RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 FRMD4BQ9Y2L6 1034 aa19.66■□□□□ 0.74
PDLIM7-216ENST00000506537 WDR27A2RRH5 827 aa19.65■□□□□ 0.74
PDLIM7-216ENST00000506537 MAPK13O15264 365 aa19.65■□□□□ 0.74
PDLIM7-216ENST00000506537 BFSP1Q12934 665 aa19.65■□□□□ 0.74
PDLIM7-216ENST00000506537 ADAM9Q13443 819 aa19.65■□□□□ 0.74
PDLIM7-216ENST00000506537 ANKRD40Q6AI12 368 aa19.65■□□□□ 0.74
PDLIM7-216ENST00000506537 OVOS1Q6IE37 1185 aa19.65■□□□□ 0.74
PDLIM7-216ENST00000506537 GPT2Q8TD30 523 aa19.65■□□□□ 0.74
PDLIM7-216ENST00000506537 HDAC7Q8WUI4 952 aa19.65■□□□□ 0.74
PDLIM7-216ENST00000506537 RTP3Q9BQQ7 232 aa19.65■□□□□ 0.74
PDLIM7-216ENST00000506537 PLEKHA4Q9H4M7 779 aa19.65■□□□□ 0.74
PDLIM7-216ENST00000506537 BDP1A6H8Y1 2624 aa19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 ABLIM3O94929 683 aa19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 PAPLNO95428 1278 aa19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 CST3P01034 146 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 CCNE1P24864 410 aa19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 RPL13P26373 211 aaKnown RBP19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 ARPP19P56211 112 aa19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 ITIH3Q06033 890 aa19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 TDRD10Q5VZ19 366 aaKnown RBP19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 WSCD1Q658N2 575 aa19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 USP37Q86T82 979 aa19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 FAM186BQ8IYM0 893 aa19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 CMASQ8NFW8 434 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 TMC2Q8TDI7 906 aa19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 ZNF707Q96C28 371 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 TMEM209Q96SK2 561 aa19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 UHRF1Q96T88 793 aaPredicted RBP19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 GDAP2Q9NXN4 497 aa19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 L1RE1Q9UN81 338 aa19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 FAM50BQ9Y247 325 aa19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 DENND4AQ7Z401 1863 aa19.64■□□□□ 0.73
PDLIM7-216ENST00000506537 SPDYE4A6NLX3 237 aa19.63■□□□□ 0.73
PDLIM7-216ENST00000506537 PSMA7O14818 248 aa19.63■□□□□ 0.73
PDLIM7-216ENST00000506537 C4BPAP04003 597 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-216ENST00000506537 OR4Q2P0C623 313 aa19.63■□□□□ 0.73
PDLIM7-216ENST00000506537 PSMC2P35998 433 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-216ENST00000506537 ZP2Q05996 745 aa19.63■□□□□ 0.73
PDLIM7-216ENST00000506537 CBX2Q14781 532 aaPredicted RBP19.63■□□□□ 0.73
PDLIM7-216ENST00000506537 KLHL10Q6JEL2 608 aa19.63■□□□□ 0.73
PDLIM7-216ENST00000506537 GPR149Q86SP6 731 aa19.63■□□□□ 0.73
PDLIM7-216ENST00000506537 PDCL2Q8N4E4 241 aa19.63■□□□□ 0.73
PDLIM7-216ENST00000506537 OR10T2Q8NGX3 314 aa19.63■□□□□ 0.73
PDLIM7-216ENST00000506537 ZNF461Q8TAF7 563 aa19.63■□□□□ 0.73
PDLIM7-216ENST00000506537 DHTKD1Q96HY7 919 aaPredicted RBP19.63■□□□□ 0.73
PDLIM7-216ENST00000506537 HPDLQ96IR7 371 aa19.63■□□□□ 0.73
PDLIM7-216ENST00000506537 DPP7Q9UHL4 492 aa19.63■□□□□ 0.73
PDLIM7-216ENST00000506537 DSEQ9UL01 958 aa19.63■□□□□ 0.73
PDLIM7-216ENST00000506537 CCDC195A0A1B0GUA6 201 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 ZMYND10O75800 440 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 VNN1O95497 513 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 VNN2O95498 520 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 C8AP07357 584 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 TRIM49P0CI25 452 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 TRIM49CP0CI26 452 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 VAMP7P51809 220 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 MCCD1P59942 119 aaPredicted RBP19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 LRRC63Q05C16 580 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 STIM1Q13586 685 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 CES5AQ6NT32 575 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 TTI2Q6NXR4 508 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 INTS8Q75QN2 995 aaKnown RBP19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 LIMS2Q7Z4I7 341 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 TRIML1Q8N9V2 468 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 SLC7A14Q8TBB6 771 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 TSG101Q99816 390 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 DUSP9Q99956 384 aaKnown RBP19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 MKNK1Q9BUB5 465 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 XYLT2Q9H1B5 865 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 NUP62CLQ9H1M0 184 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 POMKQ9H5K3 350 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 ZDHHC7Q9NXF8 308 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 CTNND2Q9UQB3 1225 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 SNX9Q9Y5X1 595 aa19.62■□□□□ 0.73
PDLIM7-216ENST00000506537 ARHGEF37A1IGU5 675 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 OR6C75A6NL08 312 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 CETN3O15182 167 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 SEC24AO95486 1093 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 CPB1P15086 417 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 PPP1R2P41236 205 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 MYL6P60660 151 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 MYO1EQ12965 1108 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 ZACNQ401N2 412 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 LIN9Q5TKA1 542 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 ELMSAN1Q6PJG2 1045 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 RNF19BQ6ZMZ0 732 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 C15orf39Q6ZRI6 1047 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 OSTM1Q86WC4 334 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 ADHFE1Q8IWW8 467 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 NELFBQ8WX92 580 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 OXCT2Q9BYC2 517 aaPredicted RBP19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 CD320Q9NPF0 282 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 PRKAG3Q9UGI9 489 aa19.61■□□□□ 0.73
PDLIM7-216ENST00000506537 NCOR1O75376 2440 aa19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 SLC16A3O15427 465 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 ATF2P15336 505 aa19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 COL9A1P20849 921 aa19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 MTHFRP42898 656 aa19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 AP3M2P53677 418 aa19.6■□□□□ 0.73
PDLIM7-216ENST00000506537 FKBP3Q00688 224 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms