RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 PLEKHA4Q9H4M7 779 aa24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 SFXN1Q9H9B4 322 aa24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 FBXW11Q9UKB1 542 aa24.48■■□□□ 1.51
SFSWAP-204ENST00000535399 SCN1AP35498 2009 aa24.47■■□□□ 1.51
SFSWAP-204ENST00000535399 ARHGEF37A1IGU5 675 aa24.47■■□□□ 1.51
SFSWAP-204ENST00000535399 CETN3O15182 167 aa24.47■■□□□ 1.51
SFSWAP-204ENST00000535399 CST3P01034 146 aaPredicted RBP24.47■■□□□ 1.51
SFSWAP-204ENST00000535399 ROR1Q01973 937 aa24.47■■□□□ 1.51
SFSWAP-204ENST00000535399 WSCD1Q658N2 575 aa24.47■■□□□ 1.51
SFSWAP-204ENST00000535399 OVOS1Q6IE37 1185 aa24.47■■□□□ 1.51
SFSWAP-204ENST00000535399 MKNK1Q9BUB5 465 aa24.47■■□□□ 1.51
SFSWAP-204ENST00000535399 NUP62CLQ9H1M0 184 aa24.47■■□□□ 1.51
SFSWAP-204ENST00000535399 GDAP2Q9NXN4 497 aa24.47■■□□□ 1.51
SFSWAP-204ENST00000535399 DPP7Q9UHL4 492 aa24.47■■□□□ 1.51
SFSWAP-204ENST00000535399 FAM50BQ9Y247 325 aa24.47■■□□□ 1.51
SFSWAP-204ENST00000535399 C4BPAP04003 597 aaKnown RBP24.46■■□□□ 1.51
SFSWAP-204ENST00000535399 VAMP7P51809 220 aa24.46■■□□□ 1.51
SFSWAP-204ENST00000535399 AP3M2P53677 418 aa24.46■■□□□ 1.51
SFSWAP-204ENST00000535399 MCCD1P59942 119 aaPredicted RBP24.46■■□□□ 1.51
SFSWAP-204ENST00000535399 FKBP3Q00688 224 aaKnown RBP24.46■■□□□ 1.51
SFSWAP-204ENST00000535399 ITIH3Q06033 890 aa24.46■■□□□ 1.51
SFSWAP-204ENST00000535399 ENPEPQ07075 957 aa24.46■■□□□ 1.51
SFSWAP-204ENST00000535399 TDRD10Q5VZ19 366 aaKnown RBP24.46■■□□□ 1.51
SFSWAP-204ENST00000535399 KLHL10Q6JEL2 608 aa24.46■■□□□ 1.51
SFSWAP-204ENST00000535399 INTS8Q75QN2 995 aaKnown RBP24.46■■□□□ 1.51
SFSWAP-204ENST00000535399 CMASQ8NFW8 434 aaPredicted RBP24.46■■□□□ 1.51
SFSWAP-204ENST00000535399 HPDLQ96IR7 371 aa24.46■■□□□ 1.51
SFSWAP-204ENST00000535399 CDH22Q9UJ99 828 aa24.46■■□□□ 1.51
SFSWAP-204ENST00000535399 DSEQ9UL01 958 aa24.46■■□□□ 1.51
SFSWAP-204ENST00000535399 WDR27A2RRH5 827 aa24.45■■□□□ 1.5
SFSWAP-204ENST00000535399 OR6C75A6NL08 312 aa24.45■■□□□ 1.5
SFSWAP-204ENST00000535399 ABLIM3O94929 683 aa24.45■■□□□ 1.5
SFSWAP-204ENST00000535399 PAPLNO95428 1278 aa24.45■■□□□ 1.5
SFSWAP-204ENST00000535399 ARPP19P56211 112 aa24.45■■□□□ 1.5
SFSWAP-204ENST00000535399 TTI2Q6NXR4 508 aa24.45■■□□□ 1.5
SFSWAP-204ENST00000535399 ELMSAN1Q6PJG2 1045 aa24.45■■□□□ 1.5
SFSWAP-204ENST00000535399 TMC5Q6UXY8 1006 aa24.45■■□□□ 1.5
SFSWAP-204ENST00000535399 ADAMTS19Q8TE59 1207 aa24.45■■□□□ 1.5
SFSWAP-204ENST00000535399 NELFBQ8WX92 580 aa24.45■■□□□ 1.5
SFSWAP-204ENST00000535399 DUSP9Q99956 384 aaKnown RBP24.45■■□□□ 1.5
SFSWAP-204ENST00000535399 RTP3Q9BQQ7 232 aa24.45■■□□□ 1.5
SFSWAP-204ENST00000535399 OXCT2Q9BYC2 517 aaPredicted RBP24.45■■□□□ 1.5
SFSWAP-204ENST00000535399 R3HCC1Q9Y3T6 440 aaKnown RBP24.45■■□□□ 1.5
SFSWAP-204ENST00000535399 TTC28Q96AY4 2481 aa24.45■■□□□ 1.5
SFSWAP-204ENST00000535399 IKBKBO14920 756 aa24.44■■□□□ 1.5
SFSWAP-204ENST00000535399 RFPL2O75678 378 aa24.44■■□□□ 1.5
SFSWAP-204ENST00000535399 MYO1EQ12965 1108 aa24.44■■□□□ 1.5
SFSWAP-204ENST00000535399 CES5AQ6NT32 575 aa24.44■■□□□ 1.5
SFSWAP-204ENST00000535399 FOXR2Q6PJQ5 311 aa24.44■■□□□ 1.5
SFSWAP-204ENST00000535399 PDCL2Q8N4E4 241 aa24.44■■□□□ 1.5
SFSWAP-204ENST00000535399 ZNF461Q8TAF7 563 aa24.44■■□□□ 1.5
SFSWAP-204ENST00000535399 L1RE1Q9UN81 338 aa24.44■■□□□ 1.5
SFSWAP-204ENST00000535399 CTNND2Q9UQB3 1225 aa24.44■■□□□ 1.5
SFSWAP-204ENST00000535399 SNX9Q9Y5X1 595 aa24.44■■□□□ 1.5
SFSWAP-204ENST00000535399 PLXNA3P51805 1871 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 SPDYE4A6NLX3 237 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 SLC16A3O15427 465 aaKnown RBP24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 ZMYND10O75800 440 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 WEE2P0C1S8 567 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 TRIM49P0CI25 452 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 TRIM49CP0CI26 452 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 EPB41P11171 864 aaKnown RBP24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 KRT13P13646 458 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 ZACNQ401N2 412 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 SV2AQ7L0J3 742 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 LIMS2Q7Z4I7 341 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 GPR149Q86SP6 731 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 METTL23Q86XA0 190 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 TOP6BLQ8N6T0 577 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 OR10T2Q8NGX3 314 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 ZNF707Q96C28 371 aaPredicted RBP24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 NECAB3Q96P71 396 aaPredicted RBP24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 TMEM209Q96SK2 561 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 XYLT2Q9H1B5 865 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 ZDHHC7Q9NXF8 308 aa24.43■■□□□ 1.5
SFSWAP-204ENST00000535399 CCDC195A0A1B0GUA6 201 aa24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 HUS1O60921 280 aa24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 PHACTR2O75167 634 aa24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 VNN1O95497 513 aa24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 STAU1O95793 577 aaKnown RBP24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 C8AP07357 584 aa24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 OR4Q2P0C623 313 aa24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 MYL6P60660 151 aa24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 PPP3CAQ08209 521 aa24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 PAK1Q13153 545 aa24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 BIRC3Q13489 604 aa24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 TRPC3Q13507 836 aa24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 CBX2Q14781 532 aaPredicted RBP24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 LIN9Q5TKA1 542 aa24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 TPGS2Q68CL5 300 aa24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 C15orf39Q6ZRI6 1047 aa24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 RHOBTB2Q9BYZ6 727 aa24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 AFF4Q9UHB7 1163 aaKnown RBP24.42■■□□□ 1.5
SFSWAP-204ENST00000535399 ATF2P15336 505 aa24.41■■□□□ 1.5
SFSWAP-204ENST00000535399 ATICP31939 592 aa24.41■■□□□ 1.5
SFSWAP-204ENST00000535399 MTHFRP42898 656 aa24.41■■□□□ 1.5
SFSWAP-204ENST00000535399 STX17P56962 302 aa24.41■■□□□ 1.5
SFSWAP-204ENST00000535399 NCOA4Q13772 614 aa24.41■■□□□ 1.5
SFSWAP-204ENST00000535399 SOWAHAQ2M3V2 549 aa24.41■■□□□ 1.5
SFSWAP-204ENST00000535399 RNF19BQ6ZMZ0 732 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms