RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 ATAD3AQ9NVI7 634 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 ARMCX3Q9UH62 379 aaPredicted RBP11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 FAF1Q9UNN5 650 aaPredicted RBP11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 TRAF3IP3Q9Y228 551 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 TRIM17Q9Y577 477 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 GJA3Q9Y6H8 435 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 TNKSO95271 1327 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 COL4A5P29400 1685 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 FUOMA2VDF0 154 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 NKRFO15226 690 aaKnown RBP eCLIP11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 DNAJC6O75061 913 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 FGFR4P22455 802 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 SLC5A2P31639 672 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 PTGIRP43119 386 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 NAA20P61599 178 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 ZBTB17Q13105 803 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 TGFBIQ15582 683 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 IL17AQ16552 155 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 KYNUQ16719 465 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 LONRF1Q17RB8 773 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 ANKRD20A4Q4UJ75 823 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 ZNF394Q53GI3 561 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 FAM91A1Q658Y4 838 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 AAGABQ6PD74 315 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 OTUD6AQ7L8S5 288 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 NLRP9Q7RTR0 991 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 NT5DC3Q86UY8 548 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 ZFP28Q8NHY6 868 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 ART4Q93070 314 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 EFHD2Q96C19 240 aaPredicted RBP11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 NSL1Q96IY1 281 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 BTBD9Q96Q07 612 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 HEPHQ9BQS7 1158 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 PARVBQ9HBI1 364 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 MLXIPLQ9NP71 852 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 SNX24Q9Y343 169 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 FOCADQ5VW36 1801 aa11.35□□□□□ -0.59
CHMP2B-203ENST00000471660 TIMM44O43615 452 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 FKBP6O75344 327 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 CLPTM1O96005 669 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 FGGP02679 453 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 ZNF12P17014 697 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 TUBA4AP68366 448 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 CREB5Q02930 508 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 PDK3Q15120 406 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 ZNF174Q15697 407 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 NDUFA5Q16718 116 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 USP41Q3LFD5 358 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 NADK2Q4G0N4 442 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 FAM83BQ5T0W9 1011 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 VPS52Q8N1B4 723 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 RIN3Q8TB24 985 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 GIPC3Q8TF64 312 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 DDX12PQ92771 950 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 SHISA4Q96DD7 197 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 NEURL2Q9BR09 285 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 SENP6Q9GZR1 1112 aaPredicted RBP11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 PCYOX1Q9UHG3 505 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 FRMPD4Q14CM0 1322 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 COL4A1P02462 1669 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 DDX60LQ5H9U9 1706 aaKnown RBP11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 FAM47DPA6NHR8 397 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 SOBPA7XYQ1 873 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 hCG_1984214I3L0E3 225 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 PRKAB2O43741 272 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 NOL4O94818 638 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 ALAS1P13196 640 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 VCLP18206 1134 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 PCSK6P29122 969 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 RPL21P46778 160 aaKnown RBP11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 BCAP31P51572 246 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 CCR3P51677 355 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 FKBP1AP62942 108 aaKnown RBP11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 PDK4Q16654 411 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 PUS10Q3MIT2 529 aaKnown RBP11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 PCNX4Q63HM2 1172 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 SNRNP48Q6IEG0 339 aaKnown RBP11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 CYFIP1Q7L576 1253 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 RASSF3Q86WH2 238 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 SP8Q8IXZ3 490 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 ZNF713Q8N859 430 aaPredicted RBP11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 CXorf38Q8TB03 319 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 ZNF296Q8WUU4 475 aaPredicted RBP11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 CSRNP1Q96S65 589 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 TUT1Q9H6E5 874 aaKnown RBP11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 CLK4Q9HAZ1 481 aaKnown RBP11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 GGA1Q9UJY5 639 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 COQ6Q9Y2Z9 468 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 PCDHB2Q9Y5E7 798 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 N6AMT1Q9Y5N5 214 aa11.34□□□□□ -0.59
CHMP2B-203ENST00000471660 A0A1W2PPC1 479 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 RASA4BC9J798 803 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 RASA4O43374 803 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 CYTH3O43739 400 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 RARBP10826 455 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 CHRNA3P32297 505 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 RXRGP48443 463 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 WDR4P57081 412 aaKnown RBP11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 ACTR3P61158 418 aa11.33□□□□□ -0.6
CHMP2B-203ENST00000471660 KCNC4Q03721 635 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms