RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ZFYVE28Q9HCC9 887 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 ERVK-5Q9HDB9 667 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 MTUS1Q9ULD2 1270 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 CEP83Q9Y592 693 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 SMIM35A0A1B0GVV1 85 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 GOLGA6BA6NDN3 693 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 FAM153BP0C7A2 387 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 CYP2C9P11712 490 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 P4HA1P13674 534 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 MMP8P22894 467 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 GRM5P41594 1212 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 RAP1GAPP47736 663 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 PSEN2P49810 448 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 CPT1AP50416 773 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 TERF2Q15554 542 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 FAM153CQ494X1 144 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 CATSPER4Q7RTX7 472 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 CELF4Q9BZC1 486 aaKnown RBP26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 FAM153AQ9UHL3 310 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 PCDHGC3Q9UN70 934 aa26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.23■■□□□ 1.79
DNMT3A-206ENST00000406659 PHF2O75151 1096 aa26.22■■□□□ 1.79
DNMT3A-206ENST00000406659 MYL3P08590 195 aa26.22■■□□□ 1.79
DNMT3A-206ENST00000406659 GUCY2FP51841 1108 aa26.22■■□□□ 1.79
DNMT3A-206ENST00000406659 FAM193AP78312 1265 aa26.22■■□□□ 1.79
DNMT3A-206ENST00000406659 DR1Q01658 176 aa26.22■■□□□ 1.79
DNMT3A-206ENST00000406659 SLC13A5Q86YT5 568 aaPredicted RBP26.22■■□□□ 1.79
DNMT3A-206ENST00000406659 CD302Q8IX05 232 aa26.22■■□□□ 1.79
DNMT3A-206ENST00000406659 PPP1R13LQ8WUF5 828 aa26.22■■□□□ 1.79
DNMT3A-206ENST00000406659 TFAP2BQ92481 460 aa26.22■■□□□ 1.79
DNMT3A-206ENST00000406659 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.22■■□□□ 1.793e-6■■□□□ 14.1
DNMT3A-206ENST00000406659 C2CD2Q9Y426 696 aa26.22■■□□□ 1.79
DNMT3A-206ENST00000406659 MED7O43513 233 aa26.21■■□□□ 1.79
DNMT3A-206ENST00000406659 GPR32O75388 356 aa26.21■■□□□ 1.79
DNMT3A-206ENST00000406659 NPTXRO95502 500 aa26.21■■□□□ 1.79
DNMT3A-206ENST00000406659 CD19P15391 556 aa26.21■■□□□ 1.79
DNMT3A-206ENST00000406659 POLR2BP30876 1174 aaKnown RBP26.21■■□□□ 1.79
DNMT3A-206ENST00000406659 DHX34Q14147 1143 aaKnown RBP26.21■■□□□ 1.79
DNMT3A-206ENST00000406659 NT5DC4Q86YG4 428 aa26.21■■□□□ 1.79
DNMT3A-206ENST00000406659 C1orf131Q8NDD1 294 aaKnown RBP26.21■■□□□ 1.79
DNMT3A-206ENST00000406659 FEZF2Q8TBJ5 459 aa26.21■■□□□ 1.79
DNMT3A-206ENST00000406659 SOCS4Q8WXH5 440 aa26.21■■□□□ 1.79
DNMT3A-206ENST00000406659 APBA2Q99767 749 aa26.21■■□□□ 1.79
DNMT3A-206ENST00000406659 RAB17Q9H0T7 212 aa26.21■■□□□ 1.79
DNMT3A-206ENST00000406659 ITGA11Q9UKX5 1188 aa26.21■■□□□ 1.79
DNMT3A-206ENST00000406659 AGAP1Q9UPQ3 857 aa26.21■■□□□ 1.79
DNMT3A-206ENST00000406659 MBLAC1A4D2B0 266 aaPredicted RBP26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 FAM187AA6NFU0 413 aa26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 SLC10A3P09131 477 aa26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 CHRNA3P32297 505 aa26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 GGCXP38435 758 aa26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 CDH8P55286 799 aa26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 ALS2CLQ60I27 953 aa26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 TMEM130Q8N3G9 435 aa26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 TSEN2Q8NCE0 465 aaKnown RBP26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 CXorf38Q8TB03 319 aa26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 MAGOHBQ96A72 148 aaKnown RBP26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 HPDLQ96IR7 371 aa26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 VRTNQ9H8Y1 702 aa26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 CYP3A43Q9HB55 503 aa26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 FAM114A2Q9NRY5 505 aa26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 DPP3Q9NY33 737 aa26.2■■□□□ 1.79
DNMT3A-206ENST00000406659 TNPO2O14787 897 aaKnown RBP26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 TLR3O15455 904 aaKnown RBP26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 HSF2BPO75031 334 aa26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 PAEPP09466 180 aa26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 EIF4BP23588 611 aaKnown RBP26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 IRX5P78411 483 aaPredicted RBP26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 RBP5P82980 135 aa26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 RUFY4Q6ZNE9 571 aa26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 DDX42Q86XP3 938 aaKnown RBP eCLIP26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 PRELID2Q8N945 189 aa26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 KIF12Q96FN5 646 aa26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 SDCBP2Q9H190 292 aa26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 SMYD3Q9H7B4 428 aa26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 CDHR5Q9HBB8 845 aa26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 VPS18Q9P253 973 aa26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 GJD2Q9UKL4 321 aa26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 Q9Y3F1 56 aa26.2■■□□□ 1.78
DNMT3A-206ENST00000406659 DAPK3O43293 454 aa26.19■■□□□ 1.78
DNMT3A-206ENST00000406659 SYF2O95926 243 aaKnown RBP26.19■■□□□ 1.78
DNMT3A-206ENST00000406659 CDH5P33151 784 aaPredicted RBP26.19■■□□□ 1.78
DNMT3A-206ENST00000406659 SLC27A1Q6PCB7 646 aa26.19■■□□□ 1.78
DNMT3A-206ENST00000406659 ERICH1Q86X53 443 aa26.19■■□□□ 1.78
DNMT3A-206ENST00000406659 OSMRQ99650 979 aa26.19■■□□□ 1.78
DNMT3A-206ENST00000406659 IP6K2Q9UHH9 426 aa26.19■■□□□ 1.78
DNMT3A-206ENST00000406659 RASAL2Q9UJF2 1139 aa26.19■■□□□ 1.78
DNMT3A-206ENST00000406659 FAN1Q9Y2M0 1017 aa26.19■■□□□ 1.78
DNMT3A-206ENST00000406659 HOXA11P31270 313 aaPredicted RBP26.18■■□□□ 1.78
DNMT3A-206ENST00000406659 RAD23BP54727 409 aa26.18■■□□□ 1.78
DNMT3A-206ENST00000406659 PCBP1Q15365 356 aaKnown RBP eCLIP26.18■■□□□ 1.78
DNMT3A-206ENST00000406659 MREGQ8N565 214 aa26.18■■□□□ 1.78
DNMT3A-206ENST00000406659 SEC14L1Q92503 715 aa26.18■■□□□ 1.78
DNMT3A-206ENST00000406659 TRIM51Q9BSJ1 452 aa26.18■■□□□ 1.78
DNMT3A-206ENST00000406659 HAS3O00219 553 aa26.18■■□□□ 1.78
DNMT3A-206ENST00000406659 DARSP14868 501 aaKnown RBP26.18■■□□□ 1.78
DNMT3A-206ENST00000406659 BEX3Q00994 111 aa26.18■■□□□ 1.78
DNMT3A-206ENST00000406659 DENND1BQ6P3S1 775 aa26.18■■□□□ 1.78
DNMT3A-206ENST00000406659 DNAJC24Q6P3W2 148 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms