RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 ATICP31939 592 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 CYP27A1Q02318 531 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 GFPT1Q06210 699 aaPredicted RBP16.11■□□□□ 0.17
SREK1-209ENST00000520953 GRIK3Q13003 919 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 IKBKEQ14164 716 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 ASTE1Q2TB18 679 aaPredicted RBP16.11■□□□□ 0.17
SREK1-209ENST00000520953 TAF3Q5VWG9 929 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 CD300LGQ6UXG3 332 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 SYT10Q6XYQ8 523 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 NOP9Q86U38 636 aaKnown RBP16.11■□□□□ 0.17
SREK1-209ENST00000520953 MMS19Q96T76 1030 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 MRPL45Q9BRJ2 306 aaKnown RBP16.11■□□□□ 0.17
SREK1-209ENST00000520953 COL4A6Q14031 1691 aa16.11■□□□□ 0.17
SREK1-209ENST00000520953 CCDC85CA6NKD9 419 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 INPPL1O15357 1258 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 CFHP08603 1231 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 RFC2P35250 354 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 LILRA4P59901 499 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 UPP1Q16831 310 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 TMEM199Q8N511 208 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 LRRC52Q8N7C0 313 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 TAF4BQ92750 862 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 NUCKS1Q9H1E3 243 aaKnown RBP16.1■□□□□ 0.17
SREK1-209ENST00000520953 UBN1Q9NPG3 1134 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 SLC38A7Q9NVC3 462 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 LRFN2Q9ULH4 789 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 PTPRSQ13332 1948 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 ZSCAN12O43309 604 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 XPOTO43592 962 aaKnown RBP16.1■□□□□ 0.17
SREK1-209ENST00000520953 FERP16591 822 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 TBXAS1P24557 533 aaPredicted RBP16.1■□□□□ 0.17
SREK1-209ENST00000520953 PBX3P40426 434 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 PRKCIP41743 596 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 CDR1P51861 262 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 CDK17Q00537 523 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 RBBP8NLQ8NC74 664 aaPredicted RBP16.1■□□□□ 0.17
SREK1-209ENST00000520953 LNX1Q8TBB1 728 aaPredicted RBP16.1■□□□□ 0.17
SREK1-209ENST00000520953 WHAMMQ8TF30 809 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 ZSWIM1Q9BR11 485 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 SYT11Q9BT88 431 aa16.1■□□□□ 0.17
SREK1-209ENST00000520953 ELAC1Q9H777 363 aaKnown RBP16.1■□□□□ 0.17
SREK1-209ENST00000520953 NOCTQ9UK39 431 aaKnown RBP16.1■□□□□ 0.17
SREK1-209ENST00000520953 EPN1Q9Y6I3 576 aaPredicted RBP16.1■□□□□ 0.17
SREK1-209ENST00000520953 FNDC1Q4ZHG4 1894 aaPredicted RBP16.09■□□□□ 0.17
SREK1-209ENST00000520953 A0A087X0T9 212 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 KPNA7A9QM74 516 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 STAU1O95793 577 aaKnown RBP16.09■□□□□ 0.17
SREK1-209ENST00000520953 FAM228BP0C875 321 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 CHRNB2P17787 502 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 KIF11P52732 1056 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 TNNC1P63316 161 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 MYO1EQ12965 1108 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 TUSC3Q13454 348 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 SOWAHAQ2M3V2 549 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 ENOSF1Q7L5Y1 443 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 EPS8L1Q8TE68 723 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 TSPAN18Q96SJ8 248 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 LPIN3Q9BQK8 851 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 ADAMTS1Q9UHI8 967 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 TBKBP1A7MCY6 615 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 RRP9O43818 475 aaKnown RBP16.09■□□□□ 0.17
SREK1-209ENST00000520953 KIF4AO95239 1232 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 NDUFA10O95299 355 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 ABL1P00519 1130 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 TUBB4AP04350 444 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 CYP11B1P15538 503 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 BRCC3P46736 316 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 TAF6P49848 677 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 ZNF132P52740 706 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 WDR5P61964 334 aaKnown RBP16.09■□□□□ 0.17
SREK1-209ENST00000520953 ETF1P62495 437 aaKnown RBP16.09■□□□□ 0.17
SREK1-209ENST00000520953 GLYCTKQ8IVS8 523 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 CCDC42Q96M95 316 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.09■□□□□ 0.17
SREK1-209ENST00000520953 ELOVL4Q9GZR5 314 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 IL23AQ9NPF7 189 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 PRKAG2Q9UGJ0 569 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 L1RE1Q9UN81 338 aa16.09■□□□□ 0.17
SREK1-209ENST00000520953 TIMM13Q9Y5L4 95 aaPredicted RBP16.09■□□□□ 0.17
SREK1-209ENST00000520953 DDX3XO00571 662 aaKnown RBP eCLIP16.08■□□□□ 0.165e-11■■□□□ 12.6
SREK1-209ENST00000520953 DSC1Q08554 894 aa16.08■□□□□ 0.16
SREK1-209ENST00000520953 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.16
SREK1-209ENST00000520953 CCDC142Q17RM4 750 aa16.08■□□□□ 0.16
SREK1-209ENST00000520953 ZNF365Q70YC5 407 aa16.08■□□□□ 0.16
SREK1-209ENST00000520953 NPAS4Q8IUM7 802 aa16.08■□□□□ 0.16
SREK1-209ENST00000520953 COLGALT2Q8IYK4 626 aa16.08■□□□□ 0.16
SREK1-209ENST00000520953 ABI1Q8IZP0 508 aa16.08■□□□□ 0.16
SREK1-209ENST00000520953 KBTBD7Q8WVZ9 684 aa16.08■□□□□ 0.16
SREK1-209ENST00000520953 DDX1Q92499 740 aaKnown RBP16.08■□□□□ 0.16
SREK1-209ENST00000520953 PCDHB18PQ96TA0 734 aa16.08■□□□□ 0.16
SREK1-209ENST00000520953 CXXC1Q9P0U4 656 aaPredicted RBP16.08■□□□□ 0.16
SREK1-209ENST00000520953 CNTN6Q9UQ52 1028 aa16.08■□□□□ 0.16
SREK1-209ENST00000520953 PRG3Q9Y2Y8 225 aaPredicted RBP16.08■□□□□ 0.16
SREK1-209ENST00000520953 DAAM1Q9Y4D1 1078 aa16.08■□□□□ 0.16
SREK1-209ENST00000520953 ADGRG1Q9Y653 693 aa16.08■□□□□ 0.16
SREK1-209ENST00000520953 FANCGO15287 622 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 B3GAT3O94766 335 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 MMEP08473 750 aa16.07■□□□□ 0.16
SREK1-209ENST00000520953 RNASELQ05823 741 aaKnown RBP16.07■□□□□ 0.16
SREK1-209ENST00000520953 TIGD5Q53EQ6 642 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms