RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 PSMA7O14818 248 aa19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 ABLIM3O94929 683 aa19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 CD44P16070 742 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 PSMC2P35998 433 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 LRRC63Q05C16 580 aa19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 OVOS1Q6IE37 1185 aa19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 CYP26C1Q6V0L0 522 aa19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 C15orf39Q6ZRI6 1047 aa19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 RTL10Q7L3V2 364 aa19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 GPR149Q86SP6 731 aa19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 ZC3H3Q8IXZ2 948 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 ZNF461Q8TAF7 563 aa19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 NECTIN4Q96NY8 510 aa19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 UHRF1Q96T88 793 aaPredicted RBP19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 TSG101Q99816 390 aa19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 MKNK1Q9BUB5 465 aa19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 COL25A1Q9BXS0 654 aaPredicted RBP19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 ZDHHC7Q9NXF8 308 aa19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 R3HCC1Q9Y3T6 440 aaKnown RBP19.63■□□□□ 0.73
PDLIM7-209ENST00000503346 WDR27A2RRH5 827 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 SPDYE4A6NLX3 237 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 PPP1R3GB7ZBB8 358 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 GOLGA6L22H0YM25 854 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 BIN1O00499 593 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 CETN3O15182 167 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 ZMYND10O75800 440 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 CCNE1P24864 410 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 MTHFRP42898 656 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 PMS1P54277 932 aaKnown RBP19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 MCCD1P59942 119 aaPredicted RBP19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 BFSP1Q12934 665 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 MYO1EQ12965 1108 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 CBX2Q14781 532 aaPredicted RBP19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 LIN9Q5TKA1 542 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 TPGS2Q68CL5 300 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 ANKRD40Q6AI12 368 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 TMC5Q6UXY8 1006 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 INTS8Q75QN2 995 aaKnown RBP19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 FAM186BQ8IYM0 893 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 HPDLQ96IR7 371 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 RIPOR3Q96MK2 946 aa19.62■□□□□ 0.73
PDLIM7-209ENST00000503346 VCANP13611 3396 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 CCDC195A0A1B0GUA6 201 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 IKBKBO14920 756 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 RFPL2O75678 378 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 CST3P01034 146 aaPredicted RBP19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 C4BPAP04003 597 aaKnown RBP19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 C8AP07357 584 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 HOXA9P31269 272 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 VAMP7P51809 220 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 ARPP19P56211 112 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 DLG4P78352 724 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 FKBP3Q00688 224 aaKnown RBP19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 ZP2Q05996 745 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 UVSSAQ2YD98 709 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 ATAT1Q5SQI0 421 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 WSCD1Q658N2 575 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 FOXR2Q6PJQ5 311 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 METTL23Q86XA0 190 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 ADHFE1Q8IWW8 467 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 NECAB3Q96P71 396 aaPredicted RBP19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 PHF7Q9BWX1 381 aaPredicted RBP19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 AFF4Q9UHB7 1163 aaKnown RBP19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 CDH22Q9UJ99 828 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 MAFFQ9ULX9 164 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 SNX9Q9Y5X1 595 aa19.61■□□□□ 0.73
PDLIM7-209ENST00000503346 STAU1O95793 577 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-209ENST00000503346 KRT13P13646 458 aa19.6■□□□□ 0.73
PDLIM7-209ENST00000503346 ATF2P15336 505 aa19.6■□□□□ 0.73
PDLIM7-209ENST00000503346 C1orf220Q5T0J3 134 aa19.6■□□□□ 0.73
PDLIM7-209ENST00000503346 TDRD10Q5VZ19 366 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-209ENST00000503346 LIMS2Q7Z4I7 341 aa19.6■□□□□ 0.73
PDLIM7-209ENST00000503346 PDCL2Q8N4E4 241 aa19.6■□□□□ 0.73
PDLIM7-209ENST00000503346 TOP6BLQ8N6T0 577 aa19.6■□□□□ 0.73
PDLIM7-209ENST00000503346 FEZF2Q8TBJ5 459 aa19.6■□□□□ 0.73
PDLIM7-209ENST00000503346 SPATA18Q8TC71 538 aa19.6■□□□□ 0.73
PDLIM7-209ENST00000503346 ZNF707Q96C28 371 aaPredicted RBP19.6■□□□□ 0.73
PDLIM7-209ENST00000503346 RTP3Q9BQQ7 232 aa19.6■□□□□ 0.73
PDLIM7-209ENST00000503346 PRKD2Q9BZL6 878 aa19.6■□□□□ 0.73
PDLIM7-209ENST00000503346 L1RE1Q9UN81 338 aa19.6■□□□□ 0.73
PDLIM7-209ENST00000503346 PLXNA3P51805 1871 aa19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 TRIM49BA6NDI0 452 aa19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 C19orf67A6NJJ6 358 aa19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 SLC16A3O15427 465 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 HUS1O60921 280 aa19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 POU2F2P09086 479 aa19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 HNRNPA1P09651 372 aaKnown RBP eCLIP19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 WEE2P0C1S8 567 aa19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 EPB41P11171 864 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 CPB1P15086 417 aa19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 ATICP31939 592 aa19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 GPR17Q13304 367 aa19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 TRPC3Q13507 836 aa19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 ZACNQ401N2 412 aa19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 TTI2Q6NXR4 508 aa19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 CCDC149Q6ZUS6 474 aa19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 DPH6Q7L8W6 267 aa19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 THEM5Q8N1Q8 247 aa19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 TMEM86AQ8N2M4 240 aa19.59■□□□□ 0.73
PDLIM7-209ENST00000503346 OR10T2Q8NGX3 314 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms