RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 TFDP1Q14186 410 aa11.4□□□□□ -0.58
SSPN-207ENST00000540266 DMC1Q14565 340 aa11.4□□□□□ -0.58
SSPN-207ENST00000540266 PTPAQ15257 358 aa11.4□□□□□ -0.58
SSPN-207ENST00000540266 RTN1Q16799 776 aa11.4□□□□□ -0.58
SSPN-207ENST00000540266 GAREM2Q75VX8 874 aa11.4□□□□□ -0.58
SSPN-207ENST00000540266 RASSF3Q86WH2 238 aa11.4□□□□□ -0.58
SSPN-207ENST00000540266 SYT12Q8IV01 421 aa11.4□□□□□ -0.58
SSPN-207ENST00000540266 C4orf19Q8IY42 314 aa11.4□□□□□ -0.58
SSPN-207ENST00000540266 DNAJC25Q9H1X3 360 aa11.4□□□□□ -0.58
SSPN-207ENST00000540266 HPS4Q9NQG7 708 aa11.4□□□□□ -0.58
SSPN-207ENST00000540266 J3QKU1 62 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 SYN3O14994 580 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 TBX3O15119 743 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 VNN2O95498 520 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 PRAMEF12O95522 483 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 P4HBP07237 508 aaKnown RBP11.39□□□□□ -0.59
SSPN-207ENST00000540266 DRD1P21728 446 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 CHMLP26374 656 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 CDC27P30260 824 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 DHPSP49366 369 aaPredicted RBP11.39□□□□□ -0.59
SSPN-207ENST00000540266 DGKEP52429 567 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 PPP2R5CQ13362 524 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 RUNX3Q13761 415 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 TRIP6Q15654 476 aaKnown RBP11.39□□□□□ -0.59
SSPN-207ENST00000540266 FBXO43Q4G163 708 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 PEAR1Q5VY43 1037 aaPredicted RBP11.39□□□□□ -0.59
SSPN-207ENST00000540266 SYNE3Q6ZMZ3 975 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 SCUBE3Q8IX30 993 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 PNPLA1Q8N8W4 532 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 BEST2Q8NFU1 509 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 RPLP0P6Q8NHW5 317 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 OLIG1Q8TAK6 271 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 BPIFB1Q8TDL5 484 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 FNBP1Q96RU3 617 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 MTRQ99707 1265 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 HNRNPABQ99729 332 aaKnown RBP11.39□□□□□ -0.59
SSPN-207ENST00000540266 GKN1Q9NS71 199 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 DACH1Q9UI36 760 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 PILRBQ9UKJ0 227 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 VAV3Q9UKW4 847 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 RBM8AQ9Y5S9 174 aaKnown RBP11.39□□□□□ -0.59
SSPN-207ENST00000540266 VWA8A3KMH1 1905 aa11.39□□□□□ -0.59
SSPN-207ENST00000540266 H7C4K7 107 aa11.38□□□□□ -0.59
SSPN-207ENST00000540266 SGSM2O43147 1006 aa11.38□□□□□ -0.59
SSPN-207ENST00000540266 DKC1O60832 514 aaKnown RBP eCLIP11.38□□□□□ -0.59
SSPN-207ENST00000540266 FTH1P19P0C7X4 201 aa11.38□□□□□ -0.59
SSPN-207ENST00000540266 GLRA2P23416 452 aa11.38□□□□□ -0.59
SSPN-207ENST00000540266 PTGER3P43115 390 aa11.38□□□□□ -0.59
SSPN-207ENST00000540266 NAIF1Q69YI7 327 aaPredicted RBP11.38□□□□□ -0.59
SSPN-207ENST00000540266 HDDC3Q8N4P3 179 aa11.38□□□□□ -0.59
SSPN-207ENST00000540266 CCDC12Q8WUD4 166 aaPredicted RBP11.38□□□□□ -0.59
SSPN-207ENST00000540266 CNOT6LQ96LI5 555 aaKnown RBP11.38□□□□□ -0.59
SSPN-207ENST00000540266 UROC1Q96N76 676 aa11.38□□□□□ -0.59
SSPN-207ENST00000540266 CAMK1GQ96NX5 476 aa11.38□□□□□ -0.59
SSPN-207ENST00000540266 FZD8Q9H461 694 aa11.38□□□□□ -0.59
SSPN-207ENST00000540266 PDZD7Q9H5P4 517 aa11.38□□□□□ -0.59
SSPN-207ENST00000540266 TBX20Q9UMR3 447 aa11.38□□□□□ -0.59
SSPN-207ENST00000540266 ABCA7Q8IZY2 2146 aa11.38□□□□□ -0.59
SSPN-207ENST00000540266 EML5Q05BV3 1969 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 TDP2O95551 362 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 HOXD12P35452 270 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 MCM2P49736 904 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 SOX4Q06945 474 aaPredicted RBP11.37□□□□□ -0.59
SSPN-207ENST00000540266 DSG2Q14126 1118 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 FAM187BQ17R55 369 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 SPDYCQ5MJ68 293 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 RNF19BQ6ZMZ0 732 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 OTUD6AQ7L8S5 288 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 SLCO6A1Q86UG4 719 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 NOSTRINQ8IVI9 506 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 BICD2Q8TD16 824 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 TBCKQ8TEA7 893 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 RUFY2Q8WXA3 655 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 PRIMPOLQ96LW4 560 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 POLR3CQ9BUI4 534 aaPredicted RBP11.37□□□□□ -0.59
SSPN-207ENST00000540266 TPSD1Q9BZJ3 242 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 CRISPLD1Q9H336 500 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 PRORYQ9H606 182 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 GOLGA2P5Q9HBQ8 144 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 CAPN10Q9HC96 672 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 POLMQ9NP87 494 aaPredicted RBP11.37□□□□□ -0.59
SSPN-207ENST00000540266 FSCN3Q9NQT6 498 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 DNAAF2Q9NVR5 837 aaKnown RBP11.37□□□□□ -0.59
SSPN-207ENST00000540266 THG1LQ9NWX6 298 aaKnown RBP11.37□□□□□ -0.59
SSPN-207ENST00000540266 FARP1Q9Y4F1 1045 aaPredicted RBP11.37□□□□□ -0.59
SSPN-207ENST00000540266 YIPF1Q9Y548 306 aa11.37□□□□□ -0.59
SSPN-207ENST00000540266 TDRD15B5MCY1 1934 aaKnown RBP11.37□□□□□ -0.59
SSPN-207ENST00000540266 ARHGAP6O43182 974 aa11.36□□□□□ -0.59
SSPN-207ENST00000540266 ZBTB43O43298 467 aa11.36□□□□□ -0.59
SSPN-207ENST00000540266 OPHN1O60890 802 aa11.36□□□□□ -0.59
SSPN-207ENST00000540266 GJB3O75712 270 aa11.36□□□□□ -0.59
SSPN-207ENST00000540266 GSPT1P15170 499 aaKnown RBP11.36□□□□□ -0.59
SSPN-207ENST00000540266 ADD1P35611 737 aaKnown RBP11.36□□□□□ -0.59
SSPN-207ENST00000540266 EXOSC10Q01780 885 aaKnown RBP11.36□□□□□ -0.59
SSPN-207ENST00000540266 SRSF1Q07955 248 aaKnown RBP eCLIP11.36□□□□□ -0.59
SSPN-207ENST00000540266 SLC14A1Q13336 389 aa11.36□□□□□ -0.59
SSPN-207ENST00000540266 CTXN3Q4LDR2 81 aa11.36□□□□□ -0.59
SSPN-207ENST00000540266 XKR9Q5GH70 373 aa11.36□□□□□ -0.59
SSPN-207ENST00000540266 GLRA4Q5JXX5 417 aa11.36□□□□□ -0.59
SSPN-207ENST00000540266 GPR158Q5T848 1215 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms