RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 C2orf16Q68DN1 1984 aa17.25■□□□□ 0.35
ERGIC3-216ENST00000488384 SPDYE4A6NLX3 237 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 BIN1O00499 593 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 MAPK13O15264 365 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 AKAP3O75969 853 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 PAPLNO95428 1278 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 CD44P16070 742 aaKnown RBP17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 RPL13P26373 211 aaKnown RBP17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 CLDN10P78369 228 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 ZP2Q05996 745 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 BFSP1Q12934 665 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 CBX2Q14781 532 aaPredicted RBP17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 OVOS1Q6IE37 1185 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 CENPPQ6IPU0 288 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 CES5AQ6NT32 575 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 ELMSAN1Q6PJG2 1045 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 TRAPPC11Q7Z392 1133 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 GPR149Q86SP6 731 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 USP37Q86T82 979 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 ZNF707Q96C28 371 aaPredicted RBP17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 EPHX3Q9H6B9 360 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 PRKAG3Q9UGI9 489 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 FRMD4BQ9Y2L6 1034 aa17.24■□□□□ 0.35
ERGIC3-216ENST00000488384 ARHGEF37A1IGU5 675 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 TRIM49BA6NDI0 452 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 CYB561D2O14569 222 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 ZMYND10O75800 440 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 ABLIM3O94929 683 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 C8AP07357 584 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 ARPP19P56211 112 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 DLG4P78352 724 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 C1orf220Q5T0J3 134 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 LIN9Q5TKA1 542 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 TDRD10Q5VZ19 366 aaKnown RBP17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 WSCD1Q658N2 575 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 C15orf39Q6ZRI6 1047 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 ADHFE1Q8IWW8 467 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 ZC3H3Q8IXZ2 948 aaKnown RBP17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 ZNF461Q8TAF7 563 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 TMC2Q8TDI7 906 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 RTP3Q9BQQ7 232 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 CLSTN2Q9H4D0 955 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 POMKQ9H5K3 350 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 ZDHHC7Q9NXF8 308 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 KIAA1468Q9P260 1216 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 DSEQ9UL01 958 aa17.23■□□□□ 0.35
ERGIC3-216ENST00000488384 CCDC195A0A1B0GUA6 201 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 OR6C75A6NL08 312 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 PPP1R3GB7ZBB8 358 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 PSMA7O14818 248 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 OR4Q2P0C623 313 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 MTHFRP42898 656 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 ADAM9Q13443 819 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 ANKRD40Q6AI12 368 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 FAM186BQ8IYM0 893 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 PDCL2Q8N4E4 241 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 OR10T2Q8NGX3 314 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 SLC7A14Q8TBB6 771 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 EEF2KMTQ96G04 330 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 HPDLQ96IR7 371 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 RIPOR3Q96MK2 946 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 NECTIN4Q96NY8 510 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 TSG101Q99816 390 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 OXCT2Q9BYC2 517 aaPredicted RBP17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 RHOBTB2Q9BYZ6 727 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 GDAP2Q9NXN4 497 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 L1RE1Q9UN81 338 aa17.22■□□□□ 0.35
ERGIC3-216ENST00000488384 VNN2O95498 520 aa17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 CST3P01034 146 aaPredicted RBP17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 CPB1P15086 417 aa17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 ATF2P15336 505 aa17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 COL9A1P20849 921 aa17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 CCNE1P24864 410 aa17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 HOXA9P31269 272 aa17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 PSMC2P35998 433 aaKnown RBP17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 PPP1R2P41236 205 aa17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 AP3M2P53677 418 aa17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 LRRC63Q05C16 580 aa17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 MYO1EQ12965 1108 aa17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 STIM1Q13586 685 aa17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 TPGS2Q68CL5 300 aa17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 INTS8Q75QN2 995 aaKnown RBP17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 TRIML1Q8N9V2 468 aa17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 DHTKD1Q96HY7 919 aaPredicted RBP17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 TMEM209Q96SK2 561 aa17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 MKNK1Q9BUB5 465 aa17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 PHF7Q9BWX1 381 aaPredicted RBP17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 SNX9Q9Y5X1 595 aa17.21■□□□□ 0.35
ERGIC3-216ENST00000488384 C19orf67A6NJJ6 358 aa17.2■□□□□ 0.34
ERGIC3-216ENST00000488384 CETN3O15182 167 aa17.2■□□□□ 0.34
ERGIC3-216ENST00000488384 SEC24AO95486 1093 aa17.2■□□□□ 0.34
ERGIC3-216ENST00000488384 C4BPAP04003 597 aaKnown RBP17.2■□□□□ 0.34
ERGIC3-216ENST00000488384 TRIM49P0CI25 452 aa17.2■□□□□ 0.34
ERGIC3-216ENST00000488384 TRIM49CP0CI26 452 aa17.2■□□□□ 0.34
ERGIC3-216ENST00000488384 VAMP7P51809 220 aa17.2■□□□□ 0.34
ERGIC3-216ENST00000488384 ENPEPQ07075 957 aa17.2■□□□□ 0.34
ERGIC3-216ENST00000488384 BIRC3Q13489 604 aa17.2■□□□□ 0.34
ERGIC3-216ENST00000488384 ZACNQ401N2 412 aa17.2■□□□□ 0.34
ERGIC3-216ENST00000488384 PPM1LQ5SGD2 360 aa17.2■□□□□ 0.34
ERGIC3-216ENST00000488384 ATAT1Q5SQI0 421 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms