573108 ACACBO00763 2458 aa13.1□□□□□ -0.31
TRIM25-207ENST00000573108 CHD8Q9HCK8 2581 aa13.09□□□□□ -0.31
TRIM25-207ENST00000573108 OR6C75A6NL08 312 aa13.09□□□□□ -0.31
TRIM25-207ENST00000573108 CHURC1-FNTBB4DL54 471 aa13.09□□□□□ -0.31
TRIM25-207ENST00000573108 CHADO15335 359 aa13.09□□□□□ -0.31
TRIM25-207ENST00000573108 HRO43593 1189 aa13.09□□□□□ -0.31
TRIM25-207ENST00000573108 FAM189A1O60320 539 aa13.09□□□□□ -0.31
TRIM25-207ENST00000573108 CYP3A5P20815 502 aa13.09□□□□□ -0.31
TRIM25-207ENST00000573108 FNTBP49356 437 aa13.09□□□□□ -0.31
TRIM25-207ENST00000573108 KPNA1P52294 538 aaPredicted RBP13.09□□□□□ -0.31
TRIM25-207ENST00000573108 EPHB3P54753 998 aa13.09□□□□□ -0.31
TRIM25-207ENST00000573108 PPP2R3AQ06190 1150 aa13.09□□□□□ -0.31
TRIM25-207ENST00000573108 PLD1Q13393 1074 aa13.09□□□□□ -0.31
TRIM25-207ENST00000573108 ENOX2Q16206 610 aaKnown RBP13.09□□□□□ -0.31
TRIM25-207ENST00000573108 FOXD4L5Q5VV16 416 aaPredicted RBP13.09□□□□□ -0.31
TRIM25-207ENST00000573108 OVOS1Q6IE37 1185 aa13.09□□□□□ -0.31
TRIM25-207ENST00000573108 HAUS6Q7Z4H7 955 aa13.09□□□□□ -0.31
TRIM25-207ENST00000573108 USP37Q86T82 979 aa13.09□□□□□ -0.31
TRIM25-207ENST00000573108 ARID3BQ8IVW6 561 aaPredicted RBP13.09□□□□□ -0.31
TRIM25-207ENST00000573108 CELF5Q8N6W0 485 aaKnown RBP13.09□□□□□ -0.31
TRIM25-207ENST00000573108 LRRC15Q8TF66 581 aa13.09□□□□□ -0.31
TRIM25-207ENST00000573108 FOXD4L4Q8WXT5 416 aaPredicted RBP13.09□□□□□ -0.31
TRIM25-207ENST00000573108 E2F7Q96AV8 911 aa13.09□□□□□ -0.31
TRIM25-207ENST00000573108 USP28Q96RU2 1077 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms