RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 KDM3AQ9Y4C1 1321 aa19.32■□□□□ 0.68
MMP9-201ENST00000372330 USP17L10C9JJH3 530 aa19.32■□□□□ 0.68
MMP9-201ENST00000372330 NDC80O14777 642 aa19.32■□□□□ 0.68
MMP9-201ENST00000372330 HARSP12081 509 aaKnown RBP19.32■□□□□ 0.68
MMP9-201ENST00000372330 MARCKSL1P49006 195 aa19.32■□□□□ 0.68
MMP9-201ENST00000372330 SERPINB8P50452 374 aa19.32■□□□□ 0.68
MMP9-201ENST00000372330 ACTR3P61158 418 aa19.32■□□□□ 0.68
MMP9-201ENST00000372330 HYIQ5T013 277 aa19.32■□□□□ 0.68
MMP9-201ENST00000372330 TCERG1LQ5VWI1 586 aa19.32■□□□□ 0.68
MMP9-201ENST00000372330 APOBEC3HQ6NTF7 200 aaKnown RBP19.32■□□□□ 0.68
MMP9-201ENST00000372330 KCTD1Q719H9 257 aa19.32■□□□□ 0.68
MMP9-201ENST00000372330 SATL1Q86VE3 508 aa19.32■□□□□ 0.68
MMP9-201ENST00000372330 ABTB1Q969K4 478 aaPredicted RBP19.32■□□□□ 0.68
MMP9-201ENST00000372330 TEKT1Q969V4 418 aa19.32■□□□□ 0.68
MMP9-201ENST00000372330 SLC35C1Q96A29 364 aa19.32■□□□□ 0.68
MMP9-201ENST00000372330 ZNF148Q9UQR1 794 aa19.32■□□□□ 0.68
MMP9-201ENST00000372330 TCRBV7S2A1N4TA0A589 114 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 UQCRBP14927 111 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 ATF2P15336 505 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 RPA3P35244 121 aaPredicted RBP19.31■□□□□ 0.68
MMP9-201ENST00000372330 KNOP1Q1ED39 458 aaKnown RBP19.31■□□□□ 0.68
MMP9-201ENST00000372330 CCDC92Q53HC0 331 aaPredicted RBP19.31■□□□□ 0.68
MMP9-201ENST00000372330 AAGABQ6PD74 315 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 NCCRP1Q6ZVX7 275 aaPredicted RBP19.31■□□□□ 0.68
MMP9-201ENST00000372330 RASSF3Q86WH2 238 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 LRRC6Q86X45 466 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 PDSS2Q86YH6 399 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 OR6Y1Q8NGX8 325 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 CD101Q93033 1021 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 PSTPIP2Q9H939 334 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 MMP10P09238 476 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 COMTP21964 271 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 AMPD1P23109 780 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 HMGB2P26583 209 aaKnown RBP19.31■□□□□ 0.68
MMP9-201ENST00000372330 RPL5P46777 297 aaKnown RBP19.31■□□□□ 0.68
MMP9-201ENST00000372330 CLCN2P51788 898 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 ZBTB16Q05516 673 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 RASA2Q15283 850 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 SHROOM1Q2M3G4 852 aaPredicted RBP19.31■□□□□ 0.68
MMP9-201ENST00000372330 GJB7Q6PEY0 223 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 SCUBE1Q8IWY4 988 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 LARGE2Q8N3Y3 721 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 SKA1Q96BD8 255 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 CCDC97Q96F63 343 aaPredicted RBP19.31■□□□□ 0.68
MMP9-201ENST00000372330 CCDC17Q96LX7 622 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 FAM161BQ96MY7 647 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 EBF3Q9H4W6 596 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 NUMBLQ9Y6R0 609 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 NRXN2Q9P2S2 1712 aa19.31■□□□□ 0.68
MMP9-201ENST00000372330 EXOC1LA0A1B0GW35 172 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 FSCN2O14926 492 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 SLC26A4O43511 780 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 MTA2O94776 668 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 BCRP11274 1271 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 GJA8P48165 433 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 ARFIP2P53365 341 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 GPC5P78333 572 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 ARHGAP4P98171 946 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 CDK16Q00536 496 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 NFIAQ12857 509 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 DRAP1Q14919 205 aaPredicted RBP19.3■□□□□ 0.68
MMP9-201ENST00000372330 ADRM1Q16186 407 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 ECM1Q16610 540 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 SGO2Q562F6 1265 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 DUS1LQ6P1R4 473 aaKnown RBP19.3■□□□□ 0.68
MMP9-201ENST00000372330 C1orf228Q6PIY5 440 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 PASD1Q8IV76 773 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 POP1Q99575 1024 aaKnown RBP19.3■□□□□ 0.68
MMP9-201ENST00000372330 LBHD1Q9BQE6 289 aaPredicted RBP19.3■□□□□ 0.68
MMP9-201ENST00000372330 KIAA1586Q9HCI6 787 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 KANSL3Q9P2N6 904 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 PCDHA12Q9UN75 941 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 PCDHAC2Q9Y5I4 1007 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 TYROBPO43914 113 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 TGDSO95455 350 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 CDK4P11802 303 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 NPR1P16066 1061 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 ZNF24P17028 368 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 KRT15P19012 456 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 GRIA2P42262 883 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 PLOD1Q02809 727 aaPredicted RBP19.3■□□□□ 0.68
MMP9-201ENST00000372330 RBM26Q5T8P6 1007 aaKnown RBP19.3■□□□□ 0.68
MMP9-201ENST00000372330 KCNQ5Q9NR82 932 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 DCTN4Q9UJW0 460 aa19.3■□□□□ 0.68
MMP9-201ENST00000372330 GSTTP1A0A1W2PQM5 241 aa19.29■□□□□ 0.68
MMP9-201ENST00000372330 MARCH6O60337 910 aa19.29■□□□□ 0.68
MMP9-201ENST00000372330 AKAP3O75969 853 aa19.29■□□□□ 0.68
MMP9-201ENST00000372330 SLC1A5Q15758 541 aa19.29■□□□□ 0.68
MMP9-201ENST00000372330 ZFPM1Q8IX07 1006 aa19.29■□□□□ 0.68
MMP9-201ENST00000372330 GJA10Q969M2 543 aa19.29■□□□□ 0.68
MMP9-201ENST00000372330 MPHOSPH6Q99547 160 aaKnown RBP19.29■□□□□ 0.68
MMP9-201ENST00000372330 DNAJC12Q9UKB3 198 aa19.29■□□□□ 0.68
MMP9-201ENST00000372330 ATF5Q9Y2D1 282 aaPredicted RBP19.29■□□□□ 0.68
MMP9-201ENST00000372330 GREB1LQ9C091 1923 aaPredicted RBP19.29■□□□□ 0.68
MMP9-201ENST00000372330 VILLO15195 856 aa19.29■□□□□ 0.68
MMP9-201ENST00000372330 BUD23O43709 281 aaKnown RBP19.29■□□□□ 0.68
MMP9-201ENST00000372330 ZBED4O75132 1171 aa19.29■□□□□ 0.68
MMP9-201ENST00000372330 ADCY8P40145 1251 aa19.29■□□□□ 0.68
MMP9-201ENST00000372330 SYDE2Q5VT97 1194 aa19.29■□□□□ 0.68
MMP9-201ENST00000372330 CC2D2BQ6DHV5 1058 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms