RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 CXCL17Q6UXB2 119 aa13.58□□□□□ -0.24
PAAF1-214ENST00000544552 RSPH3Q86UC2 560 aa13.58□□□□□ -0.24
PAAF1-214ENST00000544552 PPP1R13LQ8WUF5 828 aa13.58□□□□□ -0.24
PAAF1-214ENST00000544552 HPDLQ96IR7 371 aa13.58□□□□□ -0.24
PAAF1-214ENST00000544552 EIF2AQ9BY44 585 aaKnown RBP13.58□□□□□ -0.24
PAAF1-214ENST00000544552 LHX5Q9H2C1 402 aa13.58□□□□□ -0.24
PAAF1-214ENST00000544552 MRPL47Q9HD33 250 aaKnown RBP13.58□□□□□ -0.24
PAAF1-214ENST00000544552 SNTG2Q9NY99 539 aa13.58□□□□□ -0.24
PAAF1-214ENST00000544552 CNTN3Q9P232 1028 aa13.58□□□□□ -0.24
PAAF1-214ENST00000544552 POLIQ9UNA4 740 aa13.58□□□□□ -0.24
PAAF1-214ENST00000544552 AGAP1Q9UPQ3 857 aa13.58□□□□□ -0.24
PAAF1-214ENST00000544552 M0QZ92 97 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 PGRMC1O00264 195 aaKnown RBP13.57□□□□□ -0.24
PAAF1-214ENST00000544552 MED7O43513 233 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 CEP104O60308 925 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 CD58P19256 250 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 MMP8P22894 467 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 POLR2BP30876 1174 aaKnown RBP13.57□□□□□ -0.24
PAAF1-214ENST00000544552 SLC1A1P43005 524 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 MRPS6P82932 125 aaKnown RBP13.57□□□□□ -0.24
PAAF1-214ENST00000544552 PTP4A2Q12974 167 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 MESDQ14696 234 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 UBXN11Q5T124 520 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 CCSAPQ6IQ19 270 aaPredicted RBP13.57□□□□□ -0.24
PAAF1-214ENST00000544552 PLEKHA7Q6IQ23 1121 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 UBL4BQ8N7F7 174 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 TMEM35BQ8NCS4 154 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 CD101Q93033 1021 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 ZSWIM1Q9BR11 485 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 TRIM6Q9C030 488 aaPredicted RBP13.57□□□□□ -0.24
PAAF1-214ENST00000544552 XPNPEP3Q9NQH7 507 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 RBM12Q9NTZ6 932 aaKnown RBP13.57□□□□□ -0.24
PAAF1-214ENST00000544552 ZNF446Q9NWS9 450 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 ADAM22Q9P0K1 906 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 TRIM17Q9Y577 477 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 RALGAPA2Q2PPJ7 1873 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 CCDC66A2RUB6 948 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 CCDC188H7C350 402 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 ATMINO43313 823 aaPredicted RBP13.57□□□□□ -0.24
PAAF1-214ENST00000544552 CILPO75339 1184 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 CFHP08603 1231 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 COMTP21964 271 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 RRM1P23921 792 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 CTNNA2P26232 953 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 PEX5P50542 639 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 DNA2P51530 1060 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 RAD23BP54727 409 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 VSNL1P62760 191 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 INCA1Q0VD86 236 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 MYO1EQ12965 1108 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 TRIM32Q13049 653 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 MAP3K21Q5TCX8 1036 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 SERINC5Q86VE9 423 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 LRRC52Q8N7C0 313 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 PCSK9Q8NBP7 692 aaKnown RBP13.57□□□□□ -0.24
PAAF1-214ENST00000544552 BEST2Q8NFU1 509 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 RAET1EQ8TD07 263 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 WHAMMQ8TF30 809 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 ZMAT2Q96NC0 199 aaKnown RBP13.57□□□□□ -0.24
PAAF1-214ENST00000544552 NAP1L3Q99457 506 aaPredicted RBP13.57□□□□□ -0.24
PAAF1-214ENST00000544552 SDCBP2Q9H190 292 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 SMARCAL1Q9NZC9 954 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 EHD2Q9NZN4 543 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 LCMT1Q9UIC8 334 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 KIAA1257Q9ULG3 409 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 UBQLN1Q9UMX0 589 aaKnown RBP13.57□□□□□ -0.24
PAAF1-214ENST00000544552 PIN4Q9Y237 131 aaKnown RBP13.57□□□□□ -0.24
PAAF1-214ENST00000544552 CEP83Q9Y592 693 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 TRPV2Q9Y5S1 764 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 SCINQ9Y6U3 715 aa13.57□□□□□ -0.24
PAAF1-214ENST00000544552 TRIP11Q15643 1979 aa13.56□□□□□ -0.24
PAAF1-214ENST00000544552 XPOTO43592 962 aaKnown RBP13.56□□□□□ -0.24
PAAF1-214ENST00000544552 RECQL4O94761 1208 aa13.56□□□□□ -0.24
PAAF1-214ENST00000544552 CD4P01730 458 aa13.56□□□□□ -0.24
PAAF1-214ENST00000544552 HMGCRP04035 888 aa13.56□□□□□ -0.24
PAAF1-214ENST00000544552 CALB1P05937 261 aa13.56□□□□□ -0.24
PAAF1-214ENST00000544552 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
PAAF1-214ENST00000544552 KCNE1P15382 129 aa13.56□□□□□ -0.24
PAAF1-214ENST00000544552 CTNNA1P35221 906 aaKnown RBP13.56□□□□□ -0.24
PAAF1-214ENST00000544552 LBX1P52954 281 aa13.56□□□□□ -0.24
PAAF1-214ENST00000544552 TNNC1P63316 161 aa13.56□□□□□ -0.24
PAAF1-214ENST00000544552 GDF6Q6KF10 455 aaPredicted RBP13.56□□□□□ -0.24
PAAF1-214ENST00000544552 SCARA5Q6ZMJ2 495 aa13.56□□□□□ -0.24
PAAF1-214ENST00000544552 PXYLP1Q8TE99 480 aa13.56□□□□□ -0.24
PAAF1-214ENST00000544552 TFAP2BQ92481 460 aa13.56□□□□□ -0.24
PAAF1-214ENST00000544552 LRRC1Q9BTT6 524 aa13.56□□□□□ -0.24
PAAF1-214ENST00000544552 CHST12Q9NRB3 414 aa13.56□□□□□ -0.24
PAAF1-214ENST00000544552 BARX2Q9UMQ3 279 aaPredicted RBP13.56□□□□□ -0.24
PAAF1-214ENST00000544552 PCDHA3Q9Y5H8 950 aa13.56□□□□□ -0.24
PAAF1-214ENST00000544552 MYO1FO00160 1098 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 CABYRO75952 493 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 ASGR1P07306 291 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 VDRP11473 427 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 CYP3A5P20815 502 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 BRD2P25440 801 aaKnown RBP13.55□□□□□ -0.24
PAAF1-214ENST00000544552 CCND3P30281 292 aaPredicted RBP13.55□□□□□ -0.24
PAAF1-214ENST00000544552 CDH8P55286 799 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 MAMLD1Q13495 774 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 KCNA10Q16322 511 aa13.55□□□□□ -0.24
PAAF1-214ENST00000544552 PPP2R5EQ16537 467 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms