RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 GAD2Q05329 585 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 VPS36Q86VN1 386 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 RALGPS2Q86X27 583 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-202ENST00000431736 SMARCE1Q969G3 411 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 SENP8Q96LD8 212 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 HEXIM2Q96MH2 286 aaKnown RBP4.91□□□□□ -1.62
UBE4A-202ENST00000431736 ELOVL4Q9GZR5 314 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 SCAND2PQ9GZW5 306 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-202ENST00000431736 KATNBL1Q9H079 304 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 AASDHPPTQ9NRN7 309 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 RASAL2Q9UJF2 1139 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 PSME4Q14997 1843 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 SPTLC2O15270 562 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 MED7O43513 233 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 PDE4CQ08493 712 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 KCNH2Q12809 1159 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 MYBPC2Q14324 1141 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 TSGA10IPQ3SY00 556 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 FNDC3BQ53EP0 1204 aaKnown RBP4.91□□□□□ -1.62
UBE4A-202ENST00000431736 FMNL3Q8IVF7 1028 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 FOXJ1Q92949 421 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 CASD1Q96PB1 797 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 P2RY13Q9BPV8 354 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 ZBP1Q9H171 429 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 STN1Q9H668 368 aaKnown RBP4.91□□□□□ -1.62
UBE4A-202ENST00000431736 HES2Q9Y543 173 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 INSL5Q9Y5Q6 135 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 NUMBLQ9Y6R0 609 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 R4GN57 208 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 KAT6AQ92794 2004 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 OPLAHO14841 1288 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 TSPAN1O60635 241 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 CCNE2O96020 404 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 ARF4P18085 180 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-202ENST00000431736 PTGS1P23219 599 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 YWHAQP27348 245 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 GNL1P36915 607 aaPredicted RBP4.91□□□□□ -1.62
UBE4A-202ENST00000431736 SLC11A2P49281 568 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 NOVA1P51513 510 aaKnown RBP4.91□□□□□ -1.62
UBE4A-202ENST00000431736 NR5A1Q13285 461 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 LRRC31Q6UY01 552 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 AGMOQ6ZNB7 445 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 NELFCDQ8IXH7 590 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 MAB21L3Q8N8X9 362 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 TSC1Q92574 1164 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 NCAPGQ9BPX3 1015 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 BECN2A8MW95 431 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 PSMD10O75832 226 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 DNTTP04053 509 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 DCNP07585 359 aaKnown RBP4.91□□□□□ -1.62
UBE4A-202ENST00000431736 GLULP15104 373 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 CETN2P41208 172 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 MTIF2P46199 727 aaKnown RBP4.91□□□□□ -1.62
UBE4A-202ENST00000431736 AARSP49588 968 aaKnown RBP eCLIP4.91□□□□□ -1.62
UBE4A-202ENST00000431736 PRR23CQ6ZRP0 262 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 ZSCAN1Q8NBB4 408 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 ZNF461Q8TAF7 563 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 WHAMMQ8TF30 809 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 TMEM209Q96SK2 561 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 DDX43Q9NXZ2 648 aaKnown RBP4.91□□□□□ -1.62
UBE4A-202ENST00000431736 ITGA11Q9UKX5 1188 aa4.91□□□□□ -1.62
UBE4A-202ENST00000431736 CAPN8A6NHC0 703 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 SFI1A8K8P3 1242 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 DAPK3O43293 454 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 HOXD8P13378 290 aaPredicted RBP4.9□□□□□ -1.62
UBE4A-202ENST00000431736 LAMP2P13473 410 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 RARRES1P49788 294 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 SCRN1Q12765 414 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 CCDC70Q6NSX1 233 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 SYNPOQ8N3V7 929 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 CEP76Q8TAP6 659 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 SYT15Q9BQS2 421 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 ARHGEF4Q9NR80 690 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 MOSPD1Q9UJG1 213 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 HPCAL4Q9UM19 191 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 YIPF1Q9Y548 306 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 BACE2Q9Y5Z0 518 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 AK5Q9Y6K8 562 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 HEPACAM2A8MVW5 462 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 E9PMD0 336 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 AOC1P19801 751 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 CCNE1P24864 410 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 CHKAP35790 457 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 PRPHP41219 470 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 NHLH1Q02575 133 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 FOXC1Q12948 553 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 DUSP4Q13115 394 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 HECTD3Q5T447 861 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 ATL3Q6DD88 541 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 HOOK3Q86VS8 718 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 SCG3Q8WXD2 468 aaKnown RBP4.9□□□□□ -1.62
UBE4A-202ENST00000431736 GJA10Q969M2 543 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 PCIF1Q9H4Z3 704 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 SLC25A13Q9UJS0 675 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 MYH8P13535 1937 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 FAM47DPA6NHR8 397 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 HIDE1A8MVS5 230 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 TGM5O43548 720 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 FAM200BP0CF97 657 aa4.9□□□□□ -1.62
UBE4A-202ENST00000431736 CYP3A5P20815 502 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms