RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 RBP5P82980 135 aa20.3■□□□□ 0.84
CLDND1-203ENST00000394181 SLC7A5Q01650 507 aa20.3■□□□□ 0.84
CLDND1-203ENST00000394181 ZNF211Q13398 564 aaPredicted RBP20.3■□□□□ 0.84
CLDND1-203ENST00000394181 ZBTB6Q15916 424 aa20.3■□□□□ 0.84
CLDND1-203ENST00000394181 AADACL2Q6P093 401 aa20.3■□□□□ 0.84
CLDND1-203ENST00000394181 TAF2Q6P1X5 1199 aa20.3■□□□□ 0.84
CLDND1-203ENST00000394181 USP38Q8NB14 1042 aa20.3■□□□□ 0.84
CLDND1-203ENST00000394181 ARRDC4Q8NCT1 418 aa20.3■□□□□ 0.84
CLDND1-203ENST00000394181 KLHDC9Q8NEP7 349 aa20.3■□□□□ 0.84
CLDND1-203ENST00000394181 ELOVL4Q9GZR5 314 aa20.3■□□□□ 0.84
CLDND1-203ENST00000394181 PLEKHA4Q9H4M7 779 aa20.3■□□□□ 0.84
CLDND1-203ENST00000394181 ITGA11Q9UKX5 1188 aa20.3■□□□□ 0.84
CLDND1-203ENST00000394181 SCN10AQ9Y5Y9 1956 aa20.3■□□□□ 0.84
CLDND1-203ENST00000394181 CHRNA1P02708 482 aa20.29■□□□□ 0.84
CLDND1-203ENST00000394181 MRPS6P82932 125 aaKnown RBP20.29■□□□□ 0.84
CLDND1-203ENST00000394181 ITIH3Q06033 890 aa20.29■□□□□ 0.84
CLDND1-203ENST00000394181 PCBP1Q15365 356 aaKnown RBP eCLIP20.29■□□□□ 0.84
CLDND1-203ENST00000394181 CC2D1AQ6P1N0 951 aaPredicted RBP20.29■□□□□ 0.84
CLDND1-203ENST00000394181 C1orf131Q8NDD1 294 aaKnown RBP20.29■□□□□ 0.84
CLDND1-203ENST00000394181 PLEKHA5Q9HAU0 1116 aa20.29■□□□□ 0.84
CLDND1-203ENST00000394181 ADAM22Q9P0K1 906 aa20.29■□□□□ 0.84
CLDND1-203ENST00000394181 RNF14Q9UBS8 474 aa20.29■□□□□ 0.84
CLDND1-203ENST00000394181 TRIP11Q15643 1979 aa20.29■□□□□ 0.84
CLDND1-203ENST00000394181 AXLP30530 894 aa20.29■□□□□ 0.84
CLDND1-203ENST00000394181 ATICP31939 592 aa20.29■□□□□ 0.84
CLDND1-203ENST00000394181 YARSP54577 528 aaKnown RBP20.29■□□□□ 0.84
CLDND1-203ENST00000394181 DENND1BQ6P3S1 775 aa20.29■□□□□ 0.84
CLDND1-203ENST00000394181 TRIM72Q6ZMU5 477 aa20.29■□□□□ 0.84
CLDND1-203ENST00000394181 SMG8Q8ND04 991 aaKnown RBP20.29■□□□□ 0.84
CLDND1-203ENST00000394181 AP1M1Q9BXS5 423 aa20.29■□□□□ 0.84
CLDND1-203ENST00000394181 VRTNQ9H8Y1 702 aa20.29■□□□□ 0.84
CLDND1-203ENST00000394181 ARGLU1Q9NWB6 273 aaPredicted RBP20.29■□□□□ 0.84
CLDND1-203ENST00000394181 UVRAGQ9P2Y5 699 aa20.29■□□□□ 0.84
CLDND1-203ENST00000394181 DMGDHQ9UI17 866 aaKnown RBP20.29■□□□□ 0.84
CLDND1-203ENST00000394181 CES2O00748 559 aa20.28■□□□□ 0.84
CLDND1-203ENST00000394181 CD19P15391 556 aa20.28■□□□□ 0.84
CLDND1-203ENST00000394181 APLP1P51693 650 aa20.28■□□□□ 0.84
CLDND1-203ENST00000394181 DAB2IPQ5VWQ8 1189 aa20.28■□□□□ 0.84
CLDND1-203ENST00000394181 PHF13Q86YI8 300 aaPredicted RBP20.28■□□□□ 0.84
CLDND1-203ENST00000394181 CD302Q8IX05 232 aa20.28■□□□□ 0.84
CLDND1-203ENST00000394181 SLC4A11Q8NBS3 891 aa20.28■□□□□ 0.84
CLDND1-203ENST00000394181 ACTRT1Q8TDG2 376 aa20.28■□□□□ 0.84
CLDND1-203ENST00000394181 PARP2Q9UGN5 583 aa20.28■□□□□ 0.84
CLDND1-203ENST00000394181 ANAPC7Q9UJX3 599 aa20.28■□□□□ 0.84
CLDND1-203ENST00000394181 IPPQ9Y573 584 aa20.28■□□□□ 0.84
CLDND1-203ENST00000394181 CITO14578 2027 aa20.28■□□□□ 0.84
CLDND1-203ENST00000394181 VEGFBP49765 207 aa20.28■□□□□ 0.84
CLDND1-203ENST00000394181 SERINC5Q86VE9 423 aa20.28■□□□□ 0.84
CLDND1-203ENST00000394181 CD101Q93033 1021 aa20.28■□□□□ 0.84
CLDND1-203ENST00000394181 CNTN3Q9P232 1028 aa20.28■□□□□ 0.84
CLDND1-203ENST00000394181 TMEM59LQ9UK28 342 aa20.28■□□□□ 0.84
CLDND1-203ENST00000394181 SMIM28A0A1B0GU29 152 aa20.27■□□□□ 0.84
CLDND1-203ENST00000394181 MEIS3P2A8K0S8 358 aa20.27■□□□□ 0.84
CLDND1-203ENST00000394181 CILPO75339 1184 aa20.27■□□□□ 0.84
CLDND1-203ENST00000394181 ZRANB2O95218 330 aaKnown RBP eCLIP20.27■□□□□ 0.84
CLDND1-203ENST00000394181 ITGA4P13612 1032 aa20.27■□□□□ 0.84
CLDND1-203ENST00000394181 TMCO3Q6UWJ1 677 aa20.27■□□□□ 0.84
CLDND1-203ENST00000394181 APBB1IPQ7Z5R6 666 aaPredicted RBP20.27■□□□□ 0.84
CLDND1-203ENST00000394181 NT5DC4Q86YG4 428 aa20.27■□□□□ 0.84
CLDND1-203ENST00000394181 RASGEF1CQ8N431 466 aa20.27■□□□□ 0.84
CLDND1-203ENST00000394181 SELENOOQ9BVL4 669 aa20.27■□□□□ 0.84
CLDND1-203ENST00000394181 AVENQ9NQS1 362 aaPredicted RBP20.27■□□□□ 0.84
CLDND1-203ENST00000394181 CYTH4Q9UIA0 394 aa20.27■□□□□ 0.84
CLDND1-203ENST00000394181 NR2E1Q9Y466 385 aa20.27■□□□□ 0.84
CLDND1-203ENST00000394181 MMP8P22894 467 aa20.27■□□□□ 0.83
CLDND1-203ENST00000394181 PEX5P50542 639 aa20.27■□□□□ 0.83
CLDND1-203ENST00000394181 NFX1Q12986 1120 aaKnown RBP20.27■□□□□ 0.83
CLDND1-203ENST00000394181 MAMLD1Q13495 774 aa20.27■□□□□ 0.83
CLDND1-203ENST00000394181 MAP3K21Q5TCX8 1036 aa20.27■□□□□ 0.83
CLDND1-203ENST00000394181 TWF2Q6IBS0 349 aaKnown RBP20.27■□□□□ 0.83
CLDND1-203ENST00000394181 MTERF4Q7Z6M4 381 aaKnown RBP20.27■□□□□ 0.83
CLDND1-203ENST00000394181 KRT12Q99456 494 aa20.27■□□□□ 0.83
CLDND1-203ENST00000394181 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.27■□□□□ 0.83
CLDND1-203ENST00000394181 GOLGA2P5Q9HBQ8 144 aa20.27■□□□□ 0.83
CLDND1-203ENST00000394181 ST3GAL5Q9UNP4 418 aa20.27■□□□□ 0.83
CLDND1-203ENST00000394181 ADAT2Q7Z6V5 191 aaKnown RBP20.26■□□□□ 0.83
CLDND1-203ENST00000394181 KLHL7Q8IXQ5 586 aa20.26■□□□□ 0.83
CLDND1-203ENST00000394181 RPS6KC1Q96S38 1066 aa20.26■□□□□ 0.83
CLDND1-203ENST00000394181 SENP6Q9GZR1 1112 aaPredicted RBP20.26■□□□□ 0.83
CLDND1-203ENST00000394181 TJP2Q9UDY2 1190 aa20.26■□□□□ 0.83
CLDND1-203ENST00000394181 DERAQ9Y315 318 aa20.26■□□□□ 0.83
CLDND1-203ENST00000394181 TRPV2Q9Y5S1 764 aa20.26■□□□□ 0.83
CLDND1-203ENST00000394181 CCDC151A5D8V7 595 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 HMGCRP04035 888 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 MYBL1P10243 752 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 YWHAEP62258 255 aaKnown RBP20.25■□□□□ 0.83
CLDND1-203ENST00000394181 SOX4Q06945 474 aaPredicted RBP20.25■□□□□ 0.83
CLDND1-203ENST00000394181 BRD3Q15059 726 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 WDR93Q6P2C0 686 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 SESTD1Q86VW0 696 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 GSPT2Q8IYD1 628 aaKnown RBP20.25■□□□□ 0.83
CLDND1-203ENST00000394181 REM2Q8IYK8 340 aaPredicted RBP20.25■□□□□ 0.83
CLDND1-203ENST00000394181 TMEM176AQ96HP8 235 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 MRPL45Q9BRJ2 306 aaKnown RBP20.25■□□□□ 0.83
CLDND1-203ENST00000394181 CFHR5Q9BXR6 569 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 AGO3Q9H9G7 860 aaKnown RBP20.25■□□□□ 0.83
CLDND1-203ENST00000394181 TRMT13Q9NUP7 481 aaKnown RBP20.25■□□□□ 0.83
CLDND1-203ENST00000394181 PCDHGC3Q9UN70 934 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 NME7Q9Y5B8 376 aa20.25■□□□□ 0.83
CLDND1-203ENST00000394181 SPDYE4A6NLX3 237 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms