RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CSPG5O95196 566 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 GUCY2FP51841 1108 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 PMS1P54277 932 aaKnown RBP15.04■□□□□ -0
PKNOX1-209ENST00000560448 MARSP56192 900 aaKnown RBP15.04■□□□□ -0
PKNOX1-209ENST00000560448 ITIH3Q06033 890 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 RAB33AQ14088 237 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 STX1AQ16623 288 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 TPGS2Q68CL5 300 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 SLC22A17Q8WUG5 538 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 BORCS6Q96GS4 357 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 HPDLQ96IR7 371 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 CLSTN3Q9BQT9 956 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 IGFLR1Q9H665 355 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 CBX8Q9HC52 389 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 TMEM8AQ9HCN3 771 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 ARMCX3Q9UH62 379 aaPredicted RBP15.04■□□□□ -0
PKNOX1-209ENST00000560448 SIX4Q9UIU6 781 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 CTNND2Q9UQB3 1225 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 PCDHGC5Q9Y5F6 944 aa15.04■□□□□ -0
PKNOX1-209ENST00000560448 PTPRJQ12913 1337 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 TRIM49BA6NDI0 452 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 CYB561D2O14569 222 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 PMM2O15305 246 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 TBC1D4O60343 1298 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 HUS1O60921 280 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 PHACTR2O75167 634 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 PAPLNO95428 1278 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 C4BPAP04003 597 aaKnown RBP15.03■□□□□ -0
PKNOX1-209ENST00000560448 P4HA1P13674 534 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 MRPS5P82675 430 aaKnown RBP15.03■□□□□ -0
PKNOX1-209ENST00000560448 KRT39Q6A163 491 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 OVOS1Q6IE37 1185 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 C15orf39Q6ZRI6 1047 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 THEM5Q8N1Q8 247 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 AUTS2Q8WXX7 1259 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 IMPG2Q9BZV3 1241 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 FAM124BQ9H5Z6 455 aaPredicted RBP15.03■□□□□ -0
PKNOX1-209ENST00000560448 SFXN1Q9H9B4 322 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 SCN1AP35498 2009 aa15.03■□□□□ -0
PKNOX1-209ENST00000560448 TULP1O00294 542 aaPredicted RBP15.02■□□□□ -0
PKNOX1-209ENST00000560448 PPEF2O14830 753 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 SPTLC1O15269 473 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 GLP2RO95838 553 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 HOXA9P31269 272 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 LTBRP36941 435 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 LHX1P48742 406 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 BIRC3Q13489 604 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 NCOA4Q13772 614 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 SGSM1Q2NKQ1 1148 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 CTXN3Q4LDR2 81 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 TDRD10Q5VZ19 366 aaKnown RBP15.02■□□□□ -0
PKNOX1-209ENST00000560448 LMBRD2Q68DH5 695 aaPredicted RBP15.02■□□□□ -0
PKNOX1-209ENST00000560448 ANKRD54Q6NXT1 300 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 LILRA6Q6PI73 481 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 PRSS55Q6UWB4 352 aaPredicted RBP15.02■□□□□ -0
PKNOX1-209ENST00000560448 SV2AQ7L0J3 742 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 SMRP1Q8NCR6 262 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 CCDC150Q8NCX0 1101 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 CMASQ8NFW8 434 aaPredicted RBP15.02■□□□□ -0
PKNOX1-209ENST00000560448 ZNF461Q8TAF7 563 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 ZNF516Q92618 1163 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 MSLNLQ96KJ4 702 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 B3GALT6Q96L58 329 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 POP1Q99575 1024 aaKnown RBP15.02■□□□□ -0
PKNOX1-209ENST00000560448 DNAJC25Q9H1X3 360 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 ANO10Q9NW15 660 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 ZDHHC7Q9NXF8 308 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 HSFX1Q9UBD0 423 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 CD207Q9UJ71 328 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 FBXL5Q9UKA1 691 aa15.02■□□□□ -0
PKNOX1-209ENST00000560448 COL6A3P12111 3177 aa15.02□□□□□ -0.01
PKNOX1-209ENST00000560448 I3L4J1 428 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 P4HA2O15460 535 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 TGM5O43548 720 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 N4BP1O75113 896 aaKnown RBP15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 TBX10O75333 385 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 POU2F2P09086 479 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 KCNA5P22460 613 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 OR1D2P34982 312 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 TNNC1P63316 161 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 CETN1Q12798 172 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 SMAD4Q13485 552 aaKnown RBP15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 IQCB1Q15051 598 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 CES5AQ6NT32 575 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 CCDC149Q6ZUS6 474 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 C11orf57Q6ZUT1 292 aaPredicted RBP15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 LIMS2Q7Z4I7 341 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 FAM114A1Q8IWE2 563 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 PLEKHO2Q8TD55 490 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 C2orf15Q8WU43 125 aaKnown RBP15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 NECTIN4Q96NY8 510 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 DUSP9Q99956 384 aaKnown RBP15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 CLEC1BQ9P126 229 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 FBXW11Q9UKB1 542 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 SNX9Q9Y5X1 595 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 CDY1Q9Y6F8 540 aa15.01□□□□□ -0.01
PKNOX1-209ENST00000560448 AP5Z1O43299 807 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 TACC1O75410 805 aa15□□□□□ -0.01
PKNOX1-209ENST00000560448 ABLIM3O94929 683 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms