RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 PHLDB3Q6NSJ2 640 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 GJB7Q6PEY0 223 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 ARHGEF19Q8IW93 802 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 FIBCD1Q8N539 461 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 LRRC52Q8N7C0 313 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 BCL7CQ8WUZ0 217 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-229ENST00000486665 MRPL38Q96DV4 380 aaKnown RBP13.73□□□□□ -0.21
HDAC6-229ENST00000486665 TMEM175Q9BSA9 504 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 MARCH5Q9NX47 278 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 POLIQ9UNA4 740 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 FAN1Q9Y2M0 1017 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 NUB1Q9Y5A7 615 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-229ENST00000486665 PDCD11Q14690 1871 aaKnown RBP13.73□□□□□ -0.21
HDAC6-229ENST00000486665 MUC6Q6W4X9 2439 aa13.73□□□□□ -0.21
HDAC6-229ENST00000486665 KIAA1671Q9BY89 1806 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 A0A1W2PQC6 194 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 I3L4J1 428 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 EPHB6O15197 1021 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 B3GAT3O94766 335 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 NOL4O94818 638 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 KIF4AO95239 1232 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 ADCY5O95622 1261 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 STAU1O95793 577 aaKnown RBP13.72□□□□□ -0.21
HDAC6-229ENST00000486665 ATICP31939 592 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 BRCC3P46736 316 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 TAF6P49848 677 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 MRE11P49959 708 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 GPM6BQ13491 265 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 ZNF699Q32M78 642 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 TCEAL5Q5H9L2 206 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 KLHDC7AQ5VTJ3 777 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 PTCRAQ6ISU1 281 aaPredicted RBP13.72□□□□□ -0.21
HDAC6-229ENST00000486665 TRIM65Q6PJ69 517 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 KCNT2Q6UVM3 1135 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 TMEM173Q86WV6 379 aaPredicted RBP13.72□□□□□ -0.21
HDAC6-229ENST00000486665 HASPINQ8TF76 798 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 PCMTD1Q96MG8 357 aaPredicted RBP13.72□□□□□ -0.21
HDAC6-229ENST00000486665 COLEC11Q9BWP8 271 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 VRTNQ9H8Y1 702 aa13.72□□□□□ -0.21
HDAC6-229ENST00000486665 NXF1Q9UBU9 619 aaKnown RBP13.72□□□□□ -0.21
HDAC6-229ENST00000486665 AJAP1Q9UKB5 411 aaPredicted RBP13.72□□□□□ -0.21
HDAC6-229ENST00000486665 R3HCC1Q9Y3T6 440 aaKnown RBP13.72□□□□□ -0.21
HDAC6-229ENST00000486665 GRXCR2A6NFK2 248 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 KPNA7A9QM74 516 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 H3BNC9 293 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 TADA2AO75478 443 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 NOP14P78316 857 aaKnown RBP13.71□□□□□ -0.21
HDAC6-229ENST00000486665 MYO1EQ12965 1108 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 WDR72Q3MJ13 1102 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 TIGD5Q53EQ6 642 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 WDR44Q5JSH3 913 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 RRAGAQ7L523 313 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 VSTM4Q8IW00 320 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 GJD3Q8N144 294 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 COLGALT1Q8NBJ5 622 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 TAF4BQ92750 862 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 CLP1Q92989 425 aaKnown RBP13.71□□□□□ -0.21
HDAC6-229ENST00000486665 KAT5Q92993 513 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 MRFAP1L1Q96HT8 127 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 GANQ9H2C0 597 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 PLCB1Q9NQ66 1216 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 FAM207AQ9NSI2 230 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-229ENST00000486665 WDFY4Q6ZS81 3184 aa13.71□□□□□ -0.21
HDAC6-229ENST00000486665 TMEM189-UBE2V1I3L0A0 370 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 RNF225M0QZC1 329 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-229ENST00000486665 TPM3P06753 285 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 LAG3P18627 525 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 PNPLA4P41247 253 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 ALDH7A1P49419 539 aaKnown RBP13.7□□□□□ -0.22
HDAC6-229ENST00000486665 AARSP49588 968 aaKnown RBP eCLIP13.7□□□□□ -0.22
HDAC6-229ENST00000486665 CDH8P55286 799 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 SV2CQ496J9 727 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 ZNF667Q5HYK9 610 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 IQCEQ6IPM2 695 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 TAS1R1Q7RTX1 841 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 SLC39A11Q8N1S5 342 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 CCDC150Q8NCX0 1101 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 IGSF21Q96ID5 467 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 SENP8Q96LD8 212 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 ZNF560Q96MR9 790 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 KREMEN1Q96MU8 473 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 ZNF558Q96NG5 402 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 NT5C1BQ96P26 610 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 NAA15Q9BXJ9 866 aaKnown RBP13.7□□□□□ -0.22
HDAC6-229ENST00000486665 GPR62Q9BZJ7 368 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 SDCBP2Q9H190 292 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 UBE2TQ9NPD8 197 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-229ENST00000486665 GDAP2Q9NXN4 497 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 HCN4Q9Y3Q4 1203 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 SNX9Q9Y5X1 595 aa13.7□□□□□ -0.22
HDAC6-229ENST00000486665 TDRD15B5MCY1 1934 aaKnown RBP13.7□□□□□ -0.22
HDAC6-229ENST00000486665 CYB561D2O14569 222 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 CLSTN1O94985 981 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 EFEMP2O95967 443 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 WEE2P0C1S8 567 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 BMPR1AP36894 532 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 LTBRP36941 435 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 ASPAP45381 313 aa13.69□□□□□ -0.22
HDAC6-229ENST00000486665 RAP1GAPP47736 663 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms