RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 HTATIP2Q9BUP3 242 aa5.94□□□□□ -1.46
ZEB1-220ENST00000560909 EIF2AQ9BY44 585 aaKnown RBP5.94□□□□□ -1.46
ZEB1-220ENST00000560909 IFIH1Q9BYX4 1025 aaKnown RBP5.94□□□□□ -1.46
ZEB1-220ENST00000560909 ZCCHC2Q9C0B9 1178 aaKnown RBP5.94□□□□□ -1.46
ZEB1-220ENST00000560909 ASB7Q9H672 318 aa5.94□□□□□ -1.46
ZEB1-220ENST00000560909 C1orf112Q9NSG2 853 aa5.94□□□□□ -1.46
ZEB1-220ENST00000560909 FAM105AQ9NUU6 356 aa5.94□□□□□ -1.46
ZEB1-220ENST00000560909 RNF19AQ9NV58 838 aa5.94□□□□□ -1.46
ZEB1-220ENST00000560909 ARMCX3Q9UH62 379 aaPredicted RBP5.94□□□□□ -1.46
ZEB1-220ENST00000560909 PIN4Q9Y237 131 aaKnown RBP5.94□□□□□ -1.46
ZEB1-220ENST00000560909 GINS2Q9Y248 185 aa5.94□□□□□ -1.46
ZEB1-220ENST00000560909 FRMD4BQ9Y2L6 1034 aa5.94□□□□□ -1.46
ZEB1-220ENST00000560909 DERAQ9Y315 318 aa5.94□□□□□ -1.46
ZEB1-220ENST00000560909 COQ4Q9Y3A0 265 aa5.94□□□□□ -1.46
ZEB1-220ENST00000560909 PCDHB2Q9Y5E7 798 aa5.94□□□□□ -1.46
ZEB1-220ENST00000560909 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.94□□□□□ -1.46
ZEB1-220ENST00000560909 TET1Q8NFU7 2136 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 MYH11P35749 1972 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 A0A0A0MRY4 1105 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 ABHD14A-ACY1A0A1B0GW23 586 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.93□□□□□ -1.46
ZEB1-220ENST00000560909 GTPBP10A4D1E9 387 aaKnown RBP5.93□□□□□ -1.46
ZEB1-220ENST00000560909 LGALS16A8MUM7 142 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 BECN2A8MW95 431 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 ESPNB1AK53 854 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 KCNJ18B7U540 433 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 P4HA2O15460 535 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 EFCAB14O75071 495 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 IL18RAPO95256 599 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 ALBP02768 609 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 C4BPAP04003 597 aaKnown RBP5.93□□□□□ -1.46
ZEB1-220ENST00000560909 EPB41P11171 864 aaKnown RBP5.93□□□□□ -1.46
ZEB1-220ENST00000560909 ZSCAN20P17040 1043 aaPredicted RBP5.93□□□□□ -1.46
ZEB1-220ENST00000560909 PBX1P40424 430 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 ACOT2P49753 483 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 CYP2J2P51589 502 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 AP3M2P53677 418 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 CCL23P55773 120 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 FANCCQ00597 558 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 BFSP1Q12934 665 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 KCNJ12Q14500 433 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 SURF1Q15526 300 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 MAN2A1Q16706 1144 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 ZNF568Q3ZCX4 644 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 RASIP1Q5U651 963 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 CNKSR3Q6P9H4 555 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 AGMOQ6ZNB7 445 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 TMEM192Q8IY95 271 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 RPUSD2Q8IZ73 545 aaKnown RBP5.93□□□□□ -1.46
ZEB1-220ENST00000560909 TNS4Q8IZW8 715 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 TMEM199Q8N511 208 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 CEP120Q8N960 986 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 LMO3Q8TAP4 145 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 SAAL1Q96ER3 474 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 BICD1Q96G01 975 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 EEF2KMTQ96G04 330 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 SCLYQ96I15 445 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 SNX27Q96L92 541 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 CNOT6LQ96LI5 555 aaKnown RBP5.93□□□□□ -1.46
ZEB1-220ENST00000560909 ACAP3Q96P50 834 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 ADAM2Q99965 735 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 ADPGKQ9BRR6 497 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 FAM213AQ9BRX8 229 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 TUBGCP2Q9BSJ2 902 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 TCHPQ9BT92 498 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 PCIF1Q9H4Z3 704 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 IL23AQ9NPF7 189 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 UBN1Q9NPG3 1134 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 INTS13Q9NVM9 706 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 DNAAF2Q9NVR5 837 aaKnown RBP5.93□□□□□ -1.46
ZEB1-220ENST00000560909 TMEM161AQ9NX61 479 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 CNTN3Q9P232 1028 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 GIT1Q9Y2X7 761 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 C2CD2Q9Y426 696 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 IPPQ9Y573 584 aa5.93□□□□□ -1.46
ZEB1-220ENST00000560909 TTC3P53804 2025 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 SMIM28A0A1B0GU29 152 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 A0A1W2PQC6 194 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 DCDC2BA2VCK2 349 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 GOLGA8IPA6NC78 632 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 GOLGA8JA6NMD2 632 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 LRRIQ3A6PVS8 624 aaPredicted RBP5.92□□□□□ -1.46
ZEB1-220ENST00000560909 LACTBL1A8MY62 500 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 GOLGA6L19H0YKK7 550 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 OFD1O75665 1012 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 RECQL4O94761 1208 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 BAIAP3O94812 1187 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 NPTXRO95502 500 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 STAU1O95793 577 aaKnown RBP5.92□□□□□ -1.46
ZEB1-220ENST00000560909 CSF2RAP15509 400 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 RAG1P15918 1043 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 SPINK2P20155 84 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 CYP3A5P20815 502 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 TNFSF9P41273 254 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 MRE11P49959 708 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 VAMP7P51809 220 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 COPB1P53618 953 aaKnown RBP5.92□□□□□ -1.46
ZEB1-220ENST00000560909 PPP3CAQ08209 521 aa5.92□□□□□ -1.46
ZEB1-220ENST00000560909 PPIGQ13427 754 aaKnown RBP eCLIP5.92□□□□□ -1.46
ZEB1-220ENST00000560909 IKBKEQ14164 716 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms