RNA–Protein interactions for RNA: ENST00000504230.2

LINC00958-201, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,558 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-201ENST00000504230 ZNF667Q5HYK9 610 aa11.73□□□□□ -0.53
LINC00958-201ENST00000504230 ZNF558Q96NG5 402 aa11.73□□□□□ -0.53
LINC00958-201ENST00000504230 NT5C1BQ96P26 610 aa11.73□□□□□ -0.53
LINC00958-201ENST00000504230 ERGIC2Q96RQ1 377 aa11.73□□□□□ -0.53
LINC00958-201ENST00000504230 INTS2Q9H0H0 1204 aaKnown RBP11.73□□□□□ -0.53
LINC00958-201ENST00000504230 PRG3Q9Y2Y8 225 aaPredicted RBP11.73□□□□□ -0.53
LINC00958-201ENST00000504230 RWDD3Q9Y3V2 267 aa11.73□□□□□ -0.53
LINC00958-201ENST00000504230 PCDHA11Q9Y5I1 949 aa11.73□□□□□ -0.53
LINC00958-201ENST00000504230 MRPL42Q9Y6G3 142 aaKnown RBP11.73□□□□□ -0.53
LINC00958-201ENST00000504230 ARHGEF37A1IGU5 675 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 GRXCR1A8MXD5 290 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 TMEM189-UBE2V1I3L0A0 370 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 PPEF2O14830 753 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 TRAPPC3O43617 180 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 B4GALT3O60512 393 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 ASS1P00966 412 aaKnown RBP11.72□□□□□ -0.53
LINC00958-201ENST00000504230 SLC9A1P19634 815 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 RABGGTBP53611 331 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 SYCP1Q15431 976 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 RAB30Q15771 203 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 WDR72Q3MJ13 1102 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 KCNT2Q6UVM3 1135 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 RABGGTAQ92696 567 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 SEMA4DQ92854 862 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 FAXDC2Q96IV6 333 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 FAM81BQ96LP2 452 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 PAAF1Q9BRP4 392 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 VRTNQ9H8Y1 702 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 CACNG4Q9UBN1 327 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 MSRAQ9UJ68 235 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 PCDHB12Q9Y5F1 795 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 COL4A6Q14031 1691 aa11.72□□□□□ -0.53
LINC00958-201ENST00000504230 KPNA7A9QM74 516 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 RNF223E7ERA6 249 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 AP5Z1O43299 807 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 KIF4AO95239 1232 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 PON1P27169 355 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 PPM1AP35813 382 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 ZNF75DP51815 510 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 LILRA4P59901 499 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 TNNC1P63316 161 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 NOP14P78316 857 aaKnown RBP11.71□□□□□ -0.53
LINC00958-201ENST00000504230 KCNMA1Q12791 1236 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 LRMPQ12912 555 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 FAM109BQ6ICB4 259 aaPredicted RBP11.71□□□□□ -0.53
LINC00958-201ENST00000504230 TRIM65Q6PJ69 517 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 DSTYKQ6XUX3 929 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 TMEM130Q8N3G9 435 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 COLGALT1Q8NBJ5 622 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 NEK11Q8NG66 645 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 LMO3Q8TAP4 145 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 CLP1Q92989 425 aaKnown RBP11.71□□□□□ -0.53
LINC00958-201ENST00000504230 TMEM169Q96HH4 297 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 MRFAP1L1Q96HT8 127 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 PI4K2AQ9BTU6 479 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 LSM14BQ9BX40 385 aaKnown RBP11.71□□□□□ -0.53
LINC00958-201ENST00000504230 XYLT2Q9H1B5 865 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 PLCB1Q9NQ66 1216 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 NXF1Q9UBU9 619 aaKnown RBP11.71□□□□□ -0.53
LINC00958-201ENST00000504230 ADAM28Q9UKQ2 775 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 DAAM1Q9Y4D1 1078 aa11.71□□□□□ -0.53
LINC00958-201ENST00000504230 A0A1W2PPC1 479 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 LCHNA4D1U4 455 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 LINC01553A4QN01 128 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 NT5C1B-RDH14C9J2C7 533 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 NRG2O14511 850 aaPredicted RBP11.71□□□□□ -0.54
LINC00958-201ENST00000504230 HUS1O60921 280 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 CA3P07451 260 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 RFX1P22670 979 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 TBXAS1P24557 533 aaPredicted RBP11.71□□□□□ -0.54
LINC00958-201ENST00000504230 ELAVL2Q12926 359 aaKnown RBP11.71□□□□□ -0.54
LINC00958-201ENST00000504230 SCARA3Q6AZY7 606 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 SPOPLQ6IQ16 392 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 PPM1KQ8N3J5 372 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 C3orf58Q8NDZ4 430 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 ANP32BQ92688 251 aaKnown RBP11.71□□□□□ -0.54
LINC00958-201ENST00000504230 MMS19Q96T76 1030 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 NUP58Q9BVL2 599 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 NIF3L1Q9GZT8 377 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 PRO3102Q9H379 93 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.71□□□□□ -0.546e-7■■■■■ 62.1
LINC00958-201ENST00000504230 GDAP2Q9NXN4 497 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 SPG21Q9NZD8 308 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 APEX2Q9UBZ4 518 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 STK39Q9UEW8 545 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 SIK3Q9Y2K2 1263 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 SNX9Q9Y5X1 595 aa11.71□□□□□ -0.54
LINC00958-201ENST00000504230 SF3B1O75533 1304 aaKnown RBP eCLIP11.7□□□□□ -0.544e-8■■■■■ 34.5
LINC00958-201ENST00000504230 SPTLC1O15269 473 aa11.7□□□□□ -0.54
LINC00958-201ENST00000504230 LRRN2O75325 713 aa11.7□□□□□ -0.54
LINC00958-201ENST00000504230 ADCY5O95622 1261 aa11.7□□□□□ -0.54
LINC00958-201ENST00000504230 MYOGP15173 224 aa11.7□□□□□ -0.54
LINC00958-201ENST00000504230 CTNNB1P35222 781 aa11.7□□□□□ -0.54
LINC00958-201ENST00000504230 PBX1P40424 430 aa11.7□□□□□ -0.54
LINC00958-201ENST00000504230 PBX3P40426 434 aa11.7□□□□□ -0.54
LINC00958-201ENST00000504230 BRCC3P46736 316 aa11.7□□□□□ -0.54
LINC00958-201ENST00000504230 AARSP49588 968 aaKnown RBP eCLIP11.7□□□□□ -0.54
LINC00958-201ENST00000504230 GCNT1Q02742 428 aa11.7□□□□□ -0.54
LINC00958-201ENST00000504230 KRT17Q04695 432 aa11.7□□□□□ -0.54
LINC00958-201ENST00000504230 KLHDC7AQ5VTJ3 777 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms