RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ADORA2AP29274 412 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 CNGA1P29973 690 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 SLC8A1P32418 973 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 HPDP32754 393 aaPredicted RBP7.32□□□□□ -1.24
UBR4-212ENST00000475973 MARCKSL1P49006 195 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 IFI35P80217 286 aaPredicted RBP7.32□□□□□ -1.24
UBR4-212ENST00000475973 SETQ01105 290 aaPredicted RBP7.32□□□□□ -1.24
UBR4-212ENST00000475973 KLF1Q13351 362 aaPredicted RBP7.32□□□□□ -1.24
UBR4-212ENST00000475973 PTK6Q13882 451 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 NEDD9Q14511 834 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 CCL14Q16627 93 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 CEP55Q53EZ4 464 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 ZC3H12AQ5D1E8 599 aaKnown RBP7.32□□□□□ -1.24
UBR4-212ENST00000475973 CMPK2Q5EBM0 449 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 DCAF17Q5H9S7 520 aaPredicted RBP7.32□□□□□ -1.24
UBR4-212ENST00000475973 UBAP2Q5T6F2 1119 aaKnown RBP7.32□□□□□ -1.24
UBR4-212ENST00000475973 OLFML2BQ68BL8 750 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 NOP9Q86U38 636 aaKnown RBP7.32□□□□□ -1.24
UBR4-212ENST00000475973 TDRPQ86YL5 185 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 ARHGEF19Q8IW93 802 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 ABRAQ8N0Z2 381 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 UBL4BQ8N7F7 174 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 MDM1Q8TC05 714 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 CCHCR1Q8TD31 782 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 HELQQ8TDG4 1101 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 UBLCP1Q8WVY7 318 aaPredicted RBP7.32□□□□□ -1.24
UBR4-212ENST00000475973 CKAP2Q8WWK9 683 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 DHX38Q92620 1227 aaKnown RBP7.32□□□□□ -1.24
UBR4-212ENST00000475973 ATG4CQ96DT6 458 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 MFSD14AQ96MC6 490 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 FOXP3Q9BZS1 431 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 STMN4Q9H169 189 aaPredicted RBP7.32□□□□□ -1.24
UBR4-212ENST00000475973 CXorf56Q9H5V9 222 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 POLD4Q9HCU8 107 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 ARHGEF3Q9NR81 526 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 HAUS2Q9NVX0 235 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 RASAL2Q9UJF2 1139 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 ATP8A1Q9Y2Q0 1164 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 SNX24Q9Y343 169 aa7.32□□□□□ -1.24
UBR4-212ENST00000475973 CTDP1Q9Y5B0 961 aaPredicted RBP7.32□□□□□ -1.24
UBR4-212ENST00000475973 PTPRFP10586 1907 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 ANKRD63C9JTQ0 380 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 ZC3H11AO75152 810 aaKnown RBP eCLIP7.31□□□□□ -1.24
UBR4-212ENST00000475973 FAM155BO75949 473 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 WFS1O76024 890 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 UNGP13051 313 aaPredicted RBP7.31□□□□□ -1.24
UBR4-212ENST00000475973 COMTP21964 271 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 CCND3P30281 292 aaPredicted RBP7.31□□□□□ -1.24
UBR4-212ENST00000475973 PDE6CP51160 858 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 VAMP7P51809 220 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 CDR1P51861 262 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 MNAT1P51948 309 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 SLC8A3P57103 927 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 NCALDP61601 193 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 MYL7Q01449 175 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 CAV1Q03135 178 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 PRPF4BQ13523 1007 aaKnown RBP7.31□□□□□ -1.24
UBR4-212ENST00000475973 MPP2Q14168 576 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 KCTD2Q14681 263 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 SNCBQ16143 134 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 TMEM63BQ5T3F8 832 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 DENND2CQ68D51 928 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 RNF43Q68DV7 783 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 DRICH1Q6PGQ1 229 aaPredicted RBP7.31□□□□□ -1.24
UBR4-212ENST00000475973 CCDC137Q6PK04 289 aaKnown RBP7.31□□□□□ -1.24
UBR4-212ENST00000475973 TRPM8Q7Z2W7 1104 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 ANKS1BQ7Z6G8 1248 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 FAM178BQ8IXR5 827 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 MYCT1Q8N699 235 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 SLC17A8Q8NDX2 589 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 DENND1AQ8TEH3 1009 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 SLC20A1Q8WUM9 679 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 MAML1Q92585 1016 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 C18orf8Q96DM3 657 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 FAM81BQ96LP2 452 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 CCDC114Q96M63 670 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 ANKRD27Q96NW4 1050 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 MMP19Q99542 508 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 OCSTAMPQ9BR26 566 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 PLCD4Q9BRC7 762 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 MXRA8Q9BRK3 442 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 PHACTR1Q9C0D0 580 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 TMEM117Q9H0C3 514 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 DPH5Q9H2P9 285 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 UNC45AQ9H3U1 944 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 CD248Q9HCU0 757 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 PRDM9Q9NQV7 894 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 PDLIM7Q9NR12 457 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 MAP3K20Q9NYL2 800 aaKnown RBP7.31□□□□□ -1.24
UBR4-212ENST00000475973 DONSONQ9NYP3 566 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 CNTN6Q9UQ52 1028 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 FRMD4BQ9Y2L6 1034 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 UBIAD1Q9Y5Z9 338 aa7.31□□□□□ -1.24
UBR4-212ENST00000475973 A0A1B0GUA9 196 aa7.3□□□□□ -1.24
UBR4-212ENST00000475973 TCRBV7S2A1N4TA0A589 114 aa7.3□□□□□ -1.24
UBR4-212ENST00000475973 SFI1A8K8P3 1242 aa7.3□□□□□ -1.24
UBR4-212ENST00000475973 KBTBD13C9JR72 458 aa7.3□□□□□ -1.24
UBR4-212ENST00000475973 TRAFD1O14545 582 aaPredicted RBP7.3□□□□□ -1.24
UBR4-212ENST00000475973 ZBTB39O15060 712 aa7.3□□□□□ -1.24
UBR4-212ENST00000475973 RGS16O15492 202 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms